REL PDBe PDBe PDBe 2010-06-01 2010-06-11 2011-05-19 2011-05-19 Pyruvate carboxylase from S. aureus after addition of acetyl-CoA and AMP-PNP Lasso G Yu LPC Gil D Xiang S Tong L Valle M Pyruvate carboxylase, Biotin-dependent, Acetyl-CoA, Multifunctional, Pyruvate, Oxaloacetate, AMP-PNP, EC 6.4.1.1, Ligase Lasso G Yu LP Gil D Xiang S Tong L Valle M Cryo-EM analysis reveals new insights into the mechanism of action of pyruvate carboxylase. STRUCTURE 18 1300 1310 2010 20947019 doi:10.1016/j.str.2010.07.008 Pyruvate carboxylase from S. aureus after addition of acetyl-Coa and AMP-PNP Pyruvate carboxylase from S. aureus after addition of acetyl-Coa and AMP-PNP Homotetramer 1 0.52 Pyruvate carboxylase Staphylococcus aureus 0.52 Homotetramer true Escherichia coli BL21 Star pET28a singleParticle particle 0.1 7.5
20mM Tris-HCl, 2mM NaCl, 2mM DTT, 2mM acetyl-CoA, 2mM AMP-PNP
 NEGATIVE
Cryo-EM
Quantifoil R2/2, 100 holey carbon films, cu 200 mesh
 ETHANE 100 277 OTHER
Vitrification instrument: Vitrobot (FEI)
45 sec Blot for 1.5 seconds JEOL 2200FS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 2.0 1.254 6.349 50000.0 GATAN LIQUID NITROGEN 99 Omega KODAK SO-163 FILM ZEISS SCAI 2.82 49 11 Single tilt cryoholder
By defocus groups (Wiener filter)
 C2 OTHER 12.3 OTHER Spider 15268
Spider
 emd_1738.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 118 118 118 0 0 0 118 118 118 332.76 332.76 332.76 90 90 90 X Y Z -3.16715 9.587630000000001 0.0788165 1.0 2.82 2.82 2.82 3.44 AUTHOR Pyruvate carboxylase from S. aureus after addition of acetyl-CoA and AMP-PNP
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 3BG5 A FLEXIBLE FIT flex-em
PDBEntryID_givenInChain. Protocol: Initial rigid body followed by flexible fitting. The initial model was constructed based on 3BG5. Particular domains were modelled by homology modelling or manually fitted into the electron density. The model was finally refined using flex-em
REAL