2024-08-21 REL PDBe PDBe PDBe 2024-01-11 2024-08-07 2024-08-07 2024-08-21 European Research Council (ERC) European Union Vorlaender MK Rothe P Plaschka C pre-mRNA splicing, intron lariat spliceosome, gene expression, spliceosome, splicing Vorlander MK Rothe P Kleifeld J Cormack ED Veleti L Riabov-Bassat D Fin L Phillips AW Cochella L Plaschka C Nature UK 632 443 450 2024 38925148 doi:10.1038/s41586-024-07741-1 1476-4687 0006 NATUAS EMD-50463 consensus EM volume EMD-50449 focused EM volume EMD-50450 focused EM volume EMD-50451 focused EM volume EMD-50452 focused EM volume EMD-50453 focused EM volume EMD-50454 focused EM volume EMD-50464 focused EM volume EMD-50465 focused EM volume EMD-50466 focused EM volume EMD-50467 focused EM volume EMD-50468 focused EM volume EMD-50469 focused EM volume EMD-50471 focused EM volume EMD-50472 focused EM volume EMD-50473 focused EM volume EMD-50475 focused EM volume EMD-50474 focused EM volume 8ro1 FULLOVERLAP Intron lariat spliceosome (ILS'') Intron lariat spliceosome (ILS'') 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 Caenorhabditis elegans U2 snRNA Caenorhabditis elegans 0.068422445

Full sequence: AUCGCUUCUUCGGCUUAUUAGCUAAGAUCAAAGUGUAGUAUCUGUUCUUAUCGUAUUAACCUACGGUAUACACUCGAAUGAGUGUAAUAAAGGUUAUAUGAUUUUUGGAACCUAGGGAAGACUCGGGGCUUGCUCCGACUUCCCAAGGGUCGUCCUGGCGUUGCACUGCUGCCGGGCUCGGCCCAGUCCCC

1 AUCGCUUCUUCGGCUUAUUAGCUAAGAUCAAAGUGUAGUAUCUGUUCUUAUCGUAUUAACCUACGGUAUACACUCGAAUG AGUGUAAUAAAGGUUAUAUGAUUUUUGGAACCUAGGGAAGACUCGGGGCUUGCUCCGACUUCCCAAGGGUCGUCCUGGCG UUGCACUGCUGCCGGGCUCGGCCCAGUCCCC(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N) (N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N) U5 snRNA Caenorhabditis elegans 0.035826145 1 ACUCUGGUUCCUCUGCAUUUAACCGUGAAAAUCUUUCGCCUUUUACUAAAGAUUUCCGUGCAAAGGAGCAUACAUUGAGU ACAAUUUUUGGAGUCCCCUCGAGAGAGCGGGA U6 snRNA Caenorhabditis elegans 0.032483355 1 GUUCUUCCGAGAACAUAUACUAAAAUUGGAACAAUACAGAGAAGAUUAGCAUGGCCCCUGCGCAAGGAUGACACGCAAAU UCGUGAAGCGUUCCAAAUUUU Pre-mRNA-splicing factor 8 homolog Caenorhabditis elegans 0.272396156 1 LEVO MANYGGHPQTEPHAIPDSILEEKSRKWKQLQGKRYSEKKKFGMSDTQKEEMPPEHVRKVIRDHGDMTSRKYRHDKRVYLG ALKYMPHAVLKLLENMPMPWEQIRDVKVLYHITGAITFVNDIPRVIEPVYMAQWGTMWIMMRREKRDRRHFKRMRFPPFD DEEPPLDYADNILDVEPLEPIQMELDPEEDGAVAEWFYDHKPLATTRFVNGPTYRKWAFSIPQMSTLYRLANQLLTDLVD DNYFYLFDMKSFFTAKALNVAIPGGPKFEPLVKDLHTDEDWNEFNDINKVIIRAPIRTEYRIAFPFMYNNLISSLPVQVS WYHTPSVVFIKTEDPDLPAFYYDPLINPIVLSNLKATEENLPEGEEEDEWELPEDVRPIFEDVPLYTDNTANGLALLWAP RPFNLRSGRTRRAVDVPLVKSWYREHCPAGMPVKVRVSYQKLLKVFVLNALKHRPPKPQKRRYLFRSFKATKFFQTTTLD WVEAGLQVLRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDAHVQYRLNN VDAYQLADGLQYIFAHVGQLTGMYRYKYKLMRQVRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFLRGITPLL ERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPDGIKQNKARVILQHLSEAWRCWKANIPWKV PGLPTPVENMILRYVKAKADWWTNSAHYNRERVRRGATVDKTVCKKNLGRLTRLYLKSEQERQHNYLKDGPYISAEEAVA IYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKESYSVKNRLNQSQREELALIEQAYDNPHEALSRIKRHMLTQ RAFKEVGIEFMDLYTHLIPVYDIEPLEKVTDAYLDQYLWYEADKRRLFPAWVKPGDTEPPPLLTYKWCQGLNNLQDVWET SEGECNVIMETKLEKIAEKMDLTLLNRLLRLIVDHNIADYMTSKNNVLINYKDMNHTNSFGIIRGLQFASFIVQFYGLVL DLLVLGLRRASEIAGPPQCPNEFLQFQDVATEIGHPIRLYCRYIDRVWIMFRFSADEARDLIQRYLTEHPDPNNENIVGY NNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSITTVEWENSFVSVYSKDNPNMLFDMSGFECRILPKCRTANEEFV HRDGVWNLQNEVTKERTAQCFLKVDEESLSKFHNRIRQILMSSGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLL VKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKEIGGLGMLSMGHVLIPQSDLRWMQQTEAGGVTHFRSGMSHDEDQLIPN LYRYIQPWEAEFVDSVRVWAEYALKRQEANAQNRRLTLEDLDDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFKAYQI LKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFRGTYFPTWEGLFWERASGFEESMKFKKLTNAQRSGLN QIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIQ TVQKETIHPRKSYKMNSSCADVLLFAQYKWNVSRPSLMADSKDVMDNTTTQKYWLDVQLRWGDYDSHDVERYARAKFLDY TTDNMSIYPSPTGVLIAIDLAYNLYSAYGNWFPGMKPLIRQAMAKIIKANPAFYVLRERIRKGLQLYSSEPTEPYLTSQN YGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLSQLAKWKTAEEVAA LIRSLPVEEQPRQIIVTRKAMLDPLEVHLLDFPNIVIKGSELMLPFQAIMKVEKFGDLILKATEPQMVLFNLYDDWLKTI SSYTAFSRVVLIMRGMHINPDKTKVILKPDKTTITEPHHIWPTLSDDDWIKVELALKDMILADYGKKNNVNVASLTQSEV RDIILGMEISAPSQQRQQIADIEKQTKEQSQVTATTTRTVNKHGDEIITATTSNYETASFASRTEWRVRAISSTNLHLRT QHIYVNSDDVKDTGYTYILPKNILKKFITISDLRTQIAGFMYGVSPPDNPQVKEIRCIVLVPQTGSHQQVNLPTQLPDHE LLRDFEPLGWMHTQPNELPQLSPQDVTTHAKLLTDNISWDGEKTVMITCSFTPGSVSLTAYKLTPSGYEWGKANTDKGNN PKGYMPTHYEKVQMLLSDRFLGYFMVPSNGVWNYNFQGQRWSPAMKFDVCLSNPKEYYHEDHRPVHFHNFKAFDDPLGTG SADREDAFA P34369 Tr-type G domain-containing protein Caenorhabditis elegans 0.110612859 1 LEVO MDSDLYDEFGNYIGPELDSDDDAGDIDDNGDDEDRSDVDEDDEPDRMEEDDAEEIPQNQVVLHEDKKYYATALEVYGEGV ETLVQEEDAQPLTEPIVKPVSKKKFQAAERFLPETVYKKEYLADLMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQTHPEF YRAEDADARFTDILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEGVMM NTERAIRHAIQERLAVTLCISKIDRLLLELKLPPADAYFKLRLIIDQVNNILSTFAEEDVPVLSPLNGNVIFSSGRYNVC FSLLSFSNIYAKQHGDSFNSKEFARRLWGDIYFEKKTRKFVKKSPSHDAPRTFVQFILEPMYKIFSQVVGDVDTCLPDVM AELGIRLSKEEQKMNVRPLIALICKRFFGDFSAFVDLVVQNIKSPLENAKTKIEQTYLGPADSQLAQEMQKCNAEGPLMV HTTKNYPVDDATQFHVFGRVMSGTLEANTDVRVLGENYSIQDEEDCRRMTVGRLFVRVASYQIEVSRVPAGCWVLIEGID QPIVKTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSELPKMLDGLRKVNKSYPLLTTRVEESGEHVLLGTGEFY MDCVMHDMRKVFSEIDIKVADPVVTFNETVIETSTLKCFAETPNKKNKITMMAEPLEKQLDEDIENEVVQIGWNRRRLGE FFQTKYNWDLLAARSIWAFGPDTTGPNILLDDTLPSEVDKHLLSTVRESLVQGFQWATREGPLCEEPIRQVKFKLLDAAI ATEPLYRGGGQMIPTARRCAYSAFLMATPRLMEPYYTVEVVAPADCVAAVYTVLAKRRGHVTTDAPMPGSPMYTISAYIP VMDSFGFETDLRIHTQGQAFCMSAFHHWQLVPGDPLDKSIVIKTLDVQPTPHLAREFMIKTRRRKGLSEDVSVNKFFDDP MLLELAKQQDYTGF Q23463 Protein isy-1 Caenorhabditis elegans 0.031326172 1 LEVO MARNAEKAMTALARWRRMKEEEERGPIARRPHDVKDCRNLSDAERFRREIVRDASKKITAIQNPGLGEFKLRDLNDEVNR LIKLKHAWEQRIRELGGTDYRKYAQKELDAIGRETGNSRGYKYFGAAKDLPGVRELFEKSTEGEEQRRHRADLLRNIDAH YFGYLDDEDGRLIPLEKLIEEKNIERINKEFAEKQAQKQQTASDAAPENIYKVEEDDDDDLETQESTVIGEDGRPMTIRH VLLPTQQDIEEMLLEQKKQELMAKYLD Q20716 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 Caenorhabditis elegans 0.084495477 1 LEVO MSSRHRLDLDGSGRGDRRRSPNRRSRSRSRSPHRRSSPDRKRQIGAVGNMKIQINPYNNQPFSNRYWAIWEKRSQLPVWE YKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVACTQPRRVAAMSVATRVAEEMDVVLGQE VGYSIRFEDCISERTVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLD AGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQAL GADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESL LVCPISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETL MRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAKAR FAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAG FFMQVAHLERSGHYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDT KRKLTTVMQTLQRNAGRGY Q20875 3.6.4.13 WD_REPEATS_REGION domain-containing protein Caenorhabditis elegans 0.036865559 1 LEVO MALVTSSGQQLVSSGFPQQTAQRFSNLMAPTMVLLGHEGEIYTGAFSPDGTCLATSGYDQKIFFWNVYGECENFSTIKGH SGAVMDLKFTTDSSSLVSCGTDKSVRVWDMETGTCARRFRTHTDFVNAVHPSRRGVTLVASASDDGTCRVHDMRTKEPVK TYTNRYQQTAVTFNDSSDQVISGGIDNVLKVWDMRRDEITYTLTGHRDTITGISLSPSGKFIISNSMDCTVRQWDIRPFV PGQRSVGVFAGHNHNFEKNLLKCSWSPCERFITAGSSDRFLYVWETLSKKIVYKLPGHMGSVNCTDFHPKEPIMLSCGSD KRVFLGEIDMS Q19211 Pre-mRNA-splicing factor SYF1 Caenorhabditis elegans 0.09967509399999999 1 LEVO MADKENATKIEKMPNSETMKGISSEDVPFEEDIIRNPTSVNCWQRYIDHKLQNKSPAKQMFLIYERALAVFERSYKLWYH YLKYRESTIVNKCPTDNSWRALCDTYERCLMRLHKMPRIWICYCEVMIKRGLITETRRVFDRALRSLPVTQHMRIWTLYI GFLTSHDLPETTIRVYRRYLKMNPKAREDYVEYLIERDQIDEAAKELTTLVNQDQNVSEKGRTAHQLWTQLCDLISKNPV KIFSLNVDAIIRQGIYRYTDQVGFLWCSLADYYIRSAEFERARDVYEEAIAKVSTVRDFAQVYDAYAAFEEREVSIMMQE VEQSGDPEEEVDLEWMFQRYQHLMERKNELMNSVLLRQNPHNVGEWLNRVNIYEGNYNKQIETFKEAVKSVNPKIQVGKV RDLWIGLAKLYEDNGDLDAARKTFETAVISQFGGVSELANVWCAYAEMEMKHKRAKAALTVMQRACVVPKPGDYENMQSV QARVHRSPILWAMYADYEECCGTVESCRKVYDKMIELRVASPQMIMNYAMFLEENEYFELAFQAYEKGIALFKWPGVFDI WNTYLVKFIKRYGGKKLERARDLFEQCLENCPPTHAKYIFLLYAKLEEEHGLARHALSIYNRACSGVDRADMHSMYNIYI KKVQEMYGIAQCRPIFERAISELPEDKSRAMSLRYAQLETTVGEIDRARAIYAHAAEISDPKVHVKFWDTWKNFEVAHGN EATVRDMLRVRRSVEASYNVNVTLTSVQMRVDAERKAQETTTSSNPMDSLDQQQQQPSDGAGSITQVSMNKGNISFVRGA GKTVQQNTTENPDEIDLDEDDDDEEDDGGDADISVKVVPAQIFGNLKLAEEEEEA P91175 Intron lariat RNA Caenorhabditis elegans 0.010348173 1 GU(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N) (N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)(N)A(N)(N)(N) TPR_REGION domain-containing protein Caenorhabditis elegans 0.088116 1 LEVO MSDDEAAVPGNKPIRLPKKAAKVKNKAPAQLQITAEQLLREAKERELELIPPAPKTKITDPDELKEYQRKKRKEFEDGIR KNRMQLANWIKYGKWEESIGEIQRARSVFERALDVDHRSISIWLQYAEMEMRCKQINHARNVFDRAITIMPRAMQFWLKY SYMEEVIENIPGARQIFERWIEWEPPEQAWQTYINFELRYKEIDRARSVYQRFLHVHGINVQNWIKYAKFEERNGYIGNA RAAYEKAMEYFGEEDINETVLVAFALFEERQKEHERARGIFKYGLDNLPSNRTEEIFKHYTQHEKKFGERVGIEDVIISK RKTQYEKMVEENGYNYDAWFDYLRLLENEETDREEVEDVYERAIANIPPHSEKRYWRRYIYLWINYALYEELVAKDFDRA RQVYKACIDIIPHKTFTFAKVWIMFAHFEIRQLDLNAARKIMGVAIGKCPKDKLFRAYIDLELQLREFDRCRKLYEKFLE SSPESSQTWIKFAELETLLGDTDRSRAVFTIAVQQPALDMPELLWKAYIDFEIACEEHEKARDLYETLLQRTNHIKVWIS MAEFEQTIGNFEGARKAFERANQSLENAEKEERLMLLEAWKECETKSGDQEALKRVETMMPRRVKKRRQIQTEDGVDAGW EEYFDYIFPQDQAAKGSFKLLEAAARWKREREEAAARAAQELDAPIPEGDDDEEKEEAGKDAEEKVREGDSDTDLSESSS SSDSESSSSSSSDSSDSSDDDEDK O16376 Pre-mRNA-splicing factor SPF27 Caenorhabditis elegans 0.027679884999999998 1 LEVO MSSKPLALTGGSGSSQLQDDQVLVDALPYLDTEYNEADRQLAMKLVEHECKTFRPTKNYLTHLPVPDYDAFLTKCMLKEM DRMKKKEEMGKLDMSRCELPAPSAVKGVDRKLWAKVLRNAKAQNEHLLMRQINLELMDEYAAESYLQRNKVMEDLLTHAE KELRKTKEAVMEVHANRKMAQLKAGEKVKQLEQSWVSMVTNNYRMEMENRQIDSDNRKQIKALKLDPTKLDDKEDQEN Q22417 Cell division cycle 5-like protein Caenorhabditis elegans 0.08584346899999999 1 LEVO MVRVIIKGGVWKNTEDEILKAAIMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPGIKKTEWSREEDEKLLHLAKLMPT QWRTIAPIVGRTSAQCLERYEHLLDEAQRKAEGLDEEATETRKLKPGEIDPTPETKPARPDPIDMDDDELEMLSEARARL ANTQGKKAKRKARERQLSDARRLASLQKRREMRAAGLAFARKFKPKRNQIDYSEEIPFEKHVPAGFHNPSEDRYVVEDAN QKAIEDHQKPRGREIEMEMRREDREKLKKRKEQGEADAVFNIKEKKRSKLVLPEPQISDRELEQIVKIGHASDSVRQYID GTATSGLLTDYTESARANAVAARTMRTPMLKDTVQLELENLMALQNTESALKGGLNTPLHESELGKGVLPTPKVAATPNT VLHAIAATPGTQSQFPGSTPGGFATPAGSVAATPFRDQMRINEEIAGSALEQKASLKRALASLPTPKNDFEVVGPDDDEV EGAVEDESNQDEDGWIEDASERAENKAKRNAENRVRNMKMRSQVIQRSLPKPTKVNEQATRATNSSADDMVKAEMSKLLA WDVDNKPPSVIYSREELDAAADLIKQEAESGPELNSLMWKVVEQCTSEIILSKDKFTRIAILPREEQMKALNDEFQMYRG WMNQRAKRAAKVEKKLRVKLGGYQAIHDKLCKKYQEVTTEIEMANIEKKTFERLGEHELKAINKRVGRLQQEVTTQETRE KDLQKMYSKLSNKQWKLSQIEIHDAASTTSAPITY G5EFC4 CWF19-like protein 1 homolog Caenorhabditis elegans 0.059034897999999995 1 LEVO MATQQAKILCCGDVNGNFVELIKKISTTEKKNGPFDSLFCVGEFFGDDDDSNEKVINGNIEFPIPTYILGPANPRYSYLY PEESIEFSSNLTYLGKKGLLNTASGLQIAYLSGVEGSSKDLSCFDKADVEELLIPLGTQVGFSGTDILLTSVWPADIARH SHNQPSKPQPGSVLLSKLAAHLKPRYHFAGLGVHYERQPYRNHRVLLEPARHTTRFIGLAAIGNPEKQKWLYACNVKPMR KMEKEELTAQPPNASEFPYRELLEEIAAKETLSRMNGNGQRPEGSQYRFEMGGAEDGAGNGRKRHNDGGNDGPRNKQPVG PCWFCLSNVDAEKHLVVAIGNKCYAAMPKGPLTEDHVMVLSVGHIQSQVSAPVEVRDEIEKFKSAFTLMANKQGKALVTF ERNFRTQHLQVQMVMIDKSSSKALKSSFTTAAACAGFELVTMGPDESLLDMVNEGCPYFVAELPDGSKLFTRSMKGFPLH FGREVLASTPILDCEDKVDWKACVLAKEKEVELVNKLKSDFKPFDFTAEDDSD O16216 CWF19-like protein 2 homolog Caenorhabditis elegans 0.053269211000000004 1 LEVO MFRRPDDDDDDYSGRKVIKPKPIAEKYAKKLGSEFSTGKTFVTGSDKSQKDFYGSQQVRNDVMKSSDSGGAPLTEDEKNK LSAKILKAEMKGDTDLVKKLKRKLESGISGDDEPPKSKSKEVTMMRRDREGNILPASSRRSDSDRHGEGSSRMRREYEKS QDLDSMVREEKTGTAGDQLRLFERSLIKSSKIRRHDDESVDDIAEMQKGKKKSDEKDKKRKEKESIKEHKRIERSFDDCS RCIDSSRLKKHNIIAVGINTYLAVVEWDGLDDEHLIIVPTQHCSSTIQLDENVWDEMRLWRKGLVAVWKSQNRDCIFFEM SRHVDSNPHVFIECVPVEQEIGDMASIYFKKAINECEGEYMDNKKLIETKDLRRQIPKGFSYFAVDFGLSNGFAHVIESH DHFPSTFATEIIAGMLDLPPKKWRKRETDEMSKQKSRAENFKKLWEPVDWTKRLKNDSTK Q10946 Pre-mRNA-splicing factor syf-2 Caenorhabditis elegans 0.027719021 1 LEVO MSSESQSSSSGPSSSGSKMKDFNQRFRDLHKLRQRARKENHEQVVEEDRRSKLPKNHEAKKERDQWQVKELQDRKAAEDK GLDYERVRSLEMSADVTEKLEQKRKRKKNPDQGFTSYEDMTLRQHTRLTAALDPDLDSYKKMRECVGGEQFYPTADTLIH GNHYPTTAAMDKLTKDVHGQVKRREQYHRRRLYDPDAPIDYINEKNKKFNKKLDKYYGKYTEDIKDDLERGTAI Q09385 Protein BUD31 homolog Caenorhabditis elegans 0.017153879 1 LEVO MSLATKLRRVRKSPPEGWDLIEPTLEQFEAKMREAETEPHEGKRKTEINWPIFRIHHQRSRYVYDMYYKKAEISRELYEF CLTAKFADAALIAKWKKQGYENLCCVKCVNTRDSNFGTACICRVPKSKLDAERVIECVHCGCHGCSG P34313 Pre-mRNA-splicing factor RBM22 Caenorhabditis elegans 0.04590275 1 LEVO MSMSKSSYSQYNRKNWEDSDFPILCETCLGNNPYMRMMKDKYGRECKICERPFTTFRWQPGKGARYKNTELCQTCAKVKN VCQTCMFDLEYGLPVQVRDHELQIADNIPKQGANRDFFLQNVERTLGQGDGTQPIAQIANNMDQAAHDRLRRMGRTQPYY KRNAPHICSFFVKGECKRGEECPYRHEKPTDPDDPLSRQNIRDRYYGTNDPVAEKILNRAAAAPTLSPPADTTITTLYIG NLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTEKGCAFIEFTTREAAERAAERSFNKTFIKGKRLTIRWGEPQAKRAADN SNYVTPVPSVPILPVPDGLAPSTSSQQRFTGSMPRPPAPPTFAAPRSLVVPNVRPVKAGESSGASSSSSIYYPSQDPTRL GAKGDVIE Q22412 Spliceosome-associated protein CWC15 homolog Caenorhabditis elegans 0.026154846 1 LEVO MTTAHRPTFHPARGGTARGEGDLSKLSNQYSSKDMPSHTKMKYRQTGQETEADLRKKDLRRELEDKERNAIREKRARDSA SSSSSHSKRQRMDQIAAESAASVDADEAVDELNSSDDDDSDEDDTAALMAELEKIKKERAEEKAARDEEIKEKEEKQRME NILAGNPLLNDTPAGSSTSGGDFTVKRRWDDDVVFKNCAKGVEERKKEVTFINDAIRSEFHKKFMDKYIK O45766 GCF C-terminal domain-containing protein Caenorhabditis elegans 0.094244891 1 LEVO MFRKPKAKGAIRQRKSDGWDEPDAENQQVVSAIEVKQPAVPRPAMSFDADEGADSTFKLKKDKKKVEELKRQHKLEEEAE KLYKEEKIRKEALDKIVKKEKLSKEDKKTKNERHKYLDKYRDKSAKHISNSESYEYEENLDIDAEAISSVSNKFNSAFEG IPDSRAVFEAKKRRERARREGNQDGYIPLDDTQKLKSKSERNRLIREDENDDSDEECTNKFYSARELLRTEEDRRREEQE GFLERENGDIDEAERIKGDDDSENEEWEKQQIRKAVSRREIGQLRTEKRNTSKLFGHTVPVEDDTAMDMDIDLDMDVQVI GKPEFTGPSNTGGVVKIEDILAKLKLRIQERDEALNFRKEEKRKLEQNIEENKSMIAKIEMELPNQSTKYTMYQELRVYS RSLLECLNEKVGEINSIIDKKRDCGKSRTSRLSVRRRQDMRDQHAECMQGRNARMGEAAGRAAERDARRGRRRREREFTL ARINHEEGLSTDDEEPTPQSMNDQKICDEVEAVASVLFADALDEYSDLRKVFGRMTDWLAVDPKSFQDAYVYLCIPKLSS PYVRLQILRADFLRKETILTSMQWFHIAMLAGSENAEIDQSHEILVELAPAIVEKVVIPFLIDTVKEEWDPMSLRQTRHL TTFCSLFEKLPNLTEKSKQFNAFLNAIRERICDCISEDLFMPIFMPNALEQPICRQFHDRQFWTCIKLIKSINALSPLIS IAARFELVVEKCVNSQCVMALRTGSKNDVTAERKVRGLLAELDDSLLKMGGRTSFRQLIGTLELIAEEQSKAGRSFHKEI RKFLEKLER G5ECH1 Intron-binding protein aquarius Caenorhabditis elegans 0.170397688 1 LEVO MVTKRHQEAVVTRGAIENDTISAVAAKFWAPFTAETHENFDAKLIDTIYDNEMLKTSFNSRKIMMLEFSQYLEAYLWPNY VPEKASKAWNMSIVVMINEKFRERNLDSWNCFTKKSEHFPHFFKSILQLSLQEEGLASSEHCALLTFLVNAFGSVETPIV HKETRKLVSIEIWAGLLDSQREDLFKKQKKLKKIWENVRQKMTAAAADNNEFERTYLWNLIEKFKRVLNSLEPNEAQESE EGEVRDPIDSIKYCERFIELLIDLESILQTRRFFNSVLHSSHILTHCLLSSLISTDAGSLFFQLVQLLKFYARFEIDDLS GRQLTHKEVSEQHYQSVTRLQKAAFRLFNETMKEFYVLNVSGVDTRRALQKQFGDMNHAEVYRFAEYLHLVPAFGEDPNH QTSLLHLYPHQHLVETITLHCERRPNQLTQLNEKPLFPTEKVIWDENIIPYENYTGDGVLALDKLNLQFLTLHDYLLRNF NLFQLESTYEIRQDLEDVLFRMKPFQHESRNETVFSGWARMALQIDHFQISEVAKPLVGEKSPAVVRGVVTVNIGRRQDI RQEWENLRKHDVCFLVACRSRKSASGLKFDVRRPFSEQIEVLSVRGCDVEGMLDQDGHLLEEFTAWEKKAKIPGDLRKFR LLLDPNQYRIDMEQGTKDDIYDTFNLIVRRDSKTNNFKAVLQTIRDLLNTECVVPDWLTDVILGYGEPDSAHYSKLSSAV PELDFNDTFLSFAHVKESFPGYKIELADGFDEKEAVPPFKLEFKELERRQDVEIKPGELRTILVTPLTRKKVTPYSYDPR KNQVKFTPSQVEAIKSGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNWPNQRTLIVTHSNQALNQLFEKIIALDVDERHL LRMGHGEEALETEKDFSRYGRVNYVLKERLQLLNCVEKLAKALKIVGDVAYTCENAGYFFRFSVCRVWEEFLAKVTSKGC NKLAEGIISEIFPFTGFFKDIPDLFSGNNSADLKVAHSCWRHIEQIFEKLDEFRAFELLRNGRDRTEYLLVKEAKIIAMT CTHAALRRNELVKLGFRYDNIVMEEAAQILEVETFIPLLLQNPQDGHNRLKRWIMIGDHHQLPPVVQNQAFQKYSNMEQS LFARLVRLSVPNVQLDRQGRARAQIAELYQWRYNGLGNLPHVDGLPQFQNANAGFAFPFQFIDIPDFNGHGETQPSPHFY QNLGEAEYACALYTYMRILGYPAEKISILTTYNGQAQLIRDVFQRRCDTNPLIGMPAKVSTVDKYQGQQNDFIILSLVKT RNIGHIRDVRRLVVALSRARLGLYVLGRSKVFMDCLELTPAMRIFAKYPRKLVILPFEAHPTIRKWNERSKDGEPMEIQD TLHMTHFVHEFYMSNLPAMRDAYEQAMNEYMESQRLLNPPIDETQMDVETEHEKKHREAMERKKKQEMDDKKEADIHFED MDHEMQEPAATAAPAPGAPAVEEPPPK Q9U1Q7 Uncharacterized protein T27F2.1 Caenorhabditis elegans 0.060303516 1 LEVO MSMKLRDILPAPVAADEAASQIRRDPWFGGRDNEPSAALVSKEPPPYGKRTSFRPRGPEDFGDGGAFPEIHVAQFPLGLG LGDMRGKPENTLALQYGTDGKLQHDAIARIGHVKDKVVYSKLNDMKAKTWNEDDDDIQKPDDDAVIDATEKTRMALEKIV NSKVASALPVRHADKLAPAQYIRYTPSQQNGAAGSQQRIIRMVEEQKDPMEPPKFKINQKIPRAPPSPPAPVMHSPPRKM TAKDQNDWKIPPCISNWKNPKGFTVGLDKRLAADGRGLQQTHINENFAKLADALYIADRKAREEVETRAQLERRVAQNKK SEQEAKMAEAAAKARQERSAMRRKDDEDDEQVKVREEIRRDRLDDIRKERNIARSRPDKADKLRKERERDISEKIVLGLP DTNQKRTGEPQFDQRLFDKTQGLDSGAMDDDTYNPYDAAWRGGDSVQQHVYRPSKNLDNDVYGGDLDKIIEQKNRFVADK GFSGAEGSSRGSGPVQFEKDQDVFGLSSLFEHTKEKKRGGDGGDSRGESKRSRRD Q22836 Peptidyl-prolyl cis-trans isomerase Caenorhabditis elegans 0.018547002 1 LEVO MPAPINDQAPYVILDTTMGKIALELYWNHAPRTCQNFSQLAKRNYYNGTIFHRIIADFMIQGGDPTGTGRGGASIYGDKF SDEIDERLKHTGAGILSMANAGPNTNGSQFFITLAPTQHLDGKHTIFGRVAAGMKVIANMGRVDTDNHDRPKIEIRILKA YPSESSVLS Q18445 5.2.1.8 WD_REPEATS_REGION domain-containing protein Caenorhabditis elegans 0.05476621499999999 1 LEVO MSASVSDPYEQMPAAPTDDDLEDKPEADKKALLNQVFKSLKRAQDLFYHDYAQPPPMPEENDSLIRSMKRKHEYGNVIKK VEEMKVRRENEMLALPTSQPMHGTGSVIASAGTPLAITDGSGKLVNQQQGSAKSGTLLPLVPLGNSSKGEDNTTRSLLPS KAPMMMKPKWHAPWKLYRVASGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPF LFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQS VDPQVITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPDNIKQWKLPKGEFMQNLSGHNAIINTLS SNDDGVVVSGADNGSLCFWDWRSGFCFQKIQTKPQPGSIESEAGIYASCFDKTGLRLITAEADKTIKMYKEDDEATEESH PIVWRPEIVKKKAY G5EEL2 Septin and tuftelin-interacting protein 1 homolog Caenorhabditis elegans 0.094421539 1 LEVO MEDDDGRESFEINDMDLEYAMNPGGRRRFQNKDQATYGVFAPDSDDDDDEQGTSRGPYKKRSKISAPMSFVSGGIQQGNK IDKDDPASLNLNLGGEKKPKEDDEGSIQIDFDKRTKKAPKQNGAQVFAGMRSSANHGAADINQFGSWMRGDGNSNKIMKM MQAMGYKPGEGLGAQGQGIVEPVQAQLRKGRGAVGAYGKESTATGPKFGESAADAQKRMAQEGTSSRPTNDDQEKSGLKI KGSWKKSQTVKTKYRTIEDVMEEGMSASRPASHQQSQQYSNIKVIDMTGKQQKIYSGYDSFSMKTRSEYDTVDDEERTVF DVPELIHNLNLLVDLTEEGIRRSNQQLISLKDQTTALEYDLQQVQKSLGTEEQEAQHIKDVYELIDGFSSNRSPSMEECQ ELFRRLRSEFPHEYELYSLETVAIPTVLPLIQKYFVAWKPLEDKNYGCELISTWRDILDDSKNGRKMTFGHNKTKGDEIR AYDRIIWEGILPSIRRACLQWDPSTQMHEMIELVEQWIPLLSAWITENILEQLVVPKIAERVNQWDPMTDEIPIHEWLVP WLVLLGDRIQTVMPPIRQKLSKALKLWDPMDRSALETLRPWQNVWSAATFSAFIAQNIVPKLGVALDTMELNPTMNPEYP EWTACMEWLEFTHPDAIANIVTKYFFPRFYNCLCLWLDSPGVDYNEVKRWYGSWKARIPQVLVNYPTVNENLRRSMIAIG RSLQGEKVGGLQATPIAPMAPPPPMAPHFTQAAPVQKLSLKEIIEYTAGKNGFTYHPQKDRYKDGRQVFWFGALSIYLDS EMVYVMDPIEFVWRPSGLNELIQMAQGAQG Q17784 WD_REPEATS_REGION domain-containing protein Caenorhabditis elegans 0.065385664 1 LEVO MDALQAYGGSDSEHSDDDASMDQVAKGKSSTLLERAIVTAPDVESKSAIRQVAIVDPKTKEIKSNPKFDQLFKPESGPVN HFKSEQQRSQKNTLTGFVEPAHLNEFHFNRQIRSFDTLGYAQNPTAESGTTHFVGDVKKAEAEKGVSLFESKKTGGEKRK RVRNDDSADIDGYTGPWSRFIDEKTVAKPTPELQKQMDEIVKKRQEKSRRFKKEKEDSEQMAEESSTLHLKEAEDYQGRS FLVPPSFTGVNLREDYVPERCFVPKKLVHTYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKL PVREVAFNNEGTEFLSASFDRYVKLWDTETGQVKQRFHTGHVPYCLKYHPDDDKNHMFLVGMQNKKIIQWDSRSGEIVQE YDRHLQAVNSITFFDKNRRFASTSDDKSVRIWEWEIPVDTKLIQNVGLHAIPTMTKSPNDKWVVGQCMDNRIVLFQLVDD KLRFSKKKAFRGHNAAGYACNIDFSPDQSFLISGDADGKLFIWDWRTHKIVGKWKAHDSTCIAALWHPHEKSRMITAGWD GLIKMWN O44729 Replication stress response regulator SDE2 Caenorhabditis elegans 0.057466108999999994 1 LEVO MSATKHNERVGRRNDRKRDASQACLPERSPSLRSEPRQQRSHPYLQTRTNTHRQRPMIRPSSVVSMSGRSIAPSDSSEND DRHFDVDEEMESMSLDSPLPIEVPARPFPDKPYYWMNDYKTLEFIRTNFPSDSFYVMHNGKIIENFNAFIDENMGQSLVK YSFHLRVRGGKGGFGSLLRSFRVNKSTNKLMMRDLNGRRMASVDEEAKLKRYLEKQARKEQELKEKRKAKLEKLTAGPAK HMFEDQDYLSRREEIINKTEDACEAGFALMLEMKRNSRKSKEQENKNDEDEDDDVNAEDVTDLFNDRGGRKRKIAAPSIG EDGGNKRINDESDDSEDDSENEVDPEELEAIRQYFEAKKQDEKDNGEGTSEAVPEVLVDEQEIEPAKRPRLDSASNIDDL PKIDVKTPCEYGPISLDDFTSAEDLELLGLEHLKSALNDRGLKCGGSLVERAARLWCVKGKQPREYPKNILTPELKKKIA EEEEAERKAAKKAKKSKKNQ G5EC45 Coiled-coil domain-containing protein 12 Caenorhabditis elegans 0.008135504 1 LEVO MDLDIVQREITEHLKDVLHEKAIDSVDLAMLAPKKIDWDLKRDIESKLQKLERRTQKAVATIIRQRLAE Q95XJ1 Small nuclear ribonucleoprotein Sm D3 Caenorhabditis elegans 0.014836212 2 LEVO MTSVGVPIKILHEAEGHMVTLETVTGEVYRGKLSEAEDNMNCQLAETVVTFRDGRSHQLDNVFIRGNKIRFMILPDMLKN APMFKNIGRAQKGAIGMGLGGLDQRGRGRGTAFRRPMGRGGPRGMSRPGGAPTFRG Q17348 Probable small nuclear ribonucleoprotein-associated protein B Caenorhabditis elegans 0.016768627 2 LEVO MTISKNNKMMAHLNYRMKIILQDGRTFIGFFKAFDKHMNILLAECEEHRQIKPKAGKKTDGEEKRILGLVLVRGEHIVSM TVDGPPPRDDDSVRLAKAGGAGGVGQAKPGGRGMPAMPGMPGMPPGGAPGGLSGAMRGHGGPGMAAMQPGYGGPPGGRPF P91918 Small nuclear ribonucleoprotein Sm D1 Caenorhabditis elegans 0.01372407 2 LEVO MKLVRFLMKLSHETVNIELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKEPVKLDTLSIRGNNIRYIILPDPLALDTLL IDDEPRKKARAARAGASRGRGGRGGMRGGRGGRGRGRGGPRGAGPRR E3LR34 Probable small nuclear ribonucleoprotein Sm D2 Caenorhabditis elegans 0.013291529

MSAQAKPRSEMTAEELAAKEDEEFNVGPLSILTNSVKNNHQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISKMFLRGDSVILVVKNPLAQAE

2 LEVO MSAQAKPRSEMTAEELAAKEDEEFNVGPLSILTNSVKNNHQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKT GKGKKKAKSVAKDRFISKMFLRGDSVILVVKNPLAQAE Q18786 Probable small nuclear ribonucleoprotein E Caenorhabditis elegans 0.010625317999999998 2 LEVO MSTRKLNKVMVQPVNLIFRYLQNRTRVQIWLYEDVTHRLEGYIIGFDEFMNVVFDEAEEVNMKTKGRNKIGRILLKGDNI TLIHAAQQEA Q9XTU6 Probable small nuclear ribonucleoprotein F Caenorhabditis elegans 0.009256533999999999 2 LEVO MSAVQPVNPKPFLNSLTGKFVVCKLKWGMEYKGVLVAVDSYMNLQLAHAEEYIDGNSQGNLGEILIRCNNVLYVGGVDGE NETSA P34659 Probable small nuclear ribonucleoprotein G Caenorhabditis elegans 0.008756209000000001 2 LEVO MSKTHPPELKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKDGGSVNLGMTVIRGNSVVIMEPKERIS Q9N4G9 Probable U2 small nuclear ribonucleoprotein A' Caenorhabditis elegans 0.0289059 1 LEVO MVRLTTELFAERPQFVNSVNMREINLRGQKIPVIENMGVTRDQFDVIDLTDNDIRKLDNFPTFSRLNTLYLHNNRINYIA PDIATKLPNLKTLALTNNNICELGDIEPLAECKKLEYVTFIGNPITHKDNYRMYMIYKLPTVRVIDFNRVRLTEREAAKK MFKGKSGKKARDAIQKSVHTEDPSEIEPNENSSGGGARLTDEDREKIKEAIKNAKSLSEVNYLQSILASGKVPEKGWNRQ MDQNGADGEAMES Q9BLB6 RRM domain-containing protein Caenorhabditis elegans 0.024881344 1 LEVO MADINPNHTIYVNNLNEKVKKDELKRSLHMVFTQFGEIIQLMSFRKEKMRGQAHIVFKEVSSASNALRALQGFPFYGKPM RIQYAREDSDVISRAKGTFVEKRQKSTKIAKKPYEKPAKNGKSAAEPTQKEPQETDGPGLPNNILFCSNIPEGTEPEQIQ TIFSQFPGLREVRWMPNTKDFAFIEYESEDLSEPARQALDNFRITPTQQITVKFASK Q21323 Pre-mRNA-processing factor 19 Caenorhabditis elegans 0.053272633 4 LEVO MSFVCGISGELTEDPVVSQVSGHIFDRRLIVKFIAENGTDPISHGELSEDQLVSLKSGGTGSAPRNVSGTSIPSLLKMLQ DEWDTVMLNSFSLRQQLQIARQELSHSLYQHDAACRVISRLSKELTAAREALSTLKPHTSAKVDDDVSIDESEDQQGLSE AILAKLEEKSKSLTAERKQRGKNLPEGLAKTEELAELKQTASHTGIHSTGTPGITALDIKGNLSLTGGIDKTVVLYDYEK EQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDISLNASGDYILSASDDSYWAFS DIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSE DGEVKLWDLRKLKNLKTFANEEKQPINSLSFDMTGTFLGIGGQKVQVLHVKSWSEVVSLSDHSGPVTGVRFGENARSLVT CSLDKSLRVFSF Q10051 2.3.2.27 Peptidyl-prolyl cis-trans isomerase E Caenorhabditis elegans 0.008825046 1 LEVO KRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFAR Q9U2S6 5.2.1.8 MAGNESIUM ION 2.4305e-05 7 MG INOSITOL HEXAKISPHOSPHATE 0.0006600349999999999 2 IHP GUANOSINE-5'-TRIPHOSPHATE 0.0005231799999999999 1 GTP ZINC ION 6.5409e-05 7 ZN singleParticle particle 7.9 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 0.75 2.0 GATAN K3 (6k x 4k) 60.0 1 6ID1 3.0 FSC 0.143 CUT-OFF 247908 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD