2023-11-29 REL PDBe PDBe PDBe 2023-08-14 2023-10-18 2023-10-18 2023-11-29 The Francis Crick Institute FC001065 United Kingdom European Research Council (ERC) 820102 European Union Marie Sklodowska-Curie Actions, FragNET ITN 845939 European Union Wellcome Trust 215510/Z/19/Z United Kingdom Biotechnology and Biological Sciences Research Council (BBSRC) BB/T001860/1 United Kingdom X. laevis CMG dimer bound to dimeric DONSON - MCM ATPase Cvetkovic MA Costa A DNA replication initiation, Xenopus egg extract, primordial dwarfism, replicative helicase, genome stability, REPLICATION Cvetkovic MA Passaretti P Butryn A Reynolds-Winczura A Kingsley G Skagia A Fernandez-Cuesta C Poovathumkadavil D George R Chauhan AS Jhujh SS Stewart GS Gambus A Costa A The structural mechanism of dimeric DONSON in replicative helicase activation. Mol.Cell US 83 4017 2023 37820732 doi:10.1016/j.molcel.2023.09.029 1097-2765 2168 MOCEFL 8q6p FULLOVERLAP X. laevis CMG dimer bound to dimeric DONSON X. laevis CMG dimer bound to dimeric DONSON 0 1 2 3 4 5 6 7 Xenopus laevis 1.54 DNA replication licensing factor mcm2 Xenopus laevis 0.10039764799999999 1 LEVO MADSSESFNIATSPRAGSRRDALTSSPGRDLPPFEDESEGMFGDGVVPEEEEDGEELIGDAMERDYRPISELDRYEVEGL DDEEDVEDLTASQREAAEQSMRMRDREMGRELGRMRRGLLYDSDEEEEDRPARKRRMAERAAEGAPEEDEEMIESIENLE DMKGHTVREWVSMAATRLEIYHRFKNFLRTHVDEHGHNVFKEKISDMCKENKESLPVNYEDLAAREHVLAYFLPEAPAEM LKIFDEAAKEVVLVMYPKYDRIAREIHVRISHLPLVEELRSLRQLHLNQLIRTSGVVTCCTGVLPQLSMVKYNCNKCNFI LGPFFQSQNQEVRPGSCPECQSFGPFEINMEETVYQNYQRITIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELT GIYHNNYDGSLNTANGFPVFATVILANHITKKDDKVAVGELTDEDVKAIVALSKDERIGERIFASIAPSIYGHEDIKRGL ALALFGGEAKNPGGKHKVRGDINVLLCGDPGTAKSQFLKYVEKVASRAVFTTGQGASAVGLTAYVQRHPVTKEWTLEAGA LVLADRGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAASNPIGGRYDPSLTFSENVDLTEPIVS RFDILCVVRDTVDPVQDEMLARFVVSSHIKHHPSSKDIANGDAAEFALPNTFGVEALPQEVLKKYIMYAKEKIRPKLNQM DQDKVAKMYSDLRKESMATGSIPITVRHIESMIRMAEAHARMHLRDYVVEDDVNMAIRVMLESFIDTQKFSVMRSMRKTF ARYLAFRRDNNELLLFVLKQLIAEQVTYQRNRYGAQQDTIEVPEKDLVDKARQINIHNLSAFYDSDLFKMNKFTHDVKKK LIIQQF P55861 3.6.4.12 Maternal DNA replication licensing factor mcm3 Xenopus laevis 0.09053649999999999 1 LEVO MDYGGGFEDHELREAQREYLDFLDDDQDQGLYHGKVRDMIGSNEHRLIVNLNDVRRKNDKRANLMLNDAFAETIAFQRAL KDLVASIDATYAKQFEEFSVGFEGSFGSKHVSPRTLTASLLGSLVCVEGIVTKCSLVRPKVMRSVHYCPATKKTLERKYS DLTSLEAFPSSSIYPTKDEENNPLETEYGLSTYKDHQTLSIQEMPEKAPAGQLPRSVDIIADDDLVDKCKPGDRVQIVGI YRCLPSKQGGFTSGTFRTILLANNIKLMSKEIAPTFSADDVAKIKKFCKAHSKDIFEHLSKSLAPSIHGHEYIKKAILCM LLGGNEKVLENGTRIRGDINVLLIGDPSVAKSQLLRYVLHTAPRAIPTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVL ADRGVVCIDEFDKMSDMDRTAIHEVMEQGRVTIAKAGIQARLNARCSVLAAANPVYGRYDQYRTPMENIGLQDSLLSRFD LLFIVLDKMDADNDQEIADHVLRMHRYRTPGEQDGYALPLGCSVEIFATDDPNASDVTDQELQIYEKHDNLLHGPRKNKS KIVSMQFIRKYIHVAKLIKPVLTSEAADYISQEYAKIRNHDQINNDSARTMPVTARALETMIRLSTAHAKVRMSKTIERQ DAETALELVQFAYFKKVLAKEKKKTDKDLHDENLSQDTLSQESVRKSSRRAGKIADSQDDSMDPYSFSEQDSSLNENLSQ SLRPQRKKAESQDGKRSLSQNRTKEFKAALLKAFKSSRSQSVAVSQLLELINKGNPEPFERSEVKEALDNMQNDNQVMVS EDVVFLI P49739 3.6.4.12 DNA replication licensing factor mcm4-B Xenopus laevis 0.09725630499999999 1 LEVO MSSPTSTPSRRRNKRGRGSNPPTPHGEEVQSPPSQRRRTEDSTSIGELLPMPTSPSGDVQSPSGQELLFSSPAPSRHSAH QSELDLSSPLTYGTPSSRVEGTPRSGIRGTPARQRPDLGSARKVKQVDLHSDQPAAEELVTSEQSLGQKLVIWGTDVNVA TCKEKFQRFVQRFIDPSAKEEDNVGLDLNEPIYMQRLEEINVVGDPFLNIDCDHLRNFDQDLYRQLVCYPQEVIPTFDMA ANEIFFERYPDSILEHQIQVRPYNALKTRNMRSLNPEDIDQLITISGMVIRTSQIIPEMQEAFFKCQVCAFTTRVEIDRG RIAEPSVCKHCNTTHSMALIHNRSMFSDKQMIKLQESPEDMPAGQTPHTTILYGHNDLVDKVQPGDRVNVTGIYRAVPIR VNPRVRNVKSVYKTHIDVIHYRKTDSKRLHGIDEDTEQKLFTEERVAMLKELAAKPDIYERLAAALAPSIYEHEDIKKGI LLQLFGGTRKDFSHTGRGKFRAEVNILLCGDPGTSKSQLLQYVFNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQT GALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPVESQWNPKKTTIENIQLPHTL LSRFDLIFLMLDPQDEAYDRRLAHHLVALYYQSEEQMKEEHLDMAVLKDYIAYARTYVNPRLSEEASQALIEAYVSMRKI GSGRGMVSAYPRQLESLIRLSEAHAKVRFSNKVETIDVEEAKRLHREALKQSATDPRTGIVDISILTTGMSATARKRKEE LAQVLKKLIQSKGKTPALKYQQLFEDLRGQSDAAITKDMFDEALHALADDDYLTVTGKTVRLL P30664 3.6.4.12 DNA replication licensing factor mcm5-A Xenopus laevis 0.082556414 1 LEVO MSGFDDLGVYYSDSFGGEQQVGDDGQAKKSQLKKRFREFLRQYRIGTDRTGFTFKYRDELKRHYNLGEYWIEVEMEDLAS FDEDLADYLYKQPTEHLQLLEEAAQEVADEVTRPRPAGEETIQEIQVMLRSDANPANIRSLKSEQMSHLVKIPGIIIAAT AVRAKATKISIQCRSCRNTIGNIAVRPGLEGYAMPRKCNTEQAGRPNCPLDPYFIIPDKCKCVDFQTLKLQESPDAVPHG ELPRHMQLYCDRYLCDKVVPGNRVTIMGIYSIRKSGKTSTKGRDRVGVGIRSSYIRVVGIQVDTEGTGRSAAGAITPQEE EEFRRLAAKPDIYETVAKSIAPSIYGSSDIKKAIACLLFGGSRKRLPDGLTRRGDVNLLMLGDPGTAKSQLLKFVERCSP IGVYTSGKGSSAAGLTASVMRDPVSRNFIMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLN SRCSVLAAANSVYGRWDDTKGEENIDFMPTILSRFDMIFIVKDEHNEQRDMTLAKHVMNVHLSARTQSSSVEGEVDLNTL KKYIAYCRAKCGPRLSAEAAEKLKNRYILMRSGAREHERETEKRSSIPITVRQLEAIVRISESLGKMKLQPFATETDVEE ALRLFQVSTLDAAMSGSLSGVEGFTTQEDQEMLSRIEKQMKKRFAIGSQVSEHSIIQDFLKQKYPEHAIHKVLSLMMRRG EIQHRLQRKVLYRIK P55862 3.6.4.12 Maternal DNA replication licensing factor mcm6 Xenopus laevis 0.09275296899999999 1 LEVO MELGGPAAAGDTDIAGQQLFKDELSDKCQKLFLEFLEECKGKDGSNLYVSAAEELIRPERNTLAVNFTDIEYYNQQLATT IQEEYYRVYPHLCRAVRSFARQMGNIPANKEFYIAFSDFPARQKIRELSSAKIGTLLRISGQVVRTHPVHPELVSGTFLC MDCQSIVKDVEQQFRYTQPTICKNPVCANRRRFTLDTNKSRFVDFQKVRIQETQAELPRGAIPRSVEIILRAEAVESAMA GDRCDFTGTLIVVPDVSALAAGDARMETGAKVTGGEGFNSEGVQGLKALGVRDLSYRLAFLACYVGATNPRFGGKDLREE DQTAESIKNQMTVQEWEKVFEMSQDKNLYHNLCTSLFPTIHGNDEIKRGVLLMLFGGVPKTTMEGTSLRGDINVCIVGDP STSKSQFLKHVEEFSPRAVYTSGKASSAAGLTAAVVKDEESHEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAIHEAME QQTISITKAGVKATLNARTSILAAANPVGGRYERSKSLKHNVNLSAPIMSRFDLFFILVDECNEVTDYAIARRIVDLHAR NEESIERVYSIEDIQRYLLFARQFQPKITKEAEEFIVEQYRRLRQRDGSGVAKSSWRITVRQLESLIRLSESMARMHCSD EVQPKHVKEAFRLLSKSIIRVDTPDVSFDQGEDEKNIEGENNGNLNNGEEAMETNQDEPINEKPSSNAGLKMSFAEYKQI SNLLVLYMQKMEETEEECHLTTTDLVNWYLKEMEAEIETETELILKKRLIEKVIHRLIYYDHILIELNKSELKTMDDTKE TGEDAAEDRILVVNPNYMLED Q5FWY4 3.6.4.12 DNA replication licensing factor mcm7-B Xenopus laevis 0.081841539 1 LEVO MPRDYQAEKEKCKTFLQEFYKDDEFGKKNFKYGVQLANIAHREQVALCIDLDDLAEEDPELVDAICENTRRYTNLFADAV QELLPQYKEREVVHKDALDVYIEHRLMMEQRGRDPNEMRDPHNQYPPELMRRFELYFKAPSSSKARVVRDVKADSIGKLV TVRGIVTRVTEVKPMMVVATYTCDQCGAETYQPIQSPTFMPLIMCPSRECQTNRSGGRLYLQTRGSKFIKFQELKIQEHS DQVPVGNIPRCMSVYVRGENTRLAQPGDHVGITGVFLPMLRTGFRQVVQGLLSETYLESHRLVKMNKTEDDELGTEELSE EELRQITEEDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDHSPRGMKIRGNINVCLMGDPGVAKSQLLSYIDRLAPRS QYTTGRGSSGVGLTAAVMKDPVTGEMTLEGGALVLADQGVCCIDEFDKMMDSDRTAIHEVMEQQTISIAKAGIMTTLNAR CSILAAANPAYGRYNPKKTVEQNIQLPAALLSRFDLLWLIQDKPDRDNDLRLAQHITYVHQHSKQPPSQFQPMDMKLMRR YITMCKSKQPAIPESLADYLTAAYVEMRKEARTNKDMTFTSARTLLSILRLSTALARLRLEDVVEKEDVNEAMRLTEMSK DSLQGDKGHASRTQRPADVIFSTIREMVPEKGARSVKYSEAEQRCVSKGFTPAQFEAALEEYEELNVWLVNQARTKITFV Q7ZXB1 3.6.4.12 Protein downstream neighbor of son homolog Xenopus laevis 0.063864559 1 LEVO MAELLPGYSPSFKKPSEILRLSRRRSRSEASKTGLSPFSPGDVIKRVPGLRPFSPGPNKGAGVKRRNPFASLENTVCSPV KRRAETVAEYGAASLEPRALSAVRPSCLGQDSPEPPQFNSVEDVIWGDPLAADADPLVKTESPEKPAPACEIPKGSVTFP ADWSLKTRLLFTSSHSFSWADHLKAQEEAQGLVMQCRATAVNLPHSIQEPKLSTDLRCAFQQSLVHWIHPSLPWVQLFPR IGVDRKMAGKNTPWSQDESLQQVLMSEWALSFTSLYNLLKAKLCPYFYVCTYQFTVLFRAAGLAGSDVITAVMSPTTRGL REAMKNEGITFSQPLVEDDTGKKQKKPEAASQGDINPEKENGTAEADEASDESDEDESFSWLEEMGVEDKIKKPDSISIK LRKEKNEVKLDHKPESVVLVKGTNTFTLLNFLINCKSIVAAAGLQAGLPPTLLSPVAFRGATMHALKARSVNVKTRVNSG YKDQFSLEITGPIMPHSLHSLTMLLQSAQRGSFSAGLYTHEPTAVFNTPIHSQAVKEISADLQNCGLHPCTVEQLTQVNE LGKLSLRHLEMTDYRYTWK Q5U4U4 ADENOSINE-5'-TRIPHOSPHATE 0.000507181 5 ATP singleParticle particle 7.5 ETHANE FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 1.3 3.4 FEI FALCON IV (4k x 4k) 33.0 1 3.53 FSC 0.143 CUT-OFF 144989 PROJECTION MATCHING PROJECTION MATCHING emd_18192.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 540 540 540 0 0 0 540 540 540 513.0 513.0 513.0 90.0 90.0 90.0 X Y Z -1.3077148 1.8445758 0.00021190722 0.027067706 0.95 0.95 0.95 0.15 AUTHOR emd_18192_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 540 540 540 0 0 0 540 540 540 513.0 513.0 513.0 90.0 90.0 90.0 X Y Z -0.85759395 0.95185465 0.00021206375 0.08764245 0.95 0.95 0.95 AUTHOR emd_18192_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 540 540 540 0 0 0 540 540 540 513.0 513.0 513.0 90.0 90.0 90.0 X Y Z -0.832186 0.91276044 0.00020267785 0.08834186 0.95 0.95 0.95 AUTHOR