2026-09-02 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY STRUCTURE_SUMMARY chem_comp_atom chem_comp_bond em_3d_fitting_list em_admin pdbx_entry_details pdbx_modification_feature pdbx_validate_close_contact struct_conn _em_3d_fitting_list.initial_refinement_model_id _em_admin.last_update _pdbx_entry_details.has_protein_modification REFINEMENT_DESCRIPTION em_3d_fitting_list em_admin _em_3d_fitting_list.initial_refinement_model_id _em_admin.last_update REMEDIATION REPOSITORY Metalloprotein remediation STRUCTURE_SUMMARY em_admin pdbx_modification_feature pdbx_nonpoly_atom_coordination pdbx_nonpoly_atom_coordination_sphere pdbx_nonpoly_atom_coordination_sphere_order pdbx_validate_close_contact struct_conn _em_admin.last_update EXPERIMENTAL_SUMMARY em_admin _em_admin.last_update PDBe PDBe 2023-03-30 2023-08-09 2023-08-09 2026-09-02 Medical Research Council (MRC, United Kingdom) MC_UU_00015/2 United Kingdom Medical Research Council (MRC, United Kingdom) MC_UU_00028/1 United Kingdom Mitochondrial complex I from Mus musculus in the active state bound with piericidin A Grba DN Chung I Bridges HR Agip ANA Hirst J Mitochondrial complex I, Respiratory complex I, NADH:ubiquinone oxidoreductase, OXIDOREDUCTASE Grba DN Chung I Bridges HR Agip AA Hirst J Investigation of hydrated channels and proton pathways in a high-resolution cryo-EM structure of mammalian complex I. Sci Adv US 9 eadi1359 eadi1359 2023 37531432 doi:10.1126/sciadv.adi1359 2375-2548 8olt FULLOVERLAP PDB 6ZTQ re-refinement EMDB EMD-16962 associated EM volume
Mitochondrial complex I from Mus musculus in the active state bound with piericidin A
 Mitochondrial respiratory complex I Mitochondrial respiratory complex I 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 41 42 43 44
Native purification of mitochondrial complex I from mouse hearts
Mus musculus Heart 1 NADH-ubiquinone oxidoreductase chain 3 Mus musculus 0.013251784999999999 1 LEVO (FME)NLYTVIFINILLSLTLILVAFWLPQMNLYSEKANPYECGFDPTSSARLPFSMKFFLVAITFLLFDLEIALLLPLP WAIQTIKTSTMMIMAFILVTILSLGLAYEWTQKGLEWTE P03899 7.1.1.2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial Mus musculus 0.024715912 1 LEVO MAALAAPGLLSVRILGLRTAQVQLRRVHQSVATEGPSPSPSPSLSSTQSAVSKAGAGAVVPKLSHLPRSRAEYVVTKLDD LINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVAGTLTNKMAPALRKVYDQMPEPRYVVS MGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIKREQKLKIWYRR Q9DC70 7.1.1.2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial Mus musculus 0.030191307 1 LEVO MAAAAARVWCRGLLGAASVGRGAGRPSVLWQHVRRESAAADKRPTVRPRSDVTHKQLSAFGEYVAEILPKYVQQVQVSCL DELEICIHPDGVIPTLTFLRDHTNAQFKSLADLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYADELTPIDSIVSVHI AANWYEREVWDMFGVFFFNHPDLRRILTDYGFEGHPFRKDFPLTGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEA FPAYRQPPESLKLEAGDKKPETK Q9DCT2 7.1.1.2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial Mus musculus 0.052720602 1 LEVO MAALRALRCLRGVGAPVLRPGSGIRLPSQPSRGARQWQPDIEWAEQFSGAVMYPSKETAHWKPPPWNDVDILKEKAVTNM TLNFGPQHPAAHGVLRLVLELSGEMVRKCDPHIGLLH(2MR)GTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSIAVE KLLNIQPPPRAQWIRVLFGEITRILNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYERVSGARMHAAYIRPGGVHQDL PLGLLDDIYEFSKNFSLRIDEVEEMLTNNRIWRNRTVDIGVVTAEDALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEF DVPIGSRGDCYDRYLCRVEEMRQSLRIIEQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGAT YTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEIDR Q91WD5 7.1.1.2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Mus musculus 0.027318336 1 LEVO MFSLALRARATGLAAQWGRHARNLHKTAVHNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHQAAAVLP VLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRDSDSILETLQRKLGIKVG ETTPDKLFTLIEVECLGACVNAPMVQINDNYYEDLTPKDIEEIIDELKAGKVPKPGPRSGRFCCEPAGGLTSLTEPPKGP GFGVQAGL Q9D6J6 7.1.1.2 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Mus musculus 0.050904152 1 LEVO MLAARHFLGGLVPVRVSVRFSSGTTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGALRRGDWYKTKEILLKGPDWILGEM KTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGGRAMGARAAYIYIRG EFYNEASNLQVAIREAYEAGLIGKNACGSDYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPT TVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPG GSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFV KGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEDRMQRFAQQHRAWQAAS Q91YT0 7.1.1.2 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial Mus musculus 0.07986668799999999 1 LEVO MLRIPIKRALIGLSNSPKGYVRTTGTAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLV EIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMMFGSDRSRFLEGKRAV EDKNIGPLVKTIMTRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNVIDICPVGALTSKPYAFTA RPWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFAYDGLKRQRLTEPMVRNEKGLLTYTSWE DALSRVAGMLQNFEGNAVAAIAGGLVDAEALVALKDLLNKVDSDNLCTEEIFPTEGAGTDLRSNYLLNTTIAGVEEADVV LLVGTNPRFEAPLFNARIRKSWLHNDLKVALIGSPVDLTYRYDHLGDSPKILQDIASGRHSFCEVLKDAKKPMVVLGSSA LQRDDGAAILVAVSNMVQKIRVTTGVAAEWKVMNILHRIASQVAALDLGYKPGVEAIRKNPPKMLFLLGADGGCITRQDL PKDCFIVYQGHHGDVGAPMADVILPGAAYTEKSATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGITLPYDTLD QVRNRLEEVSPNLVRYDDIEETNYFQQASELAKLVNQEVLADPLVPPQLTIKDFYMTDSISRASQTMAKCVKAVTEGAQA VEEPSIC Q91VD9 7.1.1.2 NADH-ubiquinone oxidoreductase chain 1 Mus musculus 0.036105027 1 LEVO (FME)FFINILTLLVPILIAMAFLTLVERKILGYMQLRKGPNIVGPYGILQPFADAMKLFMKEPMRPLTTSMSLFIIAPT LSLTLALSLWVPLPMPHPLINLNLGILFILATSSLSVYSILWSGWASNSKYSLFGALRAVAQTISYEVTMAIILLSVLLM NGSYSLQTLITTQEHMWLLLPAWPMAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYTNIILMNA LTTIIFLGPLYYINLPELYSTNFMMEALLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIFTAGVPP YM P03888 7.1.1.2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial Mus musculus 0.024068355 1 LEVO MYRLSSSMLPRALAQAMRTGHLNGQSLHSSAVAATYKYVNKKEQESEVDMKSATDNAARILMWTELIRGLGMTLSYLFRE PATINYPFEKGPLSPRFRGEHALRRYPSGEERCIACKLCEAICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQE ACPVDAIVEGPNFEFSTETHEELLYNKEKLLNNGDKWEAEIAANIQADYLYR Q8K3J1 7.1.1.2 NADH-ubiquinone oxidoreductase chain 6 Mus musculus 0.0186561 1 LEVO (FME)NNYIFVLSSLFLVGCLGLALKPSPIYGGLGLIVSGFVGCLMVLGFGGSFLGLMVFLIYLGGMLVVFGYTTAMATE EYPETWGSNWLILGFLVLGVIMEVFLICVLNYYDEVGVINLDGLGDWLMYEVDDVGVMLEGGIGVAAMYSCATWMMVVAG WSLFAGIFIIIEITRD P03925 7.1.1.2 NADH-ubiquinone oxidoreductase chain 4L Mus musculus 0.010637629000000001 1 LEVO (FME)PSTFFNLTMAFSLSLLGTLMFRSHLMSTLLCLEGMVLSLFIMTSVTSLNSNSMSSMPIPITILVFAACEAAVGLA LLVKVSNTYGTDYVQNLNLLQC P03903 7.1.1.2 NADH-ubiquinone oxidoreductase chain 5 Mus musculus 0.06854729700000001 1 LEVO (FME)NIFTTSILLIFILLLSPILISMSNLIKHINFPLYTTTSIKFSFIISLLPLLMFFHNNMEYMITTWHWVTMNSMEL KMSFKTDFFSILFTSVALFVTWSIMQFSSWYMHSDPNINRFIKYLTLFLITMLILTSANNMFQLFIGWEGVGIMSFLLIG WWYGRTDANTAALQAILYNRIGDIGFILAMVWFSLNMNSWELQQIMFSNNNDNLIPLMGLLIAATGKSAQFGLHPWLPSA MEGPTPVSALLHSSTMVVAGIFLLVRFHPLTTNNNFILTTMLCLGALTTLFTAICALTQNDIKKIIAFSTSSQLGLMMVT LGMNQPHLAFLHICTHAFFKAMLFMCSGSIIHSLADEQDIRKMGNITKIMPFTSSCLVIGSLALTGMPFLTGFYSKDLII EAINTCNTNAWALLITLIATSMTAMYSMRIIYFVTMTKPRFPPLISINENDPDLMNPIKRLAFGSIFAGFVISYNIPPTS IPVLTMPWFLKTTALIISVLGFLIALELNNLTMKLSMNKANPYSSFSTLLGFFPSIIHRITPMKSLNLSLKTSLTLLDLI WLEKTIPKSTSTLHTNMTTLTTNQKGLIKLYFMSFLINIILIIILYSINLE P03921 7.1.1.2 NADH-ubiquinone oxidoreductase chain 4 Mus musculus 0.051943547 1 LEVO (FME)LKIILPSLMLLPLTWLSSPKKTWTNVTSYSFLISLTSLTLLWQTDENYKNFSNMFSSDPLSTPLIILTAWLLPLM LMASQNHLKKDNNVLQKLYISMLISLQILLIMTFSATELIMFYILFEATLIPTLIIITRWGNQTERLNAGIYFLFYTLIG SIPLLIALILIQNHVGTLNLMILSFTTHTLDASWSNNLLWLACMMAFLIKMPLYGVHLWLPKAHVEAPIAGSMILAAILL KLGSYGMIRISIILDPLTKYMAYPFILLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIASIMIQTPWSFMGATMLM IAHGLTSSLLFCLANSNYERIHSRTMIMARGLQMVFPLMATWWLMASLANLALPPSINLMGELFITMSLFSWSNFTIILM GINIIITGMYSMYMIITTQRGKLTNHMINLQPSHTRELTLMALHMIPLILLTTSPKLITGLTM P03911 7.1.1.2 NADH-ubiquinone oxidoreductase chain 2 Mus musculus 0.03880023 1 LEVO (FME)NPITLAIIYFTIFLGPVITMSSTNLMLMWVGLEFSLLAIIPMLINKKNPRSTEAATKYFVTQATASMIILLAIVL NYKQLGTWMFQQQTNGLILNMTLMALSMKLGLAPFHFWLPEVTQGIPLHMGLILLTWQKIAPLSILIQIYPLLNSTIILM LAITSIFMGAWGGLNQTQMRKIMAYSSIAHMGWMLAILPYNPSLTLLNLMIYIILTAPMFMALMLNNSMTINSISLLWNK TPAMLTMISLMLLSLGGLPPLTGFLPKWIIITELMKNNCLIMATLMAMMALLNLFFYTRLIYSTSLTMFPTNNNSKMMTH QTKTKPNLMFSTLAIMSTMTLPLAPQLIT P03893 7.1.1.2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial Mus musculus 0.040657374999999996 1 LEVO MALRLLRLVPASAPARGLAAGAQRVGRIHTSVHCKLRYGLLAAILGDKTTKKLHEYSRVITVDGNICSGKNKLAKEIAQQ LGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEKFYDDPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLE RSIYSDFVFLEAMYNQGYIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHEMKVTSAYLQDIENA YKKTFLPKMSEMCEVLVYDSWEAEDPTKVVEDIEYLKYNKGPWLKQDDWTFHYLRMLVQDKTEVLNYTTIPVYLPEITIG AHQGSRIYNSFRELPGRKYAPGYNAEVGDKWIWLK Q99LC3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial Mus musculus 0.042588129 1 LEVO MAAAVRFRVVRALPMSRPAITAAATSVFCGSSHRQLHHAVIPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQV IIPYRCDVYDIMHLRLMGDLGQLTFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAG VERFIHVSHLNASMKSSSKSLRSKAVGEKEVRSVFPEAIIIRPSDIFGREDRFLNHFANYRWFLAVPLVSLGFKTVKQPV YVADVSKGIVNATKDPDAVGKTFAFTGPNRYLLFHLVKYIFGMTHRTFIPYPLPLFVYSWIGKLFGLSPFEPWTTKDKVE RIHISDVMPTDLPGLEDLGVQPTPLELKSIEVLRRHRTYRWLSSEIEETKPAKTVNY Q9DC69 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial Mus musculus 0.019814725 1 LEVO MAAVSISVSLRQAMLGRRAMATAAVSVCRVPSRLLSTSTWKLADNQTRDTQLITVDEKLDITTLTGVPEEHIKTRKVRIF VPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTADPLSNMVLTFSAKEDAIAFAEKNGWSYDVEEKKVPKPKSKSY GANFSWNKRTRVSTK Q9CXZ1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial Mus musculus 0.013041827999999998 1 LEVO MAAVLTFRRLLTLPRAARGFGVQVSPSGEKITHTGQVYDEKDYRRVRFVDRQKEVNENFAIDLIAQQPVNEVEHRIIACD GGGGALGHPKVYINLDKETKTGTCGYCGLQFKQHHH P52503 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 Mus musculus 0.010932675 1 LEVO MAAAAASRAVGAKLGLREIRVHLCQRSPGSQGVRDFIVQRYVELKKAHPNLPILIRECSEVQPKLWARYAFGQEKTVSLN NLSADEVTRAMQNVLSGKA Q9CQ75 Acyl carrier protein, mitochondrial Mus musculus 0.017390289 2 LEVO MASRVLCACVRRLPAAFAPLPRLPTLALARPLSTTLCPEGIRRRPGALQSALALAQVPGTVTHLCRQYSDAPPLTLDGIK DRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADKKDVYE Q9CR21 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 Mus musculus 0.013380719 1 LEVO MAGLLKKTTGLVGLAVCDTPHERLTILYTKTLDILKHFPKHAAYRKYTEQITNEKLDMVKAEPDVKKLEALLQGGEVEEV ILQAEKELSLARKMLKWKPWEPLVEEPPANQWKWPI Q9CPP6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 Mus musculus 0.015311858 1 LEVO MAAAATGLRQAAAAAASTSVKPIFSRDLNEAKRRVRELYRAWYREVPNTVHLMQLDITVKQGRDKVREMFMKNAHVTDPR VVDLLVIKGKMELQETIKVWKQRTHVMRFFHETETPRPKDFLSKFYMGHDP Q9CQZ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 Mus musculus 0.020025127 1 LEVO MPGIVELPTLEELKVEEVKVSSAVLKAAAHHYGAQCDKTNKEFMLCRWEEKDPRRCLKEGKLVNGCALNFFRQIKSHCAE PFTEYWTCLDYSNMQLFRHCRQQQAKFDQCVLDKLGWVRPDLGQLSKVTKVKTDRPLPENPYHSRARPEPNPVIEGDLKP AKHGTRFFFWTV Q9DCJ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 Mus musculus 0.015130415999999999 1 LEVO MAMVKRFFESYHEVPDGTQCHRKTYITTALGGICGIIGSAYSVSLNPADSTLEAVARVGRYTFTAAAIGAMFGLTTCVSA QVREKPDDPLNYFIGGCAGGLTLGARTHSYGTAAMGCVYMGTAAALFKIGKLEGWELFPTPKV G5E814 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 Mus musculus 0.016881588 1 LEVO MAASKVKQDMPPPGGYGPIDYKRNLPRRGLSGYSMFAVGIGALIFGYWRMMRWNQERRRLLIEDLEARIALMPLFQAEKD RRTLQILRENLEEEAIIMKDVPNWKVGESVFHTTRWVPPLIGEMYGLRTKEEMSNANFGFTWYT Q9ERS2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 Mus musculus 0.008149524 1 LEVO MWFEILPGLAIMGVCLVIPGVSTAYIHKFTNGGKEKRVARVQYQWYLMERDRRISGVNRYYVSKGLENID O35683 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 Mus musculus 0.009338866999999999 1 LEVO MAGRISAFLKNAWAKEPVLVVSFSVWGLAIIMPMISPYTKYASMINKATPYNYPVPVRDDGNMPDVPSHPQDPLGPSLDW LKNL Q9CQ91 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial Mus musculus 0.008636023 1 LEVO MAPSVVLRSFSRLLAPARLPSCSSTRSKFYVREPVNAKPNWLAVGLSVGASVFMWIYLIQTHNEDVLEYKRRNGLE Q9CQY9 NADH dehydrogenase [ubiquinone] 1 subunit C2 Mus musculus 0.014185691999999998 1 LEVO MMNGRPGHEPLKFLPDEARSLPPPKLNDPRLVYMGLLGYCTGLMDNMLRMRPVMRAGLHRQLLFVTSFVFAGYFYLKRQN YLYAVKDHDMFGYIKLHPEDFPEKEKKTYAEILEPFHPVR Q9CQ54 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 Mus musculus 0.012675772 1 LEVO MPFLDIQKKLGISLDRHFMFLSAEQPYKNAARCHAFEKEWIECAHGIGGTRAKKECKIEFDDFEECLLRYKTMRRMHDIK KQREKLMKEGKYTPPPHHSGREEPRP Q99LY9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 Mus musculus 0.006965109 1 LEVO MTLFQLLREHWVHILVPAGFVFGCYLDRKDDEKLTAFRNKSMLFQRELRPNEEVTWK P0DN34 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial Mus musculus 0.017463727 1 LEVO MAARLLSLYGRCLSAAGAMRGLPAARVRWESSRAVIAPSGVEKKRQREPTMQWQEDPEPEDENVYAKNPDFHGYDSDPVV DVWNMRAVFFFGFSIVLVFGTTFVAYVPDYRMQEWARREAERLVKYREVNGLPIMESNYFDPSKIQLPEDD O09111 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial Mus musculus 0.021742196999999998 1 LEVO MAAMSLLQRASVSALTALSCRRAGPRLGVGSFLTRSFPKTVAPVRHSGDHGKRLFVVKPSLYYDARFLRLMKFYLMLTGI PVIIGITLVNIFIGEAELAEIPEGYIPEHWEYYKHPISRWIARNFYDGPEKNYEKTLAILQIESEKAELRLKEQEVRRLM RARGDGPWYQFPTPEKEFIDHSPKATPDN Q9CQH3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 Mus musculus 0.015582121999999999 1 LEVO M(SAC)GYTPDEKLRLQQLRELRRRWLKDQELSPREPVLPPRRMWPLERFWDNFLRDGAVWKNMVFKAYRSSLFAVSHVL IPMWFVHYYVKYHMATKPYTIVSSKPRIFPGDTILETGEVIPPMRDFPDQHH Q3UIU2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial Mus musculus 0.011982436999999999 1 LEVO MSALTRLVPFGRVGGRLLRGCRARAAGDSGVRHAGGGVHIQPRYREFPQLTRSQVIQGEFLSSLMWFWILWRFWHDSDAV LGHFSYPDPSQWTDEELGIPPDDED Q9CPU2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 Mus musculus 0.011714239999999999 1 LEVO MAAGHGHEHGHEHGHGHGKMELPDYRQWKIEGTPLETVQKKLAARGLRDPWARNEAWRYMGGFAGNITFPSVILKGFKWG FAAFVVALGAEYFLDSQNGDKKHH Q9CQZ6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial Mus musculus 0.021903828 1 LEVO MAAARAAALGVRWLQRTTRGVVPLEARRAFHMTKDMLPGSYPRTPEERAAAAKKYNMRVEDYEPYPDDGMGYGDYPMLPN RSQHERDPWYQWDHSELRMNWGEPIHWDLDMYIRNRVDTSPTPVSWDVMCKHLFGFVAFMVFMFWVGHVFPSYQPVGPKQ YPYNNLYLERGGDPTKEPEPVVHYDI Q9D6J5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 Mus musculus 0.015105287 1 LEVO MSGSKYKPAPLATLPSTLDPAEYDVSPETRRAQVERLSIRARLKREYLLQYNDPKRVSHIEDPALIRWTYARSANIYPNF RPTPKNSLLGAVAGFGPLIFWYYVFKTDRDRKERLIQEGKLDRKFNISY Q9CQC7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 Mus musculus 0.022020123 1 LEVO MAFCAPPAYLTHQQKVLRLYKRALRHLESWCIHRDKYRYFACLMRARFEEHKNEKDMMRATQLLREAEEEFWQNQHPQPY IFPDSPGGTSFERYECYKVPEWCLDYWHPSEKAMYPDYFSKREQWKKLRMESWDREVKQLQEETSPDGIMTEALPPARRE GDLPPLWWHIVTRPRERPT Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7, METHYLGLYOXAL BIS-(GUANYLHYDRAZONE), NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 Mus musculus 0.016360804 1 LEVO MGAHLTRRYLWDASVEPDPEKIPSFPPDLGFPERKERVMVATQQEMMDAQLTLQQRDYCAHYLIRLLKCKRDSFPNFLAC KHEQHDWDYCEHLDYVKRMKEFERERRLLQRKKRRALKEARVAQGQGEGEVGPEVAL 7.1.1.2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 Mus musculus 0.021054832 1 LEVO MPDSWDKDVYPEPPSRTPAPSPQTSLPNPITYLTKAYDLVVDWPVTLVREFIERQHAKNRTYYYHRQYRRVPDITECKEG DVLCIYEAEMQWRRDFKVDQEIMNIIQERLKACQQREGENYQQNCAKELEQFTKVTKAYQDRYLDLGAYYSARKCLAKQK QRMLEERKAARQEAAA Q9DCS9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 Mus musculus 0.017154453 1 LEVO (AME)ELVEVLKRGVQQVTGHGGLRGLLRVFFRANDIRIGTLVGEDKYGNKYYEDNKQFFGRHRWVIYTTEMNGKNTFWD VDGSMVPPEWHRWLHCMTDDPPTTNPPTARKFIWTNHKFNVSATPEQYVPYSTTRKKIHEWVPPSTPYK Q7TMF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 Mus musculus 0.012637629000000001 1 LEVO M(AYA)SATRVIQKLRNWASGQDLQAKLQLRYQEIAKRTQPPPKLPVGPSHKLSNNYYCTRDGRREVVPPSIIMSSQKAL VSGKAAESSAMAATEKKAVTPAPPMKRWELSKDQPYL Q9Z1P6 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial Mus musculus 0.011833504 1 LEVO MAVSLLLRGGRIRALKAVLLEARVFPGELVSVVRLSTESEKSAKEKELHPKTQSVLKEPEPTDTTTYKNLQHHDYNTYTF LDLNLDLSKFRLPQPSSGRESPRH Q8BK30 DODECYL-BETA-D-MALTOSIDE 0.000510615 16 LMT 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 0.0007901449999999999 3 PC1 IRON/SULFUR CLUSTER 0.00035163999999999996 6 SF4 Piericidin A 0.00041556599999999997 1 HQH FE2/S2 (INORGANIC) CLUSTER 0.00017581999999999998 2 FES FLAVIN MONONUCLEOTIDE 0.00045634399999999997 1 FMN SODIUM ION 2.299e-05 1 NA CARDIOLIPIN 0.0014640429999999997 5 CDL 1,2-Distearoyl-sn-glycerophosphoethanolamine 0.000748065 14 3PE MAGNESIUM ION 2.4305e-05 1 MG GUANOSINE-5'-TRIPHOSPHATE 0.0005231799999999999 1 GTP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 0.000745421 1 NDP ZINC ION 6.5409e-05 1 ZN ~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3~{S})-3-oxidanyltetradecanethioate 0.000584703 2 EHZ MYRISTIC ACID 0.000228371 1 MYR water 1.8015e-05 280 HOH singleParticle particle 4.1 7.14 20.0 Tris-HCl Trizma base 150.0 NaCl Sodium chloride 0.05 DDM n-dodecyl-beta-D-maltoside
PH corrected at room temperature
 UltrAuFoil GOLD 300 GOLD HOLEY GLOW DISCHARGE AIR
The grid was treated for 48 hours in an anaerobic glovebox in ethanol containing 5mM 11-mercaptoundecylhexaethyleneglycol, washed three times in ethanol and air dried prior to use. Note the hole sizes are R0.6/1.
 ETHANE 100 277 FEI VITROBOT MARK IV
blot for 10 to 12 seconds before plunging.
FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 2.2 3.4 47600.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GIF Quantum LS 20 GATAN K2 SUMMIT (4k x 4k) COUNTING 3838 3710 1-21 1 1200 10.0 50.0
Images were collected over 25 frames per exposure
 FEI FALCON III (4k x 4k) COUNTING 1 1454 71.5 46.0
Images were collected over 40 frames per exposure
 1
The final reconstruction is combined from two branches with one coming from a K2 detector and the other from a Falcon III.
63952
This is from an initial of 36,759 and 27,193 particles from the Falcon III and K2 detectors, respectively.
 RELION 3.1 CTFFIND 4.1.1 PHASE FLIPPING AND AMPLITUDE CORRECTION EMD-11424 2.84 FSC 0.143 CUT-OFF RELION 3.1
This is the combined particles from the two branches of data collected on the two different detectors
41670 PROJECTION MATCHING RELION 3.1 MAXIMUM LIKELIHOOD RELION 3.1 RELION 3.1 emd_16962.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 504 504 504 0 0 0 504 504 504 535.5 535.5 535.5 90.0 90.0 90.0 X Y Z -0.19470023 0.38562217 -0.000073707175 0.015012859 1.0625 1.0625 1.0625 0.06 AUTHOR Full map of mouse complex I inhibited by Piericidin A, post-processed with RELION 6ZR2 PDB experimental model REAL emd_16962_msk_1.map emd_16962_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 504 504 504 0 0 0 504 504 504 535.5 535.5 535.5 90.0 90.0 90.0 X Y Z -0.05267662 0.22675899 -0.00007564613 0.0053441725 1.0625 1.0625 1.0625 AUTHOR Half map 2 emd_16962_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 504 504 504 0 0 0 504 504 504 535.5 535.5 535.5 90.0 90.0 90.0 X Y Z -0.046737287 0.2231832 -0.00007176822 0.00535083 1.0625 1.0625 1.0625 AUTHOR Half map 1