REL PDBe PDBe PDBe 2011-08-11 2011-08-26 2012-08-22 2012-10-24 Feline Calicivirus strain F9 decorated with Junctional Adhesion Molecule A Bhella D Goodfellow IG feline, calicivirus, virus, virion, junctional adhesion molecule Bhella D Goodfellow IG The cryo-electron microscopy structure of feline calicivirus bound to junctional adhesion molecule A at 9-angstrom resolution reveals receptor-induced flexibility and two distinct conformational changes in the capsid protein VP1. J.VIROL. 85 11381 11390 2011 21865392 doi:10.1128/JVI.05621-11 Feline Calicivirus decorated with junctional adhesion molecule A Feline Calicivirus decorated with junctional adhesion molecule A T3 icosahedral capsid 2 16 Feline calicivirus Feline calicivirus Felis catus VERTEBRATES 10.7 VP1 415 3 VIRION STRAIN false false Junctional Adhesion Molecule A Felis catus Domestic cat 0.029
Virus was incubated in the presence of a soluble fragment of fJAM-A at 4oC for one hour
180 Monomer true Cricetulus griseus pDEF:fJAM:Fc singleParticle particle 7.4
PBS
400 mesh R2/2 C-flat
 ETHANE 100 OTHER
Vitrification instrument: Vitrobot
Blot for five seconds before plunging JEOL 2200FS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 2.0 0.8 3.5 100000.0 GATAN LIQUID NITROGEN 97 corrected at 100k times mag in digital micrograph JEOL 0.0 20.0 GATAN ULTRASCAN 4000 (4k x 4k) 10 Side entry
each particle corrected using bsoft
 I OTHER 12.3 FSC 0.5 CUT-OFF em3dr2
12,422 particle images were subjected to a model based sorting protocol to separate them according to the extent of conformational change they had undergone following fJAM-A binding
1509 emd_1947.map.gz 1 IMAGE STORED AS SIGNED INTEGER (2 BYTES) 299 299 299 -149 -149 -149 299 299 299 615.94 615.94 615.94 90.0 90.0 90.0 X Y Z -361.0 412.0 2.26144886 54.88690948 2.06 2.06 2.06 43.0 AUTHOR Three-dimensional reconstruction of feline calicivirus decorated with junctional adhesion molecule post-conformational change
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