2024-11-27 REL PDBe PDBe PDBe 2023-06-30 2024-11-20 2024-11-20 2024-11-27 Spanish Ministry of Science, Innovation, and Universities PID2020-113287RB-I00 Spain HRV B14 virion proteins Gil-Cantero D Mata CP Mateu MG Caston JR cryo-EM, HRV B14, dsRNA virus, capsid, VIRUS Gil-Cantero D Mata CP Valiente L Rodriguez-Huete A Valbuena A Twarock R Stockley PG Mateu MG Caston JR Cryo-EM of human rhinovirus reveals capsid-RNA duplex interactions that provide insights into virus assembly and genome uncoating. Commun Biol UK 7 1501 1501 2024 39537894 doi:10.1038/s42003-024-07213-2 2399-3642 8pnf FULLOVERLAP rhinovirus B14 rhinovirus B14 0 1 2 3 4 5 rhinovirus B14 VIRION SPECIES false false Capsid protein VP1 rhinovirus B14 0.031975923999999996 1 rhinovirus B14 LEVO EEVIVEKTKQTVASISSGPKHTQKVPILTANETGATMPVLPSDSIETRTTYMHFNGSETDVECFLGRAACVHVTEIQNKD ATGIDNHREAKLFNDWKINLSSLVQLRKKLELFTYVRFDSEYTILATASQPDSANYSSNLVVQAMYVPPGAPNPKEWDDY TWQSASNPSVFFKVGDTSRFSVPYVGLASAYNCFYDGYSHDDAETQYGITVLNHMGSMAFRIVNEHDEHKTLVKIRVYHR AKHVEAWIPRAPRALPYTSIGRTNYPKNTEPVIKKRKGDIKSY P03303 Capsid protein VP2 rhinovirus B14 0.027903745999999997 1 rhinovirus B14 LEVO CGYSDRVQQITLGNSTITTQEAANAVVCYAEWPEYLPDVDASDVNKTSKPDTSVCRFYTLDSKTWTTGSKGWCWKLPDAL KDMGVFGQNMFFHSLGRSGYTVHVQCNATKFHSGCLLVVVIPEHQLASHEGGNVSVKYTFTHPGERGIDLSSANEVGGPV KDVLYNMNGTLLGNLLIFPHQFINLRTNNTATIVIPYINSVPIDSMTRHNNVSLMVIPIAPLTVPTGATPSLPITVTIAP MCTEFSGIRSKSIVPQ P03303 Capsid protein VP3 rhinovirus B14 0.026236754 1 rhinovirus B14 LEVO GLPTTTLPGSGQFLTTDDRQSPSALPNYEPTPRIHIPGKVHNLLEIIQVDTLIPMNNTHTKDEVNSYLIPLNANRQNEQV FGTNLFIGDGVFKTTLLGEIVQYYTHWSGSLRFSLMYTGPALSSAKLILAYTPPGARGPQDRREAMLGTHVVWDIGLQST IVMTIPWTSGVQFRYTDPDTYTSAGFLSCWYQTSLILPPETTGQVYLLSFISACPDFKLRLMKDTQTISQTVALTE P03303 Capsid protein VP4 rhinovirus B14 0.005093653 1 rhinovirus B14 LEVO SNQTFTYINYYKDAASTSSAGQSLSMDPSKFTEPVKDLMLKGAPALN P03303 RNA (5'-R(P*AP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') rhinovirus B14 0.004264403 1 AUUUUUUUUUUUUU singleParticle particle 7.4 10.0 (HOCH2)3CNH2 Tris 10.0 NaCl sodium chloride 1.5 MgCl2 Magensium Chloride 0.5 Nonidet P40 Quantifoil R2/2 COPPER/RHODIUM 300 CARBON HOLEY GLOW DISCHARGE ETHANE 95 FEI VITROBOT MARK IV TFS TALOS OTHER OTHER FIELD EMISSION GUN 200 2.7 1.2 3.2 73000.0 NITROGEN FEI FALCON III (4k x 4k) INTEGRATING 30.0 1 1NCQ 2.9 FSC 0.143 CUT-OFF 313305 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_17781.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 -150 -150 -150 300 300 300 411.0 411.0 411.0 90.0 90.0 90.0 X Y Z -0.1794691 0.28630298 0.0016878546 0.024693513 1.37 1.37 1.37 0.0744 AUTHOR 1ncq PDB experimental model emd_17781_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 -150 -150 -150 300 300 300 411.0 411.0 411.0 90.0 90.0 90.0 X Y Z -0.022029433 0.056502227 0.0016892687 0.0092083 1.37 1.37 1.37 AUTHOR emd_17781_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 -150 -150 -150 300 300 300 411.0 411.0 411.0 90.0 90.0 90.0 X Y Z -0.022285305 0.0567089 0.0016864407 0.00920896 1.37 1.37 1.37 AUTHOR