REL PDBe PDBe PDBe 2010-04-27 2010-06-07 2010-06-07 2013-03-13 Capsid structure of the infectious Prochlorococcus Cyanophage P-SSP7 Liu X Zhang Q Murata K Baker ML Sullivan MB Fu C Dougherty M Schmid MF Osburne MS Chisholm SW Chiu W Marine Podovirus, T7-like virus, infects Prochlorococcus MED4 Liu X Zhang Q Murata K Baker ML Sullivan MB Fu C Dougherty MT Schmid MF Osburne MS Chisholm SW Chiu W Structural changes in a marine podovirus associated with release of its genome into Prochlorococcus. NAT.STRUCT.MOL.BIOL. 17 830 836 2010 20543830 doi:10.1038/nsmb.1823 EMD-1707 FULLOVERLAP EMD-1714 FULLOVERLAP EMD-1715 FULLOVERLAP 2xd8 FULLOVERLAP Cyanophage P-SSP7 Cyanophage P-SSP7 1 Prochlorococcus phage P-SSP7
The gp10 protein of P-SSP7 contains 375 amino acids.
Prochlorococcus phage P-SSP7 Prochlorococcus BACTERIA(EUBACTERIA) 655 7 VIRION STRAIN false false T7-LIKE CAPSID singleParticle particle 5 7.5
100 mM Tris-HCl , 100 mM MgSO4, and 30 mM NaCl
 NEGATIVE
No stain
200 mesh copper grid
 ETHANE 30 101 OTHER
Vitrification instrument: FEI Vitrobot
Blot for 2 seconds 2 times before plunging JEOL 3200FSC SPOT SCAN BRIGHT FIELD FIELD EMISSION GUN 300 4.1 0.6 3.0 60000.0 JEOL 3200FSC CRYOHOLDER 4.5 102 101 Objective lens astigmatism was corrected at 400,000 times magnification JEOL 15.0 20.0
MDS
2007-08-31 KODAK SO-163 FILM NIKON SUPER COOLSCAN 9000 6.35 1059 20
The cryoEM images were recorded on Kodak SO163 films. The films were developed in full strength D19 Kodak developer for 12 minutes at 20 degree and fixed for 10 minutes in Kodak fixer. The films were digitized at 6.35 microns per pixel using a Nikon Super CoolScan 9000 ED scanner (Nikon Corp., Japan).
8. Side entry
The particle were selected by the consistency criterion of MPSA
Each Micrograph
 I OTHER 4.6 FSC 0.5 CUT-OFF MPSA
The map was directly built from raw particles with icosahedral symmetry enforced.
36000
EMAN: Z along 5-fold and Y along 2-fold axis.
 emd_1713.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 576 576 576 -288 -288 -288 576 576 576 673.92 673.92 673.92 90 90 90 X Y Z -8.225070000000001 2.83289 0.0294803 0.261701 1.17 1.17 1.17 1.0 AUTHOR Icosahedral capsid structure of cyanophage P-SSP7
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 1IJG REAL 2JES REAL