<emd xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" emdb_id="EMD-1816" version="3.0.1.1" xsi:schemaLocation="https://github.com/emdb-empiar/emdb-schemas/blob/master/v3/v3_0_1_1/emdb_relaxed.xsd">
   <admin>
      <current_status>
         <code>REL</code>
         <processing_site>PDBe</processing_site>
      </current_status>
      <sites>
         <deposition>PDBe</deposition>
         <last_processing>PDBe</last_processing>
      </sites>
      <key_dates>
         <deposition>2010-10-27</deposition>
         <header_release>2010-12-09</header_release>
         <map_release>2010-12-16</map_release>
         <update>2011-02-04</update>
      </key_dates>
      <title>Structure of S. cerevisiae anaphase promoting complex</title>
      <authors_list>
         <author>daFonseca PCA</author>
         <author>Kong EH</author>
         <author>Zhang Z</author>
         <author>Schreiber A</author>
         <author>Williams MA</author>
         <author>Morris EP</author>
         <author>Barford D</author>
      </authors_list>
      <keywords>Anaphase promoting complex, cyclosome, APC, APC/C, cell cycle, D-box, KEN-box, co-activator, Cdh1, tetraticopeptide repeats, TPR, ubiquitylation, cyclin</keywords>
   </admin>
   <crossreferences>
      <citation_list>
         <primary_citation>
            <journal_citation published="true">
               <author order="1">da Fonseca PC</author>
               <author order="2">Kong EH</author>
               <author order="3">Zhang Z</author>
               <author order="4">Schreiber A</author>
               <author order="5">Williams MA</author>
               <author order="6">Morris EP</author>
               <author order="7">Barford D</author>
               <title>Structures of APC/C(Cdh1) with substrates identify Cdh1 and Apc10 as the D-box co-receptor.</title>
               <journal>NATURE</journal>
               <volume>470</volume>
               <first_page>274</first_page>
               <last_page>278</last_page>
               <year>2011</year>
               <external_references type="PUBMED">21107322</external_references>
               <external_references type="DOI">doi:10.1038/nature09625</external_references>
            </journal_citation>
         </primary_citation>
      </citation_list>
   </crossreferences>
   <sample>
      <name>S. cerevisiae anaphase promoting complex</name>
      <supramolecule_list>
         <sample_supramolecule supramolecule_id="1000">
            <name>S. cerevisiae anaphase promoting complex</name>
            <number_unique_components>1</number_unique_components>
         </sample_supramolecule>
      </supramolecule_list>
      <macromolecule_list>
         <protein_or_peptide macromolecule_id="1">
            <name synonym="Anaphase promoting complex or cyclosome">Anaphase promoting complex</name>
            <natural_source database="NCBI">
               <organism ncbi="4932">Saccharomyces cerevisiae</organism>
               <synonym_organism>Baker's yeast</synonym_organism>
            </natural_source>
            <recombinant_exp_flag>false</recombinant_exp_flag>
            <recombinant_expression database="NCBI">
               </recombinant_expression>
            <sequence>
               </sequence>
         </protein_or_peptide>
      </macromolecule_list>
   </sample>
   <structure_determination_list>
      <structure_determination structure_determination_id="1">
         <method>singleParticle</method>
         <aggregation_state>particle</aggregation_state>
         <specimen_preparation_list>
            <single_particle_preparation preparation_id="1">
               <staining>
                  <type>NEGATIVE</type>
                  <details>Grids were stained using 2% w/v uranyl acetate</details>
               </staining>
               <vitrification>
                  <cryogen_name>NONE</cryogen_name>
                  <instrument>OTHER</instrument>
               </vitrification>
            </single_particle_preparation>
         </specimen_preparation_list>
         <microscopy_list>
            <single_particle_microscopy microscopy_id="1">
               <microscope>FEI TECNAI F20</microscope>
               <illumination_mode>FLOOD BEAM</illumination_mode>
               <imaging_mode>BRIGHT FIELD</imaging_mode>
               <electron_source>FIELD EMISSION GUN</electron_source>
               <acceleration_voltage units="kV">200</acceleration_voltage>
               <nominal_magnification>50000.0</nominal_magnification>
               <specimen_holder_model>OTHER</specimen_holder_model>
               <details>Sample stained using uranyl acetate and imaged at room temperature</details>
               <image_recording_list>
                  <image_recording>
                     <film_or_detector_model category="CCD">TVIPS TEMCAM-F415 (4k x 4k)</film_or_detector_model>
                     <average_electron_dose_per_image units="e/&#8491;^2">100</average_electron_dose_per_image>
                  </image_recording>
               </image_recording_list>
               <specimen_holder>Room temperature side entry</specimen_holder>
            </single_particle_microscopy>
         </microscopy_list>
         <singleparticle_processing image_processing_id="1">
            <final_reconstruction>
               <applied_symmetry>
                  <point_group>C1</point_group>
               </applied_symmetry>
            </final_reconstruction>
         </singleparticle_processing>
      </structure_determination>
   </structure_determination_list>
   <map format="CCP4" size_kbytes="10720">
      <file>emd_1816.map.gz</file>
      <symmetry>
         <space_group>1</space_group>
      </symmetry>
      <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
      <dimensions>
         <col>140</col>
         <row>140</row>
         <sec>140</sec>
      </dimensions>
      <origin>
         <col>-70</col>
         <row>-69</row>
         <sec>-70</sec>
      </origin>
      <spacing>
         <x>140</x>
         <y>140</y>
         <z>140</z>
      </spacing>
      <cell>
         <a units="&#8491;">485.8</a>
         <b units="&#8491;">485.8</b>
         <c units="&#8491;">485.8</c>
         <alpha units="deg">90</alpha>
         <beta units="deg">90</beta>
         <gamma units="deg">90</gamma>
      </cell>
      <axis_order>
         <fast>X</fast>
         <medium>Y</medium>
         <slow>Z</slow>
      </axis_order>
      <statistics>
         <minimum>-0.570244</minimum>
         <maximum>0.778935</maximum>
         <average>0.00189746</average>
         <std>0.0320825</std>
      </statistics>
      <pixel_spacing>
         <x units="&#8491;">3.47</x>
         <y units="&#8491;">3.47</y>
         <z units="&#8491;">3.47</z>
      </pixel_spacing>
      <contour_list>
         <contour primary="true">
            <level>0.12</level>
            <source>EMDB</source>
         </contour>
      </contour_list>
      <annotation_details>Structure of the S. cerevisiae anaphase promoting complex</annotation_details>
      <details>::::EMDATABANK.org::::EMD-1816::::</details>
   </map>
</emd>