REL PDBe PDBe PDBe 2008-06-10 2008-06-10 2009-04-01 2014-04-16 Complex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNP Connell SR Topf M Qin Y Wilson DN Mielke T Fucini P Nierhaus KH Spahn CMT ribosome,translation,LepA,EF4 Connell SR Topf M Qin Y Wilson DN Mielke T Fucini P Nierhaus KH Spahn CM A new tRNA intermediate revealed on the ribosome during EF4-mediated back-translocation. NAT.STRUCT.MOL.BIOL. 15 910 915 2008 19172743 doi:10.1038/nsmb.1469 3deg FULLOVERLAP Complex of elongating Escherichia coli 70S ribosome (2tRNAs) and EF4(LepA)-GMPPNP Complex of elongating Escherichia coli 70S ribosome (2tRNAs) and EF4(LepA)-GMPPNP 4 2.6 70S ribosome false Escherichia coli ribosome-prokaryote: ALL EF4(LepA) Escherichia coli 1 true Escherichia coli pET14b A-tRNA Escherichia coli TRANSFER SINGLE STRANDED false P-tRNA Escherichia coli TRANSFER SINGLE STRANDED false singleParticle particle
20 mM HEPES-KOH (pH 7.6), 4.5 mM Mg(CH3COO)2, 150 mM NH4CH3COO, 4 mM B-mercaptoethanol, 2 mM spermidine, and 0.05 mM spermine
 ETHANE 95 OTHER
Vitrification instrument: vitrobot
 FEI POLARA 300 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 0.5 3.9 39000.0 OTHER KODAK SO-163 FILM PRIMESCAN 4.7 20 Eucentric
Defocus groups
 C1 10.9 FSC 0.5 CUT-OFF spider 41294 emd_1524.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 150 150 150 -75 -75 -74 150 150 150 378 378 378 90 90 90 Y X Z -5.05751 11.5594 0.00000000080912 1.0 2.52 2.52 2.52 1.0 Complex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNP
::::EMDATABANK.org::::EMD-1524::::
 2i2p RIGID BODY FIT SITUS
Protocol: Rigid Body. the subunit was fitted using situs
RECIPROCAL 2i2t RIGID BODY FIT SITUS
Protocol: Rigid Body. the subunit was fitted using situs
RECIPROCAL 3cb4 FLEXIBLE FIT Mod-EM and Flex-EM
Protocol: Rigid Body and flexible fitting. the protein was first rigidly fit with Mod-EM and then flexibly fit with Flex-EM
cross-correlation REAL