REL PDBe PDBe PDBe 2010-12-13 2011-02-17 2011-05-06 2013-01-23 EMD-1565 Cognate 70S-TC complex Agirrezabala X Schreiner E Trabuco LG Lei J Ortiz-Meoz RF Schulten K Green R Frank J ribosome, ternary complex, cognate true Agirrezabala X Schreiner E Trabuco LG Lei J Ortiz-Meoz RF Schulten K Green R Frank J Structural insights into cognate versus near-cognate discrimination during decoding. EMBO J. 30 1497 1507 2011 21378755 doi:10.1038/emboj.2011.58 4v6k FULLOVERLAP Cognate 70S-TC complex Cognate 70S-TC complex
70S.fMet-tRNAfMet.EF-Tu.Trp-tRNATrp on cognate codon
Monomeric 4 2.8 Sedimentation 70S Ribosome false Escherichia coli ribosome-prokaryote: ALL fMet-tRNAfMet Escherichia coli CGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGATCGTCGGTTCAAATCCGGCCCCCGCAACCA TRANSFER SINGLE STRANDED false EF-Tu Escherichia coli 1 Monomer true Escherichia coli Trp-tRNATrp Escherichia coli AGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCA TRANSFER SINGLE STRANDED false singleParticle particle 0.04 7.5
HiFi (50 mM Tris-HCl pH 7.5, 70mM NH4Cl, 30 mM KCl, 3.5 mM MgCl2, 0.5 mM spermidine, 8mM putrescine, 2 mM DTT)
 NITROGEN 90 80 OTHER
Vitrification instrument: Vitrobot
Blot for 6 seconds FEI TECNAI F30 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 1.2 4.0 59000.0 58269.0 GATAN LIQUID NITROGEN Objective corrected at 100,000 times magnification TVIPS TEMCAM-F415 (4k x 4k) 20
Automated data collection system AutoEMation (CCD mag. 100000x) TVIPS TemCam-F415
 Eucentric
Defocus groups, Wiener filter
 C1 OTHER 8.25 OTHER Spider 359223 emd_1849.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 250 250 250 -125 -125 -125 250 250 250 375 375 375 90 90 90 X Y Z -102.403999999999996 299.406000000000006 5.38026 28.487200000000001 1.5 1.5 1.5 32.399999999999999 AUTHOR Surface rendered view of Cognate 70S-TC complex
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 2I2V FLEXIBLE FIT MDFF
Protocol: MD-based flexible fitting
RMSD, cross correlation REAL 1OB2 FLEXIBLE FIT MDFF
Protocol: MD-based flexible fitting
RMSD, cross correlation REAL