2024-08-28 REL PDBe PDBe PDBe 2023-08-24 2024-07-24 2024-07-24 2024-08-28 H2020 Marie Curie Actions of the European Commission 101026765 European Union European Research Council (ERC) AdG TENDO European Union Swiss National Science Foundation CRSII5_189996 Switzerland Swiss National Science Foundation 310030_207754 Switzerland Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol, PI(4,5)P2 35:20:20:15:10) Kefauver JM Zou L Desfosses A Loewith RJ BAR domain, lipid reconstitution, membrane microdomain, LIPID BINDING PROTEIN Kefauver JM Hakala M Zou L Alba J Espadas J Tettamanti MG Gajic J Gabus C Campomanes P Estrozi LF Sen NE Vanni S Roux A Desfosses A Loewith R Cryo-EM architecture of a near-native stretch-sensitive membrane microdomain. Nature UK 632 664 671 2024 39048819 doi:10.1038/s41586-024-07720-6 1476-4687 0006 NATUAS Afonine PV Poon BK Read RJ Sobolev OV Terwilliger TC Urzhumtsev A Adams PD Real-space refinement in PHENIX for cryo-EM and crystallography. Acta Crystallogr D Struct Biol 74 531 544 2018 29872004 doi:10.1107/S2059798318006551 2059-7983 8qbd FULLOVERLAP Helical assembly of recombinant Pil1 protein tubulating +PIP2/+sterol lipid mixture (DOPC, DOPE, DOPS, cholesterol, PI(4,5)P2 35:20:20:15:10) Helical assembly of recombinant Pil1 protein tubulating +PIP2/+sterol lipid mixture (DOPC, DOPE, DOPS, cholesterol, PI(4,5)P2 35:20:20:15:10) 0 1 Saccharomyces cerevisiae TB50 Sphingolipid long chain base-responsive protein PIL1 Saccharomyces cerevisiae 0.038393042999999995 14 Escherichia coli 'BL21-Gold(DE3)pLysS AG' LEVO MHRTYSLRNSRAPTASQLQNPPPPPSTTKGRFFGKGGLAYSFRRSAAGAFGPELSRKLSQLVKIEKNVLRSMELTANERR DAAKQLSIWGLENDDDVSDITDKLGVLIYEVSELDDQFIDRYDQYRLTLKSIRDIEGSVQPSRDRKDKITDKIAYLKYKD PQSPKIEVLEQELVRAEAESLVAEAQLSNITRSKLRAAFNYQFDSIIEHSEKIALIAGYGKALLELLDDSPVTPGETRPA YDGYEASKQIIIDAESALNEWTLDSAQVKPTLSFKQDYEDFEPEEGEEEEEEDGQGRWSEDEQEDGQIEEPEQEEEGAVE EHEQVGHQQSESLPQQTTA P53252 D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE 0.000420096 14 I3P O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine 0.000792075 14 P5S helical helicalArray 7.4
20mM HEPES, pH 7.4, 150mM KoAc, 2mM MgAc
 EMS Lacey Carbon CARBON LACEY ETHANE 90 291 LEICA EM GP FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 0.6 1.8 FEI FALCON IV (4k x 4k) 50.0 1 5.408 133.595 D1 3.61 FSC 0.143 CUT-OFF 77414 NOT APPLICABLE emd_18310.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 531.2 531.2 531.2 90.0 90.0 90.0 X Y Z -0.18747392 0.35873693 0.0004193603 0.014356814 0.83000004 0.83000004 0.83000004 0.055 AUTHOR Sharpened helical map A&C, non-uniform refinement (D1, rise=5.408, twist=133.595) P53252 AlphaFold in silico model REAL emd_18310_msk_1.map emd_18310_additional_6.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 531.2 531.2 531.2 90.0 90.0 90.0 X Y Z -0.04671869 0.12773016 0.0004301599 0.009848971 0.83000004 0.83000004 0.83000004 AUTHOR Unsharpened helical map F&G&H (D4, rise=20.968, twist=-140.956) emd_18310_additional_5.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 531.2 531.2 531.2 90.0 90.0 90.0 X Y Z -0.0755722 0.18068825 0.00041936024 0.0106529845 0.83000004 0.83000004 0.83000004 AUTHOR Unsharpened helical map J (D1, rise=5.077, twist=-136.507) emd_18310_additional_4.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 531.2 531.2 531.2 90.0 90.0 90.0 X Y Z -0.07878619 0.18464583 0.00038144077 0.012517889 0.83000004 0.83000004 0.83000004 AUTHOR Unsharpened helical map D (D2, rise=11.142, twist=-137.653) emd_18310_additional_3.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 531.2 531.2 531.2 90.0 90.0 90.0 X Y Z -0.07312523 0.15279552 0.00048228475 0.011980216 0.83000004 0.83000004 0.83000004 AUTHOR Unsharpened helical map E (D1, rise=4.980, twist=-161.053) emd_18310_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 531.2 531.2 531.2 90.0 90.0 90.0 X Y Z -0.0442453 0.10819241 0.00039172242 0.009407401 0.83000004 0.83000004 0.83000004 AUTHOR Unsharpened helical map K (D1, rise=5.740, twist=152.300) emd_18310_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 531.2 531.2 531.2 90.0 90.0 90.0 X Y Z -0.055366218 0.14015394 0.0005551859 0.01082927 0.83000004 0.83000004 0.83000004 AUTHOR Unsharpened helical map B (D3, rise=14.548, twist=276.716) emd_18310_additional_7.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 531.2 531.2 531.2 90.0 90.0 90.0 X Y Z -0.0755722 0.18068825 0.00041936024 0.0106529845 0.83000004 0.83000004 0.83000004 AUTHOR Unsharpened helical map A&C, non-uniform refinement (D1, rise=5.408, twist=133.595) emd_18310_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 531.2 531.2 531.2 90.0 90.0 90.0 X Y Z -0.41684216 0.42811167 0.00007278711 0.053530417 0.83000004 0.83000004 0.83000004 AUTHOR Helical map A&C, non-uniform refinement - half map A emd_18310_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 640 640 640 0 0 0 640 640 640 531.2 531.2 531.2 90.0 90.0 90.0 X Y Z -0.41265255 0.42848974 0.00006791692 0.05347797 0.83000004 0.83000004 0.83000004 AUTHOR Helical map A&C, non-uniform refinement - half map B