REL PDBe PDBe PDBe 2011-10-26 2011-11-18 2012-01-20 2012-02-23 3D structure of the Yersinia entomophaga toxin complex and implications for insecticidal activity Landsberg MJ Jones SA Rothnagel R Busby JN Marshall SDG Simpson RM Lott JS Hankamer B Hurst MRH toxin complex, bacterial toxin, bioinsecticide Landsberg MJ Jones SA Rothnagel R Busby JN Marshall SD Simpson RM Lott JS Hankamer B Hurst MR 3D structure of the Yersinia entomophaga toxin complex and implications for insecticidal activity. PROC.NAT.ACAD.SCI.USA 108 20544 20549 2011 22158901 doi:10.1073/pnas.1111155108 Busby JN Landsberg MJ Simpson RM Jones SA Hankamer B Hurst MR Lott JS Structural Analysis of Chi1 Chitinase from Yen-Tc: The Multisubunit Insecticidal ABC Toxin Complex of Yersinia entomophaga J.MOL.BIOL. 415 359 371 2012 22108167 doi:10.1016/J.JMB.2011.11.018 4a5q FULLOVERLAP Insecticidal Tc from Yersinia entomophaga strain MH96 (deletion construct 9)(aka Yen-Tc K9) Insecticidal Tc from Yersinia entomophaga strain MH96 (deletion construct 9)(aka Yen-Tc K9)
Sample was monodisperse
20mer comprising 5 A1, 5 A2, 5 Chi1 and 5 Chi2 subunits respectively. 4 2.1 2.1 Dynamic light scattering Yen-Tc A1 subunit Yersinia entomophaga MH96::9 Secreted 0.13 5 Pentamer false Yen-Tc A2 subunit Yersinia entomophaga MH96::9 Secreted 0.156 5 Pentamer false Chi1 Yersinia entomophaga MH96::9 Secreted 0.06 5 Pentamer false Chi2 Yersinia entomophaga MH96::9 Secreted 0.07 5 Pentamer false singleParticle particle 0.1 7.5
25 mM Tris, 130 mM NaCl
 NEGATIVE
Protein pre-absorbed onto carbon-coated grids and stained with 0.75% uranyl formate.
400 mesh Cu grids
 NONE OTHER FEI TECNAI F30 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.0 0.9 0.95 59000.0 SIDE ENTRY, EUCENTRIC 295 objective lens astigmatism was corrected at 93,000 times magnification 2009-06-02 GATAN ULTRASCAN 4000 (4k x 4k) 300 80 FEI single tilt 0 0
Particles were selected using semi-automated particle selection (SwarmPS,e2boxer.py)
C5 OTHER 17.0 FSC 0.5 CUT-OFF Xmipp, EMAN 10604 403 emd_1978.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 180 180 180 -108 -108 -108 180 180 180 702 702 702 90 90 90 X Y Z -11.993600000000001 13.0684 0.00000000175681 0.871901 3.9 3.9 3.9 6.13 AUTHOR SPA map of Y.entomophaga MH96(deletion construct 9) insecticidal Tc (Yen-Tc K9).
::::EMDATABANK.org::::EMD-1978::::
 3OA5 A RIGID BODY FIT SITUS
PDBEntryID_givenInChain. Protocol: Rigid Body. Colores was used to perform an exhaustive 6d search. A Laplacian filter was used to emphasise correct contour fitting.
Cross-correlation coefficient REAL 22.09