2024-01-31 REL PDBe PDBe PDBe 2023-01-24 2023-12-20 2023-12-20 2024-01-31 Medical Research Council (MRC, United Kingdom) MC_U105663141 United Kingdom Medical Research Council (MRC, United Kingdom) MC_UU_00015/2 United Kingdom Medical Research Council (MRC, United Kingdom) MC_UU_00028/1 United Kingdom Cryo-EM structure of the ACADVL dimer from Mus musculus. Yin Z Bridges HR Agip ANA Hirst J NADH ubiquinone oxidoreductase, Complex I, OXIDOREDUCTASE Yin Z Agip AA Bridges HR Hirst J Structural insights into respiratory complex I deficiency and assembly from the mitochondrial disease-related ndufs4 -/- mouse. Embo J. UK 43 225 249 2024 38177503 doi:10.1038/s44318-023-00001-4 1460-2075 0897 EMJODG 8ca1 FULLOVERLAP Very long-chain specific acyl-CoA dehydrogenase, mitochondrial Very long-chain specific acyl-CoA dehydrogenase, mitochondrial 0 1 Mus musculus Very long-chain specific acyl-CoA dehydrogenase, mitochondrial Mus musculus heart 0.07095937499999999 2 LEVO MQSARMTPSVGRQLLRLGARSSRSTTVLQGQPRPISAQRLYAREATQAVLDKPETLSSDASTREKPARAESKSFAVGMFK GQLTIDQVFPYPSVLSEEQAQFLKELVGPVARFFEEVNDPAKNDALEKVEDDTLQGLKELGAFGLQVPSELGGLGLSNTQ YARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQREKYLPRVASGQALAAFCLTEPSSGSDVASIRSSAIPSPCGK YYTLNGSKIWISNGGLADIFTVFAKTPIKDAATGAVKEKITAFVVERSFGGVTHGLPEKKMGIKASNTSEVYFDGVKVPS ENVLGEVGDGFKVAVNILNNGRFGMAATLAGTMKSLIAKAVDHATNRTQFGDKIHNFGVIQEKLARMAILQYVTESMAYM LSANMDQGFKDFQIEAAISKIFCSEAAWKVADECIQIMGGMGFMKEPGVERVLRDIRIFRIFEGANDILRLFVALQGCMD KGKELTGLGNALKNPFGNVGLLMGEAGKQLRRRTGIGSGLSLSGIVHPELSRSGELAVQALDQFATVVEAKLVKHKKGIV NEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGYPTAQHEKMLCDSWCIEAATRIRENMASLQSSPQHQELFRNFRSISK AMVENGGLVTGNPLGI P50544 1.3.8.9 FLAVIN-ADENINE DINUCLEOTIDE 0.0007855499999999999 2 FAD singleParticle particle 3.82 7.14 20.0 NH2C(CH2OH)3 tris 150.0 NaCl sodium chloride 0.05 C24H46O11 DDM 2.5 C16H19N2NaO14S2 BS3
pH was corrected at room temperature ~22 C
 UltrAuFoil GOLD 300 GOLD HOLEY GLOW DISCHARGE AIR ETHANE 100 277 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 1.5 2.9 GATAN K3 BIOQUANTUM (6k x 4k) 45.0 1
ACADVL is associated with complex I and the startup model used was EMD-11377.
 4.3 FSC 0.143 CUT-OFF 8793 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_16515.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 450 450 450 0 0 0 450 450 450 608.4 608.4 608.4 90.0 90.0 90.0 X Y Z -2.3057506 4.9198847 0.0009581706 0.25442776 1.352 1.352 1.352 1.2 AUTHOR globally sharpened map (locally refined). emd_16515_msk_1.map emd_16515_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 450 450 450 0 0 0 450 450 450 608.4 608.4 608.4 90.0 90.0 90.0 X Y Z -6.015943 6.696305 0.0009770285 0.7181365 1.352 1.352 1.352 AUTHOR half map 2 emd_16515_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 450 450 450 0 0 0 450 450 450 608.4 608.4 608.4 90.0 90.0 90.0 X Y Z -6.9590945 6.372019 0.00093931204 0.71822363 1.352 1.352 1.352 AUTHOR half map 1