REL PDBe PDBe PDBe 2010-11-29 2011-06-30 2011-06-30 2011-06-30 Conformational changes of Adeno-associated Virus type 1 induced by genome packaging Gerlach B Kleinschmidt JA Bottcher B AAV-1 virus structure Gerlach B Kleinschmidt JA Bottcher B Conformational changes in adeno-associated virus type 1 induced by genome packaging. J.MOL.BIOL. 409 427 438 2011 21463638 doi:10.1016/j.jmb.2011.03.062 Adeno-associated Virus Type 1 Adeno-associated Virus Type 1
Recombinant AAV1 capsid, particles belong to group 2 (almost empty)
VP1, VP2 and VP3 in T1 arrangement 1 Adeno-associated virus - 1 Adeno-associated virus - 1 Homo sapiens VERTEBRATES 240 1 VIRUS-LIKE PARTICLE SEROTYPE false true AAV 1 singleParticle particle NEGATIVE
Vitrified
400 mesh perforated carbon
 ETHANE 100 96 HOMEMADE PLUNGER
Vitrification instrument: Controlled environment
Blot for 15 s before plunging FEI/PHILIPS CM200FEG FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 1.5 3.5 50000.0 GATAN LIQUID NITROGEN 95 At 200,000 times magnification on graininess of carbon KODAK SO-163 FILM ZEISS SCAI 7 105
Data binning 2x2 Px, before processing
8. Eucentric
Particles were sorted according to their density profiles. This reconstructions represents group 1, which consists of mainly empty particles.
Maps during combination
 I OTHER 9.8 FSC 0.5 CUT-OFF MRC 2555 emd_1837.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 123 123 123 0 0 0 123 123 123 344.4 344.4 344.4 90 90 90 X Y Z -12.167 23.531400000000001 -0.0152517 4.16022 2.8 2.8 2.8 4.6 AUTHOR Adeno-Associated Virus Type 1, reconstruction from group2 (almost empty particle)
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