2023-06-07 REL PDBe PDBe PDBe 2022-07-21 2023-04-05 2023-04-05 2023-06-07 Not funded Cryo-electron tomogram of Agathobacter ruminis DSM 29029 Wimmer BH Microbiome, Bacterium, Rumen, UNKNOWN FUNCTION Wimmer BH Morais S Zalk R Mizrahi I Medalia O Phylogenetic diversity of core rumen microbiota as described by cryo-ET. Microlife 4 uqad010 uqad010 2023 37223726 doi:10.1093/femsml/uqad010 2633-6693 EMD-15445 associated EM volume Agathobacter ruminis DSM 29029 Agathobacter ruminis DSM 29029 0 Agathobacter ruminis DSM 29029 tomography cell 7.4
PBS
 Quantifoil R2/1 COPPER 200 CARBON HOLEY GLOW DISCHARGE ETHANE HOMEMADE PLUNGER
5ul bacteria + 3ul gold mixed on grid, blot for 4 seconds.
Cultured to early stationary phase in YCFA-Glucose, diluted to OD 0.15 in PBS.
Aurion 10 NO SECTIONING FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 50.0 2.7 6.0 6.0 64000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GATAN K2 SUMMIT (4k x 4k) COUNTING 3708 3838 1-7 1.4 3.41 1
movies aligned using alignframes.
BACK PROJECTION IMOD 4.1.X 41 emd_15445.map.gz 1 IMAGE STORED AS SIGNED BYTE 960 928 750 -17 16 -375 960 928 750 8485.439 8202.592 6629.25 90.0 90.0 90.0 X Y Z -128.0 127.0 16.651260000000001 9.233053 8.839 8.839 8.839 AUTHOR binned, CTF-corrected, dose-filtered WBP of a cryo-electron tomogram of Agathobacter ruminis DSM 29029