2023-02-08 REL PDBe PDBe PDBe 2022-08-01 2023-02-08 2023-02-08 2023-02-08 German Federal Ministry for Education and Research 03Z22HN22 Germany German Federal Ministry for Education and Research 03Z22HN23 Germany German Federal Ministry for Education and Research 03Z22HI2 Germany European Regional Development Fund ZS/2016/04/78115 European Union European Regional Development Fund European Union Agence Nationale de la Recherche (ANR) ME 4165/2-1 France Agence Nationale de la Recherche (ANR) KE 1478/7-1 France Austrian Science Fund I 5359-N Austria Cryo-EM Snapshots of Nanodisc-Embedded Native Eukaryotic Membrane Proteins Janson K Kyrilis FL Tueting C Alfes M Das M Traeger TK Schmidt C Hamdi F Keller S Meister A Kastritis PL Janson K Kyrilis FL Tuting C Alfes M Das M Trager TK Schmidt C Hamdi F Vargas C Keller S Meister A Kastritis PL Cryo-Electron Microscopy Snapshots of Eukaryotic Membrane Proteins in Native Lipid-Bilayer Nanodiscs. Biomacromolecules US 23 5084 5094 2022 36399657 doi:10.1021/acs.biomac.2c00935 1526-4602 EMD-15516 associated EM volume SB-DIBMA solubilized Chaetomium thermophilum membranes mMW fraction SB-DIBMA solubilized Chaetomium thermophilum membranes mMW fraction 0 1
Sample was created by solubilizing native chaetomium termophilum membranes with the aid of the copolymer SB-DIBMA
Thermochaetoides thermophila mycelia singleParticle particle 0.5 7.4 200.0 NaCl sodium chloride 50.0 C4H11NO3 Tris
Solutions were freshly prepared, sterile filtrated, and sonicated before usage
 Quantifoil R2/1 COPPER 200 CARBON HOLEY ETHANE 95 277.15 FEI VITROBOT MARK IV
Blotting time of 12 s Blotforce of 0.
This sample was purified by size exclusion chromatography. Subsequently, multiple fractions in the medium molecular weight region were pooled together to obtain a higher protein concentration.
 TFS GLACIOS OTHER BRIGHT FIELD FIELD EMISSION GUN 200 100.0 2.7 0.8 2.0 240000.0 236566.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN 77.15 103.15 14.7
Grid screening was performed manually until criteria for good acquisition areas was narrowed down.
FEI FALCON III (4k x 4k) COUNTING 4048 4048 1 5912 64.72 1 1720004
particles were picked automatically with the blob picker function of cryosparc
 1 18.59 FSC 0.5 CUT-OFF cryoSPARC 3.1 7253 MAXIMUM LIKELIHOOD cryoSPARC 3.1 MAXIMUM LIKELIHOOD cryoSPARC 80 900.0 cryoSPARC 3.1 emd_15516.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 350 350 350 0 0 0 350 350 350 207.12999 207.12999 207.12999 90.0 90.0 90.0 X Y Z -0.29168278 0.39386806 0.005636673 0.02391745 0.5918 0.5918 0.5918 0.0868 AUTHOR emd_15516_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 350 350 350 0 0 0 350 350 350 207.12999 207.12999 207.12999 90.0 90.0 90.0 X Y Z -0.2519884 0.36025774 0.0028314253 0.033948198 0.5918 0.5918 0.5918 AUTHOR emd_15516_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 350 350 350 0 0 0 350 350 350 207.12999 207.12999 207.12999 90.0 90.0 90.0 X Y Z -0.23088774 0.34411907 0.0027643999 0.033369105 0.5918 0.5918 0.5918 AUTHOR