2024-03-27 REL PDBe PDBe PDBe 2023-12-20 2024-02-07 2024-02-07 2024-03-27 Aligning Science Across Parkinsons (ASAP) ASAP-000282 United States In situ cryo-electron tomogram of an autophagosome in the projection of an iPSC-derived neuron #2 Hoyer MJ Capitanio C Smith IR Paoli JC Bieber A Jiang Y Paulo JA Gonzalez-Lozano MA Baumeister W Wilfling F Schulman BA Harper WJ Autophagy, ERphagy, Degradation, Neuron, Cargo, Microtubules, ER, Autophagosome, CYTOSOLIC PROTEIN Hoyer MJ Capitanio C Smith IR Paoli JC Bieber A Jiang Y Paulo JA Gonzalez-Lozano MA Baumeister W Wilfling F Schulman BA Harper JW Combinatorial selective ER-phagy remodels the ER during neurogenesis. Nat.Cell Biol. UK 26 378 392 2024 38429475 doi:10.1038/s41556-024-01356-4 1465-7392 autophagosome containing membrane cargo captured in situ in the peripheral projections of iPSC-derived neurons grown a EM grid autophagosome containing membrane cargo captured in situ in the peripheral projections of iPSC-derived neurons grown a EM grid 0 Homo sapiens iPSC KOLF2.0_AAVS-TREG3-NGN2 induced-Neurons, DIV 18 neuronal projections tomography cell 7.0 Quantifoil R2/1 GOLD 200 HOLEY PLASMA CLEANING
Grid coated with Matrigel
 ETHANE-PROPANE 70 FEI VITROBOT MARK IV
iPSC-derived iNeurons on the grid were transduced at Day 12 with Lentiviruses carrying mCherry-LC3B and TEX264-GFP and plunged at DIV 18.
none NO SECTIONING TFS KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.5 3.5 42000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN TFS Selectris X FEI FALCON IV (4k x 4k) 4096 4096 2.0 1 IMOD 50 emd_19194.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 1024 1024 712 0 0 0 1024 1024 712 12001.28 12001.28 8344.641 90.0 90.0 90.0 X Y Z -20.884499999999999 13.985004999999999 0.15032952 0.8427676 11.72 11.72 11.720001 AUTHOR Tomogram of an autophagosome containing ER captured in the projection of an iPSC-derived neuron. Tomogram denoised with cryo-CARE with a model trained on this same tomogram.