2024-10-30 REL PDBe PDBe PDBe 2023-11-05 2024-10-02 2024-10-02 2024-10-30 European Research Council (ERC) M822.00045 European Union Tomogram of T. pseudonana pyrenoid used for subtomogram avergaing Demulder M Righetto RD Wietrzynski W Lamm L Engel BD marine diatoms, chloroplast, pyrenoid, photosynthesis, carbon fixation, rubisco Shimakawa G Demulder M Flori S Kawamoto A Tsuji Y Nawaly H Tanaka A Tohda R Ota T Matsui H Morishima N Okubo R Wietrzynski W Lamm L Righetto RD Uwizeye C Gallet B Jouneau PH Gerle C Kurisu G Finazzi G Engel BD Matsuda Y Diatom pyrenoids are encased in a protein shell that enables efficient CO 2 fixation. Cell 187 5919 5934.e19 2024 39357521 doi:10.1016/j.cell.2024.09.013 1097-4172 T. pseudonana T. pseudonana 0
Pyrenoid in T. pseudonana chloroplast
Thalassiosira pseudonana tomography cell 7.0 ETHANE OTHER OTHER 3 0.03 600 83 1000 150
The value given for _em_focused_ion_beam.instrument is FEI Aquilos II. This is not in a list of allowed values {'OTHER', 'DB235'} so OTHER is written into the XML file.
 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 3.0 3.0 GATAN K3 BIOQUANTUM (6k x 4k) 2.0 1 38 emd_18841.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 1024 1440 512 208 -208 -256 1024 1440 512 8777.728 12343.68 4388.864 90.0 90.0 90.0 X Y Z -0.548639 0.58090997 0.0073405183 0.08382601 8.572 8.572 8.572 AUTHOR emd_18841_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 1024 1440 512 208 -208 -256 1024 1440 512 8777.728 12343.68 4388.864 90.0 90.0 90.0 X Y Z -0.13711412 0.17133245 0.0040787207 0.015424708 8.572 8.572 8.572 AUTHOR