REL PDBe PDBe PDBe 2012-03-29 2012-04-05 2012-07-16 2012-10-24 A 3-D cryo-electron microscopy structure of bacteriophage phi92 capsid Browning C Nazarov S Bowman V Leiman P Bacteriophage, phi92, capsid, single particle, cryo-electron, reconstruction Schwarzer D Buettner FF Browning C Nazarov S Rabsch W Bethe A Oberbeck A Bowman VD Stummeyer K Muhlenhoff M Leiman PG Gerardy-Schahn R A multivalent adsorption apparatus explains the broad host range of phage phi92: a comprehensive genomic and structural analysis. J.VIROL. 86 10384 10398 2012 22787233 doi:10.1128/JVI.00801-12 Bacteriophage phi92 Bacteriophage phi92 1 Staphylococcus phage 92
Bacteriophage phi92 is a large lytic myovirus
Staphylococcus phage 92 Escherichia coli BACTERIA(EUBACTERIA) 13 VIRION STRAIN false false bacteriophage phi92 singleParticle particle
50mM TrisCl pH 7.5, 100mM NaCl, 8mM MgSO4
 NEGATIVE
vitrification in liquid ethane
holey carbon grid
 ETHANE 100 113 HOMEMADE PLUNGER FEI/PHILIPS CM300FEG/T FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.0 2.0 3.5 33000.0 PHILIPS ROTATION HOLDER 2007-05-30 KODAK SO-163 FILM ZEISS SCAI 7 38 20
The icosahedral reconstruction the phi92 capsid was calculated from scratch. The initial model was constructed with a small subset of initial data. This model was then subjected to several rounds of refinement until convergence.
Each Micrograph
 I OTHER 19.0 FSC 0.5 CUT-OFF EMAN 1137 10 emd_2063.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 384 384 384 -192 -192 -192 384 384 384 1079.04 1079.04 1079.04 90.0 90.0 90.0 X Y Z -5.35246372 6.91830111 0.00000001 1.0 2.81 2.81 2.81 1.0 AUTHOR Reconstruction ofbacteriophage phi92 capsid
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 1OHG Chimera REAL