2024-03-13 REL PDBe PDBe PDBe 2023-03-26 2024-03-13 2024-03-13 2024-03-13 Cancer Research UK United Kingdom Bipartite interaction of TOPBP1 with the GINS complex Day M Oliver AW Pearl LH Scaffold, Replisome, Recruitment, REPLICATION Day M Tetik B Parlak M Almeida-Hernandez Y Raschle M Kaschani F Siegert H Marko A Sanchez-Garcia E Kaiser M Barker IA Pearl LH Oliver AW Boos D TopBP1 utilises a bipartite GINS binding mode to support genome replication. Nat Commun UK 15 1797 1797 2024 38413589 doi:10.1038/s41467-024-45946-0 2041-1723 8ok2 FULLOVERLAP GINS complex bound to TOPBP1 GINS complex bound to TOPBP1 0 1 2 3 4 5 Homo sapiens DNA replication complex GINS protein PSF1 Homo sapiens 0.017772437999999998 1 Spodoptera frugiperda LEVO MFCEKAMELIRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSGGRSDLIPTIKFRHCSLLRNRRCTVAYL YDRLLRIRALRWEYGSILPNALRFHMAAEEMEWFNNYKRSLATYMRSLGGDEGLDITQDMKPPKSLYIEVR Q14691 DNA replication complex GINS protein PSF2 Homo sapiens 0.021453713 1 Spodoptera frugiperda LEVO MDAAEVEFLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPEWMDVEKLEKMRDHERK EETFTPMPSPYYMELTKLLLNHASDNIPKADEIRTLVKDMWDTRIAKLRVSADSFVRQQEAHAKLDNLTLMEINTSGTFL TQALNHMYKLRTNLQPLESTQSQDF Q9Y248 DNA replication complex GINS protein PSF3 Homo sapiens 0.024562610999999998 1 Spodoptera frugiperda LEVO MSEAYFRVESGALGPEENFLSLDDILMSHEKLPVRTETAMPRLGAFFLERSAGAETDNAVPQGSKLELPLWLAKGLFDNK RRILSVELPKIYQEGWRTVFSADPNVVDLHKMGPHFYGFGSQLLHFDSPENADISQSLLQTFIGRFRRIMDSSQNAYNED TSALVARLDEMERGLFQTGQKGLNDFQCWEKGQASQITASNLVQNYKKRKFTDMED Q9BRX5 DNA replication complex GINS protein SLD5 Homo sapiens 0.030831813999999996 1 Spodoptera frugiperda LEVO MHHHHHHGRMDYKDDDDKADYKDDDDKADYKDDDDKGRPMTEEVDFLGQDSDGGSEEVVLTPAELIERLEQAWMNEKFAP ELLESKPEIVECVMEQLEHMEENLRRAKREDLKVSIHQMEMERIRYVLSSYLRCRLMKIEKFFPHVLEKEKTRPEGEPSS LSPEELAFAREFMANTESYLKNVALKHMPPNLQKVDLFRAVPKPDLDSYVFLRVRERQENILVEPDTDEQRDYVIDLEKG SQHLIRYKTIAPLVASGAVQLI Q9BRT9 Topoisomerase (DNA) II binding protein 1 Homo sapiens 0.052397535 1 Spodoptera frugiperda LEVO MGSHHHHHHGSLEVLFQGPHMASNSLNSKLEPTLENLENLDVSAFQAPEDLLDGCRIYLCGFSGRKLDKLRRLINSGGGV RFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPHVVGAKWLLECFSKGYMLSEEPYIHANYQPVEIPVSHQPESKAALLKK KNSSFSKKDFAPSEKHEQADEDLLSQYENGSSTVVEAKTSEARPFNDSTHAEPLNDSTHISLQEENQSSVSHCVPDVSTI TEEGLFSQKSFLVLGFSNENESNIANIIKENAGKIMSLLSRTVADYAVVPLLGCEVEATVGEVVTNTWLVTCIDYQTLFD PKSNPLFTPVPVMTGMTPLEDCVISFSQCAGAEKESLTFLANLLGASVQEYFVRKSNAKKGMFASTHLILKERGGSKYEA AKKWNLPAVTIAWLLETARTGKRADESHFLIENSTKEERSLETEITNGINLNSDTAEHPRRAWSHPQFEK A7E2X7 singleParticle particle 7.5 ETHANE-PROPANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 1.2 2.2 FEI FALCON IV (4k x 4k) 39.69290657 1 4.1 FSC 0.143 CUT-OFF 154278 PROJECTION MATCHING MAXIMUM LIKELIHOOD emd_16916.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 207.2 207.2 207.2 90.0 90.0 90.0 Z Y X -0.021244345 0.03759489 0.00003447198 0.0012448505 0.74 0.74 0.74 0.003 AUTHOR emd_16916_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 238.0 238.0 238.0 90.0 90.0 90.0 X Y Z -0.0063302475 0.021703871 0.000016642309 0.0009847764 0.85 0.85 0.85 AUTHOR emd_16916_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 256 256 256 0 0 0 256 256 256 217.6 217.6 217.6 90.0 90.0 90.0 X Y Z -0.0078516435 0.026011799 0.00006672053 0.0010765358 0.85 0.85 0.85 AUTHOR emd_16916_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 207.2 207.2 207.2 90.0 90.0 90.0 X Y Z -0.01062616 0.0235425 0.00005283934 0.0010912269 0.74 0.74 0.74 AUTHOR emd_16916_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 280 280 280 0 0 0 280 280 280 207.2 207.2 207.2 90.0 90.0 90.0 X Y Z -0.009746505 0.02459974 0.0000514908 0.0010935974 0.74 0.74 0.74 AUTHOR