REL PDBe PDBe PDBe 2011-12-20 2012-01-31 2012-01-31 2013-03-13 The Cryo-EM Structure of the Archaeal 50S Ribosomal Subunit in Complex with Initiation Factor 6 Greber BJ Boehringer D Godinic-Mikulcic V Crnkovic A Ibba M Weygand-Durasevic I Ban N 50S ribosomal subunit, protein synthesis, initiation factor 6 Greber BJ Boehringer D Godinic-Mikulcic V Crnkovic A Ibba M Weygand-Durasevic I Ban N Cryo-EM structure of the archaeal 50S ribosomal subunit in complex with initiation factor 6 and implications for ribosome evolution. J.MOL.BIOL. 418 145 160 2012 22306461 doi:10.1016/j.jmb.2012.01.018 4adx FULLOVERLAP 50S ribosomal subunit in complex with archaeal initiation factor 6 50S ribosomal subunit in complex with archaeal initiation factor 6
none
Equimolar complex of 50S and aIF6 2 1.6 Methanothermobacter thermautotrophicus 50S ribosomal subunit false Methanothermobacter thermautotrophicus str. Delta H Cytoplasm 1.6 ribosome-prokaryote: LSU 50S, LSU RNA 23S, LSU RNA 5S aIF6 Methanothermobacter thermautotrophicus str. Delta H Cytoplasm 0.023 1 monomer false O27648 IPR002769 singleParticle particle 8.0
20 mM Tris-HCl pH 8, 20 mM MgCl2, 50 mM NH4Cl
 NEGATIVE
cryo
Quantifoil holey carbon grid R2/1
 ETHANE 80 HOMEMADE PLUNGER
Vitrification instrument: manual plunger
manual blotting FEI TECNAI 20 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 2.2 1.2 4.5 83000.0 GATAN LIQUID NITROGEN 87 GATAN ULTRASCAN 4000 (4k x 4k) 15 20 16. eucentric 0 0
per frame
 C1 OTHER 6.6 FSC 0.5 CUT-OFF Imagic-5, SPIDER 70364 emd_2012.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 180 180 180 0 0 0 180 180 180 325.8 325.8 325.8 90.0 90.0 90.0 X Y Z -201.715789790000002 276.055297849999988 -10.795081140000001 22.579296110000001 1.81 1.81 1.81 30.0 AUTHOR Structure of the M. thermautotrophicus 50S-aIF6 complex
::::EMDATABANK.org::::EMD-2012::::
 3CC2 RIGID BODY FIT Chimera
Protocol: rigid body
correlation REAL 3O58 RIGID BODY FIT Chimera
Protocol: rigid body
correlation REAL 4A17 RIGID BODY FIT Chimera
Protocol: rigid body
correlation REAL 4A19 RIGID BODY FIT Chimera
Protocol: rigid body
correlation REAL emd_2012_msk_1.map emd_2012_msk_1.map 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 180 180 180 -89 -90 -90 180 180 180 325.8 325.8 325.8 90.0 90.0 90.0 X Y Z 0.0 1.0 0.2740379 0.0 1.81 1.81 1.81 NONE
3D TEST-IMAGE SPHERICALLY SYMMETRIC BLOB // Created by IMAGIC: IMAGIC image = sphere 13-10-20 16:10:37 // // Created by IMAGIC: CCP4 image = sphere.ccp4 13-10-20 15:15:22 //