2025-07-09 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY STRUCTURE_SUMMARY atom_site em_admin entity entity_name_com entity_poly entity_poly_seq entity_src_gen pdbx_branch_scheme pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_modification_feature pdbx_nonpoly_scheme pdbx_poly_seq_scheme pdbx_struct_assembly pdbx_struct_assembly_gen pdbx_struct_assembly_prop pdbx_struct_sheet_hbond pdbx_unobs_or_zero_occ_atoms pdbx_unobs_or_zero_occ_residues pdbx_validate_torsion struct_asym struct_conf struct_conn struct_mon_prot_cis struct_ref struct_ref_seq struct_ref_seq_dif struct_sheet_range _atom_site.auth_asym_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _em_admin.last_update _entity_src_gen.entity_id _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_src_id _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.pdb_asym_id _pdbx_entity_branch.entity_id _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_list.entity_id _pdbx_entity_nonpoly.entity_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_validate_torsion.auth_asym_id _struct_conf.beg_auth_asym_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.end_auth_asym_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id DATA_COLLECTION em_admin _em_admin.last_update DATA_COLLECTION em_admin em_software _em_admin.last_update _em_software.name EXPERIMENTAL_SUMMARY em_admin em_software _em_admin.last_update _em_software.name PDBe PDBe 2024-01-04 2024-10-23 2024-10-23 2025-07-09 Laboratories of Excellence (LabEx) ANR-LBX-62 IBEID France Cryo-EM structure of a Foamy Virus fusion glycoprotein in the postfusion conformation Fernandez I Backovic M Envelope, Fusion, Spumavirus, VIRUS Fernandez I Bontems F Brun D Coquin Y Goverde CA Correia BE Gessain A Buseyne F Rey FA Backovic M Structures of the Foamy virus fusion protein reveal an unexpected link with the F protein of paramyxo- and pneumoviruses. Sci Adv US 10 eado7035 eado7035 2024 39392890 doi:10.1126/sciadv.ado7035 2375-2548 8rm1 FULLOVERLAP Gorilla Foamy Virus Envelope glycoprotein Gorilla Foamy Virus Envelope glycoprotein 0 1 Spumavirus Envelope glycoprotein gp130 Simian foamy virus 0.052050995999999995 3 Drosophila melanogaster LEVO ALRAQHPVPKYVEVNMTSIPQGVFYQPHPEPIIHTERVLGLSQVLMINSENVANSANLSQETKALLTEMVNEEMQGLSDV MIDFEIPLGDPRDQEQYIHRKCYQEFAHCYLVKYKTPQPWPNEGLIADQCPLPGLADVSFYPYQAIWDYYAKIENIRPAN WTSSKLYGKARMGSYYIPKRLRNINNTHILFCSDVLYSKWYNLQNSILQNENELTKRLSNLTIGNKLKNRALPYEWAKGG LNRLFRNISVLDVCSRPEMVLLLNKTYYTFSLWEGDCNITRYNVNETVPECKDFPHRRFNDHPYSCRLWRYREGKEEVKC LTSDHTRCLYYPEYSNPEALFDFGFLSYMRNFPGPQCIESTSIRQQDYEVYSIYQECKLASKTYGIDSVLFSLKNFLNYT GKPVNEMPNARAFVGLIDPKFPPTYPNITRDQYQGCNINQRRKR K7YEW5 Envelope glycoprotein gp130 Simian foamy virus 0.042067800999999995 3 Drosophila melanogaster LEVO EVNNNYSKLRSMGYALTGAVQTLAQISDINDQNLQQGIYLLRDHIVTLMEATLHDISIMEGMFAVQHVHTHLNHLRTMLM ERRIDWTYMSSSWLQTQLQKSDDEMKVIKRTARSLVYYVKQTYNSLTATAWEIGLYYELIIPRHIYLNNWQIVNIGHLIK SAGQLTHVTLSHPYEIINRECSNTLYLHLEECRRLDYVICDVVKIVQPCGNSSDSSDCPVWAEPVKEPHVQISPLKNGSY LVLASSTDCQIPPYVPSVVTVNETTQCFGVTFKKPLVAEEKTSLEPQLPHLQLRLPHLVGIIAKIKGIKIEVTSSGESIK DQLERAKAELLRLDIHEDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK K7YEW5 2-acetamido-2-deoxy-beta-D-glucopyranose 0.000221208 3 NAG singleParticle particle 8.0 Quantifoil R1.2/1.3 CARBON HOLEY ETHANE 100 281 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 1.0 3.0 GATAN K3 BIOQUANTUM (6k x 4k) 50.0 1 CTFFIND PHASE FLIPPING AND AMPLITUDE CORRECTION
ab-initio generated model
 2 3.1 FSC 0.143 CUT-OFF 98407 NOT APPLICABLE NOT APPLICABLE 4 RELION emd_19348.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 302.72 302.72 302.72 90.0 90.0 90.0 X Y Z -0.057551213 0.101282805 0.000046144127 0.0025398359 0.86 0.86 0.86 0.00603 AUTHOR Other other
Phenix map to model tool followed by manual building
 8AEZ PDB experimental model emd_19348_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 302.72 302.72 302.72 90.0 90.0 90.0 X Y Z -0.0256531 0.04785589 0.000046095356 0.0019339806 0.86 0.86 0.86 AUTHOR emd_19348_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 302.72 302.72 302.72 90.0 90.0 90.0 X Y Z -0.02465085 0.04860455 0.0000461929 0.0019363996 0.86 0.86 0.86 AUTHOR