<emd xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" emdb_id="EMD-1977" version="3.0.1.1" xsi:schemaLocation="https://github.com/emdb-empiar/emdb-schemas/blob/master/v3/v3_0_1_1/emdb_relaxed.xsd">
   <admin>
      <current_status>
         <code>REL</code>
         <processing_site>PDBe</processing_site>
      </current_status>
      <sites>
         <deposition>PDBe</deposition>
         <last_processing>PDBe</last_processing>
      </sites>
      <key_dates>
         <deposition>2011-10-17</deposition>
         <header_release>2011-10-21</header_release>
         <map_release>2011-12-16</map_release>
         <update>2012-05-03</update>
      </key_dates>
      <title>Extracellular complexes of the hematopoietic human and mouse CSF-1 receptor are driven by common assembly principles.</title>
      <authors_list>
         <author>Elegheert J</author>
         <author>Desfosses A</author>
         <author>Shkumatov AV</author>
         <author>Wu X</author>
         <author>Bracke N</author>
         <author>Verstraete K</author>
         <author>Van Craenenbroeck K</author>
         <author>Brooks BR</author>
         <author>Svergun DI</author>
         <author>Vergauwen B</author>
         <author>Gutsche I</author>
         <author>Savvides SN</author>
      </authors_list>
      <keywords>Hematopoiesis, Receptor Tyrosine Kinase (RTK), Colony-Stimulating Factor-1, CSF-1, CSF-1R,  ternary complex, ectodomain complex, cytokine-receptor complex</keywords>
   </admin>
   <crossreferences>
      <citation_list>
         <primary_citation>
            <journal_citation published="true">
               <author order="1">Elegheert J</author>
               <author order="2">Desfosses A</author>
               <author order="3">Shkumatov AV</author>
               <author order="4">Wu X</author>
               <author order="5">Bracke N</author>
               <author order="6">Verstraete K</author>
               <author order="7">Van Craenenbroeck K</author>
               <author order="8">Brooks BR</author>
               <author order="9">Svergun DI</author>
               <author order="10">Vergauwen B</author>
               <author order="11">Gutsche I</author>
               <author order="12">Savvides SN</author>
               <title>Extracellular complexes of the hematopoietic human and mouse CSF-1 receptor are driven by common assembly principles.</title>
               <journal>STRUCTURE</journal>
               <volume>19</volume>
               <first_page>1762</first_page>
               <last_page>1772</last_page>
               <year>2011</year>
               <external_references type="PUBMED">22153499</external_references>
               <external_references type="DOI">doi:10.1016/j.str.2011.10.012</external_references>
            </journal_citation>
         </primary_citation>
      </citation_list>
   </crossreferences>
   <sample>
      <name>Complex of human Colony-Stimulating Factor-1 (hCSF-1) with the complete ectodomain of hCSF-1R</name>
      <supramolecule_list>
         <sample_supramolecule supramolecule_id="1000">
            <name>Complex of human Colony-Stimulating Factor-1 (hCSF-1) with the complete ectodomain of hCSF-1R</name>
            <details>The sample was monodisperse</details>
            <oligomeric_state>Dimeric</oligomeric_state>
            <number_unique_components>2</number_unique_components>
            <molecular_weight>
               <experimental units="MDa">0.145</experimental>
               <theoretical units="MDa">0.145</theoretical>
               <method>Multi-angle laser light scattering</method>
            </molecular_weight>
         </sample_supramolecule>
      </supramolecule_list>
      <macromolecule_list>
         <protein_or_peptide macromolecule_id="1">
            <name synonym="CSF-1R">Colony Stimulating Factor-1 Receptor (CSF-1R)</name>
            <natural_source database="NCBI">
               <organism ncbi="9606">Homo sapiens</organism>
               <synonym_organism>Human</synonym_organism>
            </natural_source>
            <molecular_weight>
               <experimental units="MDa">0.076</experimental>
               <theoretical units="MDa">0.076</theoretical>
            </molecular_weight>
            <number_of_copies>1</number_of_copies>
            <oligomeric_state>Monomer</oligomeric_state>
            <recombinant_exp_flag>true</recombinant_exp_flag>
            <recombinant_expression database="NCBI">
               <recombinant_organism>Homo sapiens, HEK293T cell line</recombinant_organism>
               <recombinant_plasmid>pHLSec</recombinant_plasmid>
            </recombinant_expression>
            <sequence>
               </sequence>
         </protein_or_peptide>
         <protein_or_peptide macromolecule_id="2">
            <name synonym="CSF-1">Colony Stimulating Factor-1</name>
            <natural_source database="NCBI">
               <organism ncbi="9606">Homo sapiens</organism>
               <synonym_organism>Human</synonym_organism>
            </natural_source>
            <number_of_copies>2</number_of_copies>
            <oligomeric_state>Monomer</oligomeric_state>
            <recombinant_exp_flag>true</recombinant_exp_flag>
            <recombinant_expression database="NCBI">
               <recombinant_organism>Homo sapiens, HEK293T cell line</recombinant_organism>
               <recombinant_plasmid>pHLSec</recombinant_plasmid>
            </recombinant_expression>
            <sequence>
               </sequence>
         </protein_or_peptide>
      </macromolecule_list>
   </sample>
   <structure_determination_list>
      <structure_determination structure_determination_id="1">
         <method>singleParticle</method>
         <aggregation_state>particle</aggregation_state>
         <specimen_preparation_list>
            <single_particle_preparation preparation_id="1">
               <buffer>
                  <ph>7.5</ph>
                  <details>20 mM NaPO4 pH 7.40, 150 mM NaCl.</details>
               </buffer>
               <staining>
                  <type>NEGATIVE</type>
                  <details>Purified sample at 0.2 mg/mL in PBS buffer was applied to the clear side of carbon on a carbon-mica interface and stained by floating on 2 % (w/v) uranyl acetate.</details>
               </staining>
               <vitrification>
                  <cryogen_name>NONE</cryogen_name>
                  <instrument>OTHER</instrument>
               </vitrification>
            </single_particle_preparation>
         </specimen_preparation_list>
         <microscopy_list>
            <single_particle_microscopy microscopy_id="1">
               <microscope>JEOL 1200EXII</microscope>
               <illumination_mode>OTHER</illumination_mode>
               <imaging_mode>OTHER</imaging_mode>
               <electron_source>TUNGSTEN HAIRPIN</electron_source>
               <acceleration_voltage units="kV">100</acceleration_voltage>
               <nominal_cs units="mm">2.1</nominal_cs>
               <nominal_magnification>40000.0</nominal_magnification>
               <specimen_holder_model>JEOL</specimen_holder_model>
               <image_recording_list>
                  <image_recording>
                     <film_or_detector_model category="FILM">KODAK SO-163 FILM</film_or_detector_model>
                     <digitization_details>
                        <scanner>ZEISS SCAI</scanner>
                        <sampling_interval units="&#181;m">14</sampling_interval>
                     </digitization_details>
                     <bits_per_pixel>8.</bits_per_pixel>
                  </image_recording>
               </image_recording_list>
               <specimen_holder>Jeol</specimen_holder>
            </single_particle_microscopy>
         </microscopy_list>
         <singleparticle_processing image_processing_id="1">
            <ctf_correction>
               <details>CTFFIND3. Each particle</details>
            </ctf_correction>
            <final_reconstruction>
               <applied_symmetry>
                  <point_group>C2</point_group>
               </applied_symmetry>
               <algorithm>OTHER</algorithm>
               <resolution res_type="BY AUTHOR" units="&#8491;">23.0</resolution>
               <resolution_method>FSC 0.5 CUT-OFF</resolution_method>
               <software_list>
                  <software>
                     <name>IMAGIC, SPIDER</name>
                  </software>
               </software_list>
               <number_images_used>9421</number_images_used>
            </final_reconstruction>
         </singleparticle_processing>
      </structure_determination>
   </structure_determination_list>
   <map format="CCP4" size_kbytes="2001">
      <file>emd_1977.map.gz</file>
      <symmetry>
         <space_group>1</space_group>
      </symmetry>
      <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
      <dimensions>
         <col>80</col>
         <row>80</row>
         <sec>80</sec>
      </dimensions>
      <origin>
         <col>0</col>
         <row>0</row>
         <sec>0</sec>
      </origin>
      <spacing>
         <x>80</x>
         <y>80</y>
         <z>80</z>
      </spacing>
      <cell>
         <a units="&#8491;">280.0</a>
         <b units="&#8491;">280.0</b>
         <c units="&#8491;">280.0</c>
         <alpha units="deg">90.0</alpha>
         <beta units="deg">90.0</beta>
         <gamma units="deg">90.0</gamma>
      </cell>
      <axis_order>
         <fast>X</fast>
         <medium>Y</medium>
         <slow>Z</slow>
      </axis_order>
      <statistics>
         <minimum>-0.03322909</minimum>
         <maximum>0.22371151</maximum>
         <average>-0.0002531</average>
         <std>0.00919499</std>
      </statistics>
      <pixel_spacing>
         <x units="&#8491;">3.5</x>
         <y units="&#8491;">3.5</y>
         <z units="&#8491;">3.5</z>
      </pixel_spacing>
      <contour_list>
         <contour primary="true">
            <level>0.01</level>
            <source>EMDB</source>
         </contour>
      </contour_list>
      <annotation_details>Surface rendering of the hCSF-1RD1-D5 hCSF-1 complex</annotation_details>
      <details>::::EMDATABANK.org::::EMD-1977::::</details>
   </map>
</emd>