2024-10-02 REL PDBe PDBe PDBe 2023-07-19 2024-04-24 2024-04-24 2024-10-02 European Research Council (ERC) 101020697 European Union C respirasome from murine liver Vercellino I Sazanov LA Respiratory chain super complex, mammalian mitochondria, MEMBRANE PROTEIN Vercellino I Sazanov LA SCAF1 drives the compositional diversity of mammalian respirasomes. Nat.Struct.Mol.Biol. US 31 1061 1071 2024 38575788 doi:10.1038/s41594-024-01255-0 1545-9985 Afonine PV Adams PD Real-space refinement in PHENIX for cryo-EM and crystallography Acta Crystallogr., Sect. D: Biol. Crystallogr. DK 74 531 544 2018 0907-4449 0766 ABCRE6 EMD-18017 focused EM volume
focused map
 EMD-18018 focused EM volume
focused map
 EMD-18019 focused EM volume
focused map
 EMD-18020 focused EM volume
focused map
 EMD-18021 consensus EM volume
consensus map
 8pw6 FULLOVERLAP C respirasome from murine liver C respirasome from murine liver 0 1 2 3 4 5 6 7 8 9 10 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 11 12 13 14 15 16 17 18 19 20 21 22 23 Mus musculus CD1 liver mitochondria 1.7 Cytochrome b-c1 complex subunit 1, mitochondrial Mus musculus CD1 0.052910594 2 LEVO MAASAVCRAACSGTQVLLRTRRSPALLRLPALRGTATFAQALQSVPETQVSILDNGLRVASEQSSHATCTVGVWIDAGSR YETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQ IEKERDVILREMQENDASMQNVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQ QLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIRHRDDALPLAHVAIAVEGPGWANPDNVTLQVANAIIGHYDCTYGG GVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVCDAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALV SHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF Q9CZ13 Cytochrome b-c1 complex subunit 2, mitochondrial Mus musculus CD1 0.04828973 2 LEVO MKLLSRAGSFSRFYSLKVAPKVKTSAAPGGVPLQPQDLEFTKLPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTS HLLRLASSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPEFRRWEVAALRSQLKI DKAVAFQNSQTRIIENLHDVAYKNALANPLYCPDYRMGKITSEELHYFVQNHFTSARMALVGLGVSHSVLKQVAEQFLNM RGGLGLAGAKAKYRGGEIREQNGDNLVHAAIVAESAAIGNAEANAFSVLQHLLGAGPHIKRGNNTTSLLSQSVAKGSHQP FDVSAFNASYSDSGLFGIYTISQAAAAGEVINAAYNQVKAVAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQA LAAGSYMPPSTVLQQIDSVADADVVKAAKKFVSGKKSMAASGNLGHTPFLDEL Q9DB77 Cytochrome b Mus musculus CD1 0.043240305 2 LEVO MTNMRKTHPLFKIINHSFIDLPAPSNISSWWNFGSLLGVCLMVQIITGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIR YMHANGASMFFICLFLHVGRGLYYGSYTFMETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL VEWIWGGFSVDKATLTRFFAFHFILPFIIAALAIVHLLFLHETGSNNPTGLNSDADKIPFHPYYTIKDILGILIMFLILM TLVLFFPDMLGDPDNYMPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILALMPFLHTSKQRSLMFRPI TQILYWILVANLLILTWIGGQPVEHPFIIIGQLASISYFSIILILMPISGIIEDKMLKLYP P00158 Cytochrome c1, heme protein, mitochondrial Mus musculus CD1 0.035374652 2 LEVO MAAAAASLRRTVLGPRGVGLPGASAPGLLGGARSRQLPLRTPQAVSLSSKSGPSRGRKVMLSALGMLAAGGAGLAVALHS AVSASDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYRHLVGVCYTEEEAKALAEEVEVQDGPND DGEMFMRPGKLSDYFPKPYPNPEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQ AIGMAPPIYTEVLEYDDGTPATMSQVAKDVATFLRWASEPEHDHRKRMGLKMLLMMGLLLPLTYAMKRHKWSVLKSRKLA YRPPK Q9D0M3 7.1.1.8 Cytochrome b-c1 complex subunit Rieske, mitochondrial Mus musculus CD1 0.029406634999999997 3 LEVO MLSVAARSGPFAPVLSATSRGVAGALRPLLQGAVPAASEPPVLDVKRPFLCRESLSGQAAARPLVATVGLNVPASVRFSH TDVKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIP EGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHG SHYDASGRIRKGPAPLNLEVPAYEFTSDDVVVVG Q9CR68 7.1.1.8 Cytochrome b-c1 complex subunit 7 Mus musculus CD1 0.013587532 2 LEVO MAGRSAVSASSKWLDGFRKWYYNAAGFNKLGLMRDDTLHETEDVKEAIRRLPEDLYNDRMFRIKRALDLTMRHQILPKDQ WTKYEEDKFYLEPYLKEVIRERKEREEWAKK Q9CQB4 Cytochrome b-c1 complex subunit 8 Mus musculus CD1 0.009783245000000001 2 LEVO MGREFGNLARIRHVISYSLSPFEQRAFPSYFSKGIPNVLRRTRERILRVAPPFVVVYLIYTWGNQEFEQSKRKNPAMYEN DK Q9CQ69 Cytochrome b-c1 complex subunit 6, mitochondrial Mus musculus CD1 0.010452693999999998 2 LEVO MGLEDERKMLTGSGDPKEEEEEELVDPLTTVREHCEQLEKCVKARERLELCDNRVSSRSQTEEDCTEELFDFLHARDHCV AHKLFKNLK P99028 Cytochrome b-c1 complex subunit 9 Mus musculus CD1 0.007457526 2 LEVO MSSPTIPSRLYSLLFRRTSTFALTIAVGALFFERAFDQGADAIYEHINEGKLWKHIKHKYENKE Q8R1I1 Cytochrome b-c1 complex subunit 10 Mus musculus CD1 0.006546627 2 LEVO MLSRFLGPRYRELARNWIPTAGMWGTVGAVGLVWATDWRLILDWVPYINGKFKKDD Q9CPX8 Cytochrome c oxidase subunit 1 Mus musculus CD1 0.056945641 1 LEVO MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSILIRAELGQPGALLGDDQIYNVIVTAHAFVMIFFMVMPMMIGGFGN WLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILG AINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGH PEVYILILPGFGIISHVVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGLDVDTRAYFTSATMIIAIPTGVKV FSWLATLHGGNIKWSPAMLWALGFIFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLF SGFTLDDTWAKAHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTTWNTVSSMGSFISLTAVLIMIFMIWEAFASKR EVMSVSYASTNLEWLHGCPPPYHTFEEPTYVKVK P00397 7.1.1.9 Cytochrome c oxidase subunit 2 Mus musculus CD1 0.025993317999999998 1 LEVO MAYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPS LRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVL HSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKYFENWSASMI P00405 7.1.1.9 Cytochrome c oxidase subunit 3 Mus musculus CD1 0.029948688999999997 1 LEVO MTHQTHAYHMVNPSPWPLTGAFSALLLTSGLVMWFHYNSITLLTLGLLTNILTMYQWWRDVIREGTYQGHHTPIVQKGLR YGMILFIVSEVFFFAGFFWAFYHSSLVPTHDLGGCWPPTGISPLNPLEVPLLNTSVLLASGVSITWAHHSLMEGKRNHMN QALLITIMLGLYFTILQASEYFETSFSISDGIYGSTFFMATGFHGLHVIIGSTFLIVCLLRQLKFHFTSKHHFGFEAAAW YWHFVDVVWLFLYVSIYWWGS P00416 7.1.1.9 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial Mus musculus CD1 0.019558479 1 LEVO MLASRALSLIGKRAISTSVCLRAHGSVVKSEDYAFPTYADRRDYPLPDVAHVTMLSASQKALKEKEKADWSSLSRDEKVQ LYRIQFNESFAEMNRGTNEWKTVVGMAMFFIGFTALVLIWEKSYVYGPIPHTFDRDWVAMQTKRMLDMKANPIQGFSAKW DYDKNEWKK P19783 Cytochrome c oxidase subunit 5A, mitochondrial Mus musculus CD1 0.016123474 1 LEVO MLAAALRRCTAAAAARGLLHPASAPSPAAAVCSIRCYSHGSHETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVP EPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV P12787 Cytochrome c oxidase subunit 5B, mitochondrial Mus musculus CD1 0.013831896 1 LEVO MASRLLRGVGALAAQALRRTARGAAVTRSMASGGGVPTDEEQATGLEREIMIAAQKGLDPYNMLPPKAASGTKEDPNLVP SISNKRIVGCICEEDNCTVIWFWLHKGESQRCPNCGTHYKLVPHQMAH P19536 Cytochrome c oxidase subunit 6A1, mitochondrial Mus musculus CD1 0.012372148 1 LEVO MASAVLSASRVSRPLGRALPGLRRPMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSRHEEHERPPFVAYPHLR IRTKPFPWGDGNHTLFHNPHVNPLPTGYEDE P43024 Cytochrome c oxidase subunit 6B1 Mus musculus CD1 0.010086465 1 LEVO MAEDIKTKIKNYKTAPFDSRFPNQNQTKNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPVSWVSAWDDRIAEG TFPGKI P56391 Cytochrome c oxidase subunit 6C Mus musculus CD1 0.008484021 1 LEVO MSSGALLPKPQMRGLLAKRLRVHIAGAFIVALGVAAAYKFGVAEPRKKAYAEFYRNYDSMKDFEEMRKAGIFQSAK Q9CPQ1 Cytochrome c oxidase subunit 7B, mitochondrial Mus musculus CD1 0.009023351 1 LEVO MLPLAKNALSRLQVRSIQQVVARQSHQKRAPSFHDKYGNAILAGGAIFCVSTWTYTATQIGIEWNMSPVGRVTPKEWRDQ P56393 Cytochrome c oxidase subunit 7C, mitochondrial Mus musculus CD1 0.0073446349999999995 1 LEVO MLGQSIRRFTTSVVRRSHYEEGPGKNLPFSVENKWRLLAMMTVYFGSGFAAPFFIVRHQLLKK P17665 Cytochrome c oxidase subunit 8A, mitochondrial Mus musculus CD1 0.0076591639999999996 1 LEVO MSVLTPLLLRSLTGSARRLMVPRAQVHSKPAREQLGVLDITIGLTSCFVCCLLPAGWVLSHLESYKKRE Q64445 Cytochrome c oxidase subunit 7A2, mitochondrial Mus musculus CD1 0.009304891999999999 1 LEVO MLRNLLALRQIAQRTISTTSRRHFENKVPEKQKLFQEDNGMPVHLKGGASDALLYRATMALTLGGTAYAIYLLAMAAFPK KQN P48771 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial Mus musculus CD1 0.024715912 1 LEVO MAALAAPGLLSVRILGLRTAQVQLRRVHQSVATEGPSPSPSPSLSSTQSAVSKAGAGAVVPKLSHLPRSRAEYVVTKLDD LINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVS MGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR Q9DC70 7.1.1.2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial Mus musculus CD1 0.030191307 1 LEVO MAAAAARVWCRGLLGAASVGRGAGRPSVLWQHVRRESAAADKRPTVRPRSDVTHKQLSAFGEYVAEILPKYVQQVQVSCL DELEICIHPDGVIPTLTFLRDHTNAQFKSLADLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTPIDSIVSVHI AANWYEREVWDMFGVFFFNHPDLRRILTDYGFEGHPFRKDFPLTGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEA FPAYRQPPESLKLEAGDKKPETK Q9DCT2 7.1.1.2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial Mus musculus CD1 0.052720602 1 LEVO MAALRALRCLRGVGAPVLRPGSGIRLPSQPSRGARQWQPDIEWAEQFSGAVMYPSKETAHWKPPPWNDVDILKEKAVTNM TLNFGPQHPAAHGVLRLVLELSGEMVRKCDPHIGLLH(2MR)GTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSIAVE KLLNIQPPPRAQWIRVLFGEITRILNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYERVSGARMHAAYIRPGGVHQDL PLGLLDDIYEFSKNFSLRIDEVEEMLTNNRIWRNRTVDIGVVTAEDALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEF DVPIGSRGDCYDRYLCRVEEMRQSLRIIEQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGAT YTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEIDR Q91WD5 7.1.1.2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Mus musculus CD1 0.027318336 1 LEVO MFSLALRARATGLAAQWGRHARNLHKTAVHNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHQAAAVLP VLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRDSDSILETLQRKLGIKVG ETTPDKLFTLIEVECLGACVNAPMVQINDNYYEDLTPKDIEEIIDELKAGKVPKPGPRSGRFCCEPAGGLTSLTEPPKGP GFGVQAGL Q9D6J6 7.1.1.2 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Mus musculus CD1 0.050904152 1 LEVO MLAARHFLGGLVPVRVSVRFSSGTTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGALRRGDWYKTKEILLKGPDWILGEM KTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGGRAMGARAAYIYIRG EFYNEASNLQVAIREAYEAGLIGKNACGSDYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPT TVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPG GSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFV KGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEDRMQRFAQQHRAWQAAS Q91YT0 7.1.1.2 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial Mus musculus CD1 0.07986668799999999 1 LEVO MLRIPIKRALIGLSNSPKGYVRTTGTAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLV EIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLEGKRAV EDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNVIDICPVGALTSKPYAFTA RPWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTEPMVRNEKGLLTYTSWE DALSRVAGMLQNFEGNAVAAIAGGLVDAEALVALKDLLNKVDSDNLCTEEIFPTEGAGTDLRSNYLLNTTIAGVEEADVV LLVGTNPRFEAPLFNARIRKSWLHNDLKVALIGSPVDLTYRYDHLGDSPKILQDIASGRHSFCEVLKDAKKPMVVLGSSA LQRDDGAAILVAVSNMVQKIRVTTGVAAEWKVMNILHRIASQVAALDLGYKPGVEAIRKNPPKMLFLLGADGGCITRQDL PKDCFIVYQGHHGDVGAPMADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGITLPYDTLD QVRNRLEEVSPNLVRYDDIEETNYFQQASELAKLVNQEVLADPLVPPQLTIKDFYMTDSISRASQTMAKCVKAVTEGAQA VEEPSIC Q91VD9 7.1.1.2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial Mus musculus CD1 0.024068355 1 LEVO MYRLSSSMLPRALAQAMRTGHLNGQSLHSSAVAATYKYVNKKEQESEVDMKSATDNAARILMWTELIRGLGMTLSYLFRE PATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQE ACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEIAANIQADYLYR Q8K3J1 7.1.1.2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial Mus musculus CD1 0.042588129 1 LEVO MAAAVRFRVVRALPMSRPAITAAATSVFCGSSHRQLHHAVIPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQV IIPYRCDVYDIMHLRLMGDLGQLTFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAG VERFIHVSHLNASMKSSSKSLRSKAVGEKEVRSVFPEAIIIRPSDIFGREDRFLNHFANYRWFLAVPLVSLGFKTVKQPV YVADVSKGIVNATKDPDAVGKTFAFTGPNRYLLFHLVKYIFGMTHRTFIPYPLPLFVYSWIGKLFGLSPFEPWTTKDKVE RIHISDVMPTDLPGLEDLGVQPTPLELKSIEVLRRHRTYRWLSSEIEETKPAKTVNY Q9DC69 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial Mus musculus CD1 0.019814725 1 LEVO MAAVSISVSLRQAMLGRRAMATAAVSVCRVPSRLLSTSTWKLADNQTRDTQLITVDEKLDITTLTGVPEEHIKTRKVRIF VPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTADPLSNMVLTFSAKEDAIAFAEKNGWSYDVEEKKVPKPKSKSY GANFSWNKRTRVSTK Q9CXZ1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial Mus musculus CD1 0.013041827999999998 1 LEVO MAAVLTFRRLLTLPRAARGFGVQVSPSGEKITHTGQVYDEKDYRRVRFVDRQKEVNENFAIDLIAQQPVNEVEHRIIACD GGGGALGHPKVYINLDKETKTGTCGYCGLQFKQHHH P52503 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 Mus musculus CD1 0.010932675 1 LEVO MAAAAASRAVGAKLGLREIRVHLCQRSPGSQGVRDFIVQRYVELKKAHPNLPILIRECSEVQPKLWARYAFGQEKTVSLN NLSADEVTRAMQNVLSGKA Q9CQ75 Acyl carrier protein, mitochondrial Mus musculus CD1 0.017390289 2 LEVO MASRVLCACVRRLPAAFAPLPRLPTLALARPLSTTLCPEGIRRRPGALQSALALAQVPGTVTHLCRQYSDAPPLTLDGIK DRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADKKDVYE Q9CR21 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 Mus musculus CD1 0.013380719 1 LEVO MAGLLKKTTGLVGLAVCDTPHERLTILYTKTLDILKHFPKHAAYRKYTEQITNEKLDMVKAEPDVKKLEALLQGGEVEEV ILQAEKELSLARKMLKWKPWEPLVEEPPANQWKWPI Q9CPP6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 Mus musculus CD1 0.015311858 1 LEVO MAAAATGLRQAAAAAASTSVKPIFSRDLNEAKRRVRELYRAWYREVPNTVHLMQLDITVKQGRDKVREMFMKNAHVTDPR VVDLLVIKGKMELQETIKVWKQRTHVMRFFHETETPRPKDFLSKFYMGHDP Q9CQZ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 Mus musculus CD1 0.017112416000000002 1 LEVO MELVEVLKRGVQQVTGHGGLRGLLRVFFRANDIRIGTLVGEDKYGNKYYEDNKQFFGRHRWVIYTTEMNGKNTFWDVDGS MVPPEWHRWLHCMTDDPPTTNPPTARKFIWTNHKFNVSATPEQYVPYSTTRKKIHEWVPPSTPYK Q7TMF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 Mus musculus CD1 0.012637629000000001 1 LEVO M(AYA)SATRVIQKLRNWASGQDLQAKLQLRYQEIAKRTQPPPKLPVGPSHKLSNNYYCTRDGRREVVPPSIIMSSQKAL VSGKAAESSAMAATEKKAVTPAPPMKRWELSKDQPYL Q9Z1P6 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial Mus musculus CD1 0.011833504 1 LEVO MAVSLLLRGGRIRALKAVLLEARVFPGELVSVVRLSTESEKSAKEKELHPKTQSVLKEPEPTDTTTYKNLQHHDYNTYTF LDLNLDLSKFRLPQPSSGRESPRH Q8BK30 NADH-ubiquinone oxidoreductase chain 3 Mus musculus CD1 0.013251784999999999 1 LEVO (FME)NLYTVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLP WAIQTIKTSTMMIMAFILVTILSLGLAYEWTQKGLEWTE P03899 7.1.1.2 NADH-ubiquinone oxidoreductase chain 1 Mus musculus CD1 0.036105027 1 LEVO (FME)FFINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPT LSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLM NGSYSLQTLITTQEHMWLLLPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNA LTTIIFLGPLYYINLPELYSTNFMMEALLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFTAGVPP YM P03888 7.1.1.2 NADH-ubiquinone oxidoreductase chain 6 Mus musculus CD1 0.0186561 1 LEVO (FME)NNYIFVLSSLFLVGCLGLALKPSPIYGGLGLIVSGFVGCLMVLGFGGSFLGLMVFLIYLGGMLVVFGYTTAMATE EYPETWGSNWLILGFLVLGVIMEVFLICVLNYYDEVGVINLDGLGDWLMYEVDDVGVMLEGGIGVAAMYSCATWMMVVAG WSLFAGIFIIIEITRD P03925 7.1.1.2 NADH-ubiquinone oxidoreductase chain 4L Mus musculus CD1 0.010637629000000001 1 LEVO (FME)PSTFFNLTMAFSLSLLGTLMFRSHLMSTLLCLEGMVLSLFIMTSVTSLNSNSMSSMPIPITILVFAACEAAVGLA LLVKVSNTYGTDYVQNLNLLQC P03903 7.1.1.2 NADH-ubiquinone oxidoreductase chain 5 Mus musculus CD1 0.06854729700000001 1 LEVO (FME)NIFTTSILLIFILLLSPILISMSNLIKHINFPLYTTTSIKFSFIISLLPLLMFFHNNMEYMITTWHWVTMNSMEL KMSFKTDFFSILFTSVALFVTWSIMQFSSWYMHSDPNINRFIKYLTLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIG WWYGRTDANTAALQAILYNRIGDIGFILAMVWFSLNMNSWELQQIMFSNNNDNLIPLMGLLIAATGKSAQFGLHPWLPSA MEGPTPVSALLHSSTMVVAGIFLLVRFHPLTTNNNFILTTMLCLGALTTLFTAICALTQNDIKKIIAFSTSSQLGLMMVT LGMNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLADEQDIRKMGNITKIMPFTSSCLVIGSLALTGMPFLTGFYSKDLII EAINTCNTNAWALLITLIATSMTAMYSMRIIYFVTMTKPRFPPLISINENDPDLMNPIKRLAFGSIFAGFVISYNIPPTS IPVLTMPWFLKTTALIISVLGFLIALELNNLTMKLSMNKANPYSSFSTLLGFFPSIIHRITPMKSLNLSLKTSLTLLDLI WLEKTIPKSTSTLHTNMTTLTTNQKGLIKLYFMSFLINIILIIILYSINLE P03921 7.1.1.2 NADH-ubiquinone oxidoreductase chain 4 Mus musculus CD1 0.051943547 1 LEVO (FME)LKIILPSLMLLPLTWLSSPKKTWTNVTSYSFLISLTSLTLLWQTDENYKNFSNMFSSDPLSTPLIILTAWLLPLM LMASQNHLKKDNNVLQKLYISMLISLQILLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIG SIPLLIALILIQNHVGTLNLMILSFTTHTLDASWSNNLLWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILL KLGSYGMIRISIILDPLTKYMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLM IAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMVFPLMATWWLMASLANLALPPSINLMGELFITMSLFSWSNFTIILM GINIIITGMYSMYMIITTQRGKLTNHMINLQPSHTRELTLMALHMIPLILLTTSPKLITGLTM P03911 7.1.1.2 NADH-ubiquinone oxidoreductase chain 2 Mus musculus CD1 0.03880023 1 LEVO (FME)NPITLAIIYFTIFLGPVITMSSTNLMLMWVGLEFSLLAIIPMLINKKNPRSTEAATKYFVTQATASMIILLAIVL NYKQLGTWMFQQQTNGLILNMTLMALSMKLGLAPFHFWLPEVTQGIPLHMGLILLTWQKIAPLSILIQIYPLLNSTIILM LAITSIFMGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPSLTLLNLMIYIILTAPMFMALMLNNSMTINSISLLWNK TPAMLTMISLMLLSLGGLPPLTGFLPKWIIITELMKNNCLIMATLMAMMALLNLFFYTRLIYSTSLTMFPTNNNSKMMTH QTKTKPNLMFSTLAIMSTMTLPLAPQLIT P03893 7.1.1.2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial Mus musculus CD1 0.040657374999999996 1 LEVO MALRLLRLVPASAPARGLAAGAQRVGRIHTSVHCKLRYGLLAAILGDKTTKKLHEYSRVITVDGNICSGKNKLAKEIAQQ LGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEKFYDDPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLE RSIYSDFVFLEAMYNQGYIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHEMKVTSAYLQDIENA YKKTFLPKMSEMCEVLVYDSWEAEDPTKVVEDIEYLKYNKGPWLKQDDWTFHYLRMLVQDKTEVLNYTTIPVYLPEITIG AHQGSRIYNSFRELPGRKYAPGYNAEVGDKWIWLK Q99LC3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 Mus musculus CD1 0.020025127 1 LEVO MPGIVELPTLEELKVEEVKVSSAVLKAAAHHYGAQCDKTNKEFMLCRWEEKDPRRCLKEGKLVNGCALNFFRQIKSHCAE PFTEYWTCLDYSNMQLFRHCRQQQAKFDQCVLDKLGWVRPDLGQLSKVTKVKTDRPLPENPYHSRARPEPNPVIEGDLKP AKHGTRFFFWTV Q9DCJ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 Mus musculus CD1 0.014928143999999999 1 LEVO MVKRFFESYHEVPDGTQCHRKTYITTALGGICGIIGSAYSVSLNPADSTLEAVARVGRYTFTAAAIGAMFGLTTCVSAQV REKPDDPLNYFIGGCAGGLTLGARTHSYGTAAMGCVYMGTAAALFKIGKLEGWELFPTPKV G5E814 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 Mus musculus CD1 0.016881588 1 LEVO MAASKVKQDMPPPGGYGPIDYKRNLPRRGLSGYSMFAVGIGALIFGYWRMMRWNQERRRLLIEDLEARIALMPLFQAEKD RRTLQILRENLEEEAIIMKDVPNWKVGESVFHTTRWVPPLIGEMYGLRTKEEMSNANFGFTWYT Q9ERS2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 Mus musculus CD1 0.008149524 1 LEVO MWFEILPGLAIMGVCLVIPGVSTAYIHKFTNGGKEKRVARVQYQWYLMERDRRISGVNRYYVSKGLENID O35683 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 Mus musculus CD1 0.009380904 1 LEVO M(AYA)GRISAFLKNAWAKEPVLVVSFSVWGLAIIMPMISPYTKYASMINKATPYNYPVPVRDDGNMPDVPSHPQDPLGP SLDWLKNL Q9CQ91 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial Mus musculus CD1 0.008636023 1 LEVO MAPSVVLRSFSRLLAPARLPSCSSTRSKFYVREPVNAKPNWLAVGLSVGASVFMWIYLIQTHNEDVLEYKRRNGLE Q9CQY9 NADH dehydrogenase [ubiquinone] 1 subunit C2 Mus musculus CD1 0.014185691999999998 1 LEVO MMNGRPGHEPLKFLPDEARSLPPPKLNDPRLVYMGLLGYCTGLMDNMLRMRPVMRAGLHRQLLFVTSFVFAGYFYLKRQN YLYAVKDHDMFGYIKLHPEDFPEKEKKTYAEILEPFHPVR Q9CQ54 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 Mus musculus CD1 0.012675772 1 LEVO MPFLDIQKKLGISLDRHFMFLSAEQPYKNAARCHAFEKEWIECAHGIGGTRAKKECKIEFDDFEECLLRYKTMRRMHDIK KQREKLMKEGKYTPPPHHSGREEPRP Q99LY9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 Mus musculus CD1 0.006965109 1 LEVO MTLFQLLREHWVHILVPAGFVFGCYLDRKDDEKLTAFRNKSMLFQRELRPNEEVTWK P0DN34 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial Mus musculus CD1 0.017463727 1 LEVO MAARLLSLYGRCLSAAGAMRGLPAARVRWESSRAVIAPSGVEKKRQREPTMQWQEDPEPEDENVYAKNPDFHGYDSDPVV DVWNMRAVFFFGFSIVLVFGTTFVAYVPDYRMQEWARREAERLVKYREVNGLPIMESNYFDPSKIQLPEDD O09111 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial Mus musculus CD1 0.021742196999999998 1 LEVO MAAMSLLQRASVSALTALSCRRAGPRLGVGSFLTRSFPKTVAPVRHSGDHGKRLFVVKPSLYYDARFLRLMKFYLMLTGI PVIIGITLVNIFIGEAELAEIPEGYIPEHWEYYKHPISRWIARNFYDGPEKNYEKTLAILQIESEKAELRLKEQEVRRLM RARGDGPWYQFPTPEKEFIDHSPKATPDN Q9CQH3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 Mus musculus CD1 0.015582121999999999 1 LEVO M(SAC)GYTPDEKLRLQQLRELRRRWLKDQELSPREPVLPPRRMWPLERFWDNFLRDGAVWKNMVFKAYRSSLFAVSHVL IPMWFVHYYVKYHMATKPYTIVSSKPRIFPGDTILETGEVIPPMRDFPDQHH Q3UIU2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial Mus musculus CD1 0.011982436999999999 1 LEVO MSALTRLVPFGRVGGRLLRGCRARAAGDSGVRHAGGGVHIQPRYREFPQLTRSQVIQGEFLSSLMWFWILWRFWHDSDAV LGHFSYPDPSQWTDEELGIPPDDED Q9CPU2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 Mus musculus CD1 0.011714239999999999 1 LEVO MAAGHGHEHGHEHGHGHGKMELPDYRQWKIEGTPLETVQKKLAARGLRDPWARNEAWRYMGGFAGNITFPSVILKGFKWG FAAFVVALGAEYFLDSQNGDKKHH Q9CQZ6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial Mus musculus CD1 0.021903828 1 LEVO MAAARAAALGVRWLQRTTRGVVPLEARRAFHMTKDMLPGSYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPMLPN RSQHERDPWYQWDHSELRMNWGEPIHWDLDMYIRNRVDTSPTPVSWDVMCKHLFGFVAFMVFMFWVGHVFPSYQPVGPKQ YPYNNLYLERGGDPTKEPEPVVHYDI Q9D6J5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 Mus musculus CD1 0.015105287 1 LEVO MSGSKYKPAPLATLPSTLDPAEYDVSPETRRAQVERLSIRARLKREYLLQYNDPKRVSHIEDPALIRWTYARSANIYPNF RPTPKNSLLGAVAGFGPLIFWYYVFKTDRDRKERLIQEGKLDRKFNISY Q9CQC7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 Mus musculus CD1 0.022020123 1 LEVO MAFCAPPAYLTHQQKVLRLYKRALRHLESWCIHRDKYRYFACLMRARFEEHKNEKDMMRATQLLREAEEEFWQNQHPQPY IFPDSPGGTSFERYECYKVPEWCLDYWHPSEKAMYPDYFSKREQWKKLRMESWDREVKQLQEETSPDGIMTEALPPARRE GDLPPLWWHIVTRPRERPT Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 Mus musculus CD1 0.016360804 1 LEVO MGAHLTRRYLWDASVEPDPEKIPSFPPDLGFPERKERVMVATQQEMMDAQLTLQQRDYCAHYLIRLLKCKRDSFPNFLAC KHEQHDWDYCEHLDYVKRMKEFERERRLLQRKKRRALKEARVAQGQGEGEVGPEVAL Q9CR61 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 Mus musculus CD1 0.021054832 1 LEVO MPDSWDKDVYPEPPSRTPAPSPQTSLPNPITYLTKAYDLVVDWPVTLVREFIERQHAKNRTYYYHRQYRRVPDITECKEG DVLCIYEAEMQWRRDFKVDQEIMNIIQERLKACQQREGENYQQNCAKELEQFTKVTKAYQDRYLDLGAYYSARKCLAKQK QRMLEERKAARQEAAA Q9DCS9 1,2-Distearoyl-sn-glycerophosphoethanolamine 0.000748065 33 3PE CARDIOLIPIN 0.0014640429999999997 16 CDL PROTOPORPHYRIN IX CONTAINING FE 0.000616487 4 HEM HEME C 0.0006185030000000001 2 HEC FE2/S2 (INORGANIC) CLUSTER 0.00017581999999999998 4 FES 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 0.0007901449999999999 12 PC1 COPPER (II) ION 6.354599999999999e-05 1 CU SODIUM ION 2.299e-05 1 NA HEME-A 0.000852837 2 HEA MAGNESIUM ION 2.4305e-05 2 MG DINUCLEAR COPPER ION 0.00012709199999999998 1 CUA ZINC ION 6.5409e-05 2 ZN TRISTEAROYLGLYCEROL 0.0008914799999999999 1 TGL IRON/SULFUR CLUSTER 0.00035163999999999996 6 SF4 FLAVIN MONONUCLEOTIDE 0.00045634399999999997 1 FMN POTASSIUM ION 3.9098e-05 1 K NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 0.000745421 1 NDP S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate 0.000568704 2 ZMP 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE 0.000507181 1 DGT singleParticle particle 0.3 7.7 50.0 NaCl sodium chloride 20.0 C8H18N2O4S HEPES 2.0 C10H16N2O8 EDTA Quantifoil R0.6/1 CARBON CONTINUOUS 1.0 ETHANE 100 277.15 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 50.0 2.7 1.0 0.5 2.0 2.5 81000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GATAN K3 BIOQUANTUM (6k x 4k) 1 9453 4.4 80.0 1 1758187
map obtained from previous processing of test dataset
 1 C1 3.3 FSC 0.143 CUT-OFF 103207 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD 4 emd_17990.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 281 206 247 0 0 0 281 206 247 297.86 218.35999 261.81998 90.0 90.0 90.0 X Y Z 0.0 0.15405951 0.001989356 0.006858134 1.06 1.06 1.06 0.016 AUTHOR composite map 6g2j PDB experimental model
CI
 7o3c PDB experimental model
CIII and CIV
 RIGID BODY FIT
initial fitting done in chimera