2023-09-20 REL PDBe PDBe PDBe 2022-09-05 2022-10-26 2022-10-26 2023-09-20 Not funded Structure of RIP2K dimer bound to the XIAP BIR2 domain Pellegrini E Cusack S kinase, BIR2, complex, dimer, IMMUNE SYSTEM Lethier M Huard K Hons M Favier A Brutscher B Boeri Erba E Abbott DW Cusack S Pellegrini E Structure shows that the BIR2 domain of E3 ligase XIAP binds across the RIPK2 kinase dimer interface. Life Sci Alliance US 6 2023 37673444 doi:10.26508/lsa.202201784 2575-1077 8aza FULLOVERLAP dimeric RIP2K bound to XIAP BIR2 domain dimeric RIP2K bound to XIAP BIR2 domain 0 1 2 RIP2K dimer 1 2 Homo sapiens BIR2 domain of E3 ligase XIAP 1 1 Homo sapiens E3 ubiquitin-protein ligase XIAP Homo sapiens 0.010229516999999999 1 Escherichia coli LEVO YPRNPAMYSEEARLKSFQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGR NLNIRSE P98170 2.3.2.27 Receptor-interacting serine/threonine-protein kinase 2 Homo sapiens 0.036412879 2 Spodoptera frugiperda LEVO MNGEAICSALPTIPYHKLADLRYLSRGASGTVSSARHADWRVQVAVKHLHIHTPLLDSERKDVLREAEILHKARFSYILP ILGICNEPEFLGIVTEYMPNGSLNELLHRKTEYPDVAWPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHV KIADFGLSKWRMMSLSQSRSSKSAPEGGTIIYMPPENYEPGQKSRASIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMY SVSQGHRPVINEESLPYDIPHRARMISLIESGWAQNPDERPSFLKCLIELEPVLRTFEEITFLEAVIQLKKTKLQSV O43353 2.7.11.1 ZINC ION 6.5409e-05 1 ZN singleParticle particle 7.5 ETHANE FEI TITAN KRIOS OTHER BRIGHT FIELD FIELD EMISSION GUN 300 0.8 2.5 165000.0 GATAN K2 QUANTUM (4k x 4k) 46.7 1 5NG0
Other IDs used: 4C8B,4J3Y
 3.15 FSC 0.143 CUT-OFF cryoSPARC 3.3.2 173600 MAXIMUM LIKELIHOOD cryoSPARC 3.3.2 MAXIMUM LIKELIHOOD cryoSPARC 3.3.2 emd_15757.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 248.1 248.1 248.1 90.0 90.0 90.0 X Y Z -0.45508128 1.1479805 -0.0013349224 0.025402075 0.827 0.827 0.827 0.125 AUTHOR cryo EM map of RIP2 kinase dimer with bound the BIR2 domain of E3 ligase XIAP RIGID BODY FIT REAL emd_15757_msk_1.map emd_15757_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 248.1 248.1 248.1 90.0 90.0 90.0 X Y Z -1.5001544 2.5989082 -0.0008728502 0.03766563 0.827 0.827 0.827 AUTHOR map sharpen at -100 A2 emd_15757_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 248.1 248.1 248.1 90.0 90.0 90.0 X Y Z -0.53285724 1.2745785 0.000058967915 0.031230256 0.827 0.827 0.827 AUTHOR emd_15757_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 300 300 300 0 0 0 300 300 300 248.1 248.1 248.1 90.0 90.0 90.0 X Y Z -0.5983276 1.3174199 -0.000028197594 0.031120801 0.827 0.827 0.827 AUTHOR