2024-10-30 REL PDBe PDBe PDBe 2023-09-18 2024-04-17 2024-04-17 2024-10-30 Wellcome Trust 209250/Z/17/Z United Kingdom Wellcome Trust 090532/Z/09/Z United Kingdom German Research Foundation (DFG) 390874280 Germany Wellcome Trust 107806/Z/15/Z United Kingdom Wellcome Trust 099683/Z/12/Z United Kingdom Subtomogram average of pseudorabies virus nuclear egress complex (UL31/34) determined in situ Prazak V Grange M Vasishtan D in situ, nuclear egress, VIRAL PROTEIN Prazak V Mironova Y Vasishtan D Hagen C Laugks U Jensen Y Sanders S Heumann JM Bosse JB Klupp BG Mettenleiter TC Grange M Grunewald K Molecular plasticity of herpesvirus nuclear egress analysed in situ. Nat Microbiol UK 9 1842 1855 2024 38918469 doi:10.1038/s41564-024-01716-8 2058-5276 Nuclear Egress Complex of Pseudorabies Virus (Kaplan strain) in situ Nuclear Egress Complex of Pseudorabies Virus (Kaplan strain) in situ 0 Suid herpesvirus 1 strain Kaplan subtomogramAveraging cell 7.5 ETHANE-PROPANE FEI POLARA 300 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 3.0 6.0 NITROGEN GIF 2002 GATAN K2 SUMMIT (4k x 4k) COUNTING 3.4 1 C2 BACK PROJECTION 14.0 FSC 0.143 CUT-OFF PEET
FSC was calculated by taking the final particles, splitting them into two groups and randomising their orientations by a maximum of 15 degrees. These two groups were then separately refined.
135576 16 423109 PEET OTHER PEET emd_18474.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 60 60 60 0 0 0 60 60 60 213.0 213.0 213.0 90.0 90.0 90.0 X Y Z -213.856699999999989 119.119484 -6.123051 47.866207000000003 3.55 3.55 3.55 52.689999999999998 AUTHOR Pseudorabies virus nuclear egress complex determined in situ 4Z3U C PDB experimental model 4Z3U D PDB experimental model RIGID BODY FIT Cross correlation REAL emd_18474_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 160 160 160 0 0 0 160 160 160 568.0 568.0 568.0 90.0 90.0 90.0 X Y Z -229.479600000000005 143.933410000000009 -2.2821014 24.617352 3.55 3.55 3.55 AUTHOR emd_18474_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 60 60 60 0 0 0 60 60 60 213.0 213.0 213.0 90.0 90.0 90.0 X Y Z -232.127260000000007 140.378109999999992 -0.866619 37.214607000000001 3.55 3.55 3.55 AUTHOR masked, sharpened volume emd_18474_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 60 60 60 0 0 0 60 60 60 213.0 213.0 213.0 90.0 90.0 90.0 X Y Z -219.852800000000002 131.485289999999992 -6.333003 46.988185999999999 3.55 3.55 3.55 AUTHOR half1 emd_18474_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 60 60 60 0 0 0 60 60 60 213.0 213.0 213.0 90.0 90.0 90.0 X Y Z -217.106220000000008 130.294780000000003 -6.2913227 46.926623999999997 3.55 3.55 3.55 AUTHOR half2