2023-11-29 REL PDBe PDBe PDBe 2023-10-10 2023-11-29 2023-11-29 2023-11-29 German Research Foundation (DFG) Germany Sub-tomogram average of P116 from Mycoplasma pneumoniae tethered to the mycoplasma membrane (front views only). Manger S Lipid Shuttle Mycoplasma pneumoniae, LIPID BINDING PROTEIN Manger S P116 from Mycoplasma is a self-sufficient lipid uptake and delivery machinery To Be Published 0353 Sprankel L Vizarraga D Martin J Manger S Meier-Credo J Marcos M Julve J Rotllan N Scheffer MP Escola-Gil JC Langer JD Pinol J Fita I Frangakis AS Essential protein P116 extracts cholesterol and other indispensable lipids for Mycoplasmas. Nat Struct Mol Biol US 30 321 329 2023 36782049 doi:10.1093/nar/gky1106 1545-9985 Sub-tomogram average of P116 from Mycoplasma pneumoniae tethered to the mycoplasma membrane (front views only). Sub-tomogram average of P116 from Mycoplasma pneumoniae tethered to the mycoplasma membrane (front views only). 0 Mycoplasmoides pneumoniae M129 tomography particle 7.4
PBS
 C-flat-1.2/1.3 COPPER GLOW DISCHARGE ETHANE 100 4 FEI VITROBOT MARK IV
A 3.5 uL drop was applied to a (45 s) glow-discharged R1.2/1.3 C-flat grid (Electron Microscopy Science) with a 4 nm carbon-coat, and plunge-frozen in liquid ethane at 100 percent relative humidity, 4degC, and a nominal blot force of -1, with a wait and blotting time of 8-12 s..
Tomography on intact M. pneumoniae cells.
NO SECTIONING FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 3.0 3.0 81000.0
Tilt-series were recorded using SerialEM v4.0.1423 at a nominal magnification of 81,000 (1.112 A per pixel) in nanoprobe EFTEM mode at 300 kV with a Titan Krios G2 (Thermo Fischer Scientific) electron microscope equipped with a BioQuantum-K3 imaging filter (Gatan), operated in zero-loss peak mode with 20 eV energy slit width, and a K3 Summit detector (Gatan). The total dose per tomogram was 120 e-/A2, and the tilt series covered an angular range from -60deg to 60deg with an angular increment of 3deg and a defocus set at -3 um.
GATAN K3 BIOQUANTUM (6k x 4k) 3.0
The total dose per tomogram was 120 e-/A2, and the tilt series covered an angular range from -60deg to 60deg with an angular increment of 3deg
 1 RELION 3,1
Resolution approx. 30A. Only front views were used (and only the front view of the sub-tomogram average was analyzed.
41 emd_18629.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 128 128 128 0 0 0 128 128 128 568.32 568.32 568.32 90.0 90.0 90.0 X Y Z -4.4226503 8.781199000000001 -0.000000000013737 0.99999976 4.44 4.44 4.44 AUTHOR Sub-tomogram average of P116 from Mycoplasma pneumoniae tethered to the mycoplasma membrane (front views only).