2024-07-24 REL PDBe PDBe PDBe 2022-04-26 2022-11-30 2022-11-30 2024-07-24 Swiss National Science Foundation SNF Grants CRSII5_177195 Switzerland Swiss National Science Foundation NCCR TransCure (185544) Switzerland Cryo-EM structure of a CRISPR effector in complex with a caspase regulator Babatunde EE Davide T Bertrand B Sergey N Alexander M Henning S Dong CN CRISPR-cas, effector, regulator, CrRNA, guide RNA, antiphage, ANTIVIRAL PROTEIN Ekundayo B Torre D Beckert B Nazarov S Myasnikov A Stahlberg H Ni D Structural insights into the regulation of Cas7-11 by TPR-CHAT. Nat.Struct.Mol.Biol. US 30 135 139 2023 36471056 doi:10.1038/s41594-022-00894-5 1545-9985 EMD-14847 other EM volume
NTD
 7zoq FULLOVERLAP Cas7-11 with TRP-CHAT-full Cas7-11 with TRP-CHAT-full 0 1 2 3 Desulfonema magnum 0.31 TPR-CHAT Desulfonema magnum 0.09538682 1 Escherichia coli LEVO MSSAFSGLKIPELSVDPAEVFKSDNPQLVSVLLDEFELQEQRPFFSGLIPEKQINIALKKSPQLKKLACHLLEAYEINGR RWKHADRRRVLEKAIRLLEKVSNELKGDIQKLENNVKESGKDSEELNKTREKHGEILADMGRAYLHRAKIIRPKGFTIPA KKKESLRKALDFCKEAKARHLAGLVGLEMDRCDMSDFDSENSLEKLLRDATTGVSLSKDQYYSNEYRKAEYYQMCIRLAE IEEDKHGATDEGSENNRYKRLEGILGPKKSQGKKKGKKNKKKKGTNSKSALEKIMAFEKFKVAVYLGEGKEKTHWNDFSE FLMRYPFSHPSWEDSVRFLRRLYKKGNDKWRELSVALWEIAKKNSAKTSSIHLRWYWSRQRDLYDLAFLSALEQADIAED ESVRQEKLRLAAKVADSAKNRPALTWQAMEQMADKDEALKKEIENYAQALGGGYIEQFEKTELPKNTNPQDDIPDDLKTS GLVVQFYLVHLKDYENGYALIYDGKTKKWSCEMFNFFPIWEKYLQWQSVYFDLPANQKEESADQLKALCLELGRHLYFLF DFEENRKAHEKNQDTAKENWDMLFIPHDFLHRVPIHGAIKKNGTNILLKKFNCTYFPTLPNASITPESPKSDNVAELIEY FSEHEKDYSEYFDKIEHIFDKKNRAATSQDLLDAAISPPRTLTIYCHGQSDVNNPFYSRLLLKDKLELIKLATLQEHYSG THIFLGACETDLMPPLSAPLDEQLSMAAMFLQKGVGSVLGTLWEAYPRAVKDIVKNILSADDTQYFEKLFSLKKKISVNQ KKSLYYYLCFKLYRSFDQIGKE cas7-11 Desulfonema magnum 0.207402859 1 Escherichia coli LEVO MGSSHHHHHHSQDPMQHIIPLTITFLESFRVIEWHKSSDRNSLRFLRGYAYARWHRSLKNNKGRPYITGTLVRSAIIRAA EELLWLNDGNYKGAICCPGEFNGSNAKVFREGKARRLRRRQTLTWPTKCACHEKEPCPFCLLLGRYEKSSKTSKSPVLNN VNFSNFNVLGKEKEFLNIEDVADMRVVNRVDQQSGKAEDFFNIWEITDGAWKIFRGEIQVSDKGWSDEENFSKFLTLLKG ASVLVDKISGGLCYLTLDKPELAELPAVKTEKDVLEPGDDASVLEISRPPYWNNMLNLAGTISEAFEREDKLVHLRLFAD TVRELRRSDIETLDLPKGHADRLGKPSDHFIWDIEINKKVKLRNWLFWIFNEFRDTYAYFDWRTFCEALGQALYLEAKKQ VPNQFSSERPVGATPAMEVKTPEHDPGRAAQGPRYEWLIKGELVSQTPFFFGWSTEADNREHTNLKLLAARDGRLRLPLS VLRGILRRDIKVVLDNKCRAELAMKQPCSCPVCNLMKKITIRDSFSSNYAEPPKIRHKIRLDPKSGTVAKGALFDSEVGP RGVVFPFELRLRSADDTLPQALKTVFSWWQQGTVSFSGDAGTGKGIFCLRNLKSIRWDLKTEMDKYAATLGGRKTPVGKW DKCHIPDDKTYPWVKETVEISVCSPFITKDPVNSLIDSAGYDAICYTTVDLEKSENINSLPESEISLLFEMFDLQYPMSY LFPNKDIYLLKGESFRGMLRTAVGRGENLLLREHEDCSCTLCRIFGNEHNAGKIRVEDFIIQGEPRTKLVDRVAIDRFTA GAKDKFKFDAAPIVGTPTNKLKFRGNIWIHRDLDGLACESLKLALEDIENGLYPFGGLGNAGFGWVNYNPLSHPAQEENK ADFSLTKKMELNWSMKELSTDKIYWPHYFLPFGKKVLREKTPPSHACIDENEDSELYSGKIVCTLETRTPLIIPDSEFQG EEHKSYDFFNLNGELCIPGSEIRGMISSVFEALTNSCMRIFDEKKRLSWRMNPNKKDKKNNNRRELDDFIPGRVTNDRKM EEMKEYRYPFYDQAITANDKQNKYFDQWEATIELTDESLEKLKAEKILQSVLDALRPLTKKKEKYKNTETFVFDLKKFIG KIDDNQQMISEALERGKVRLTGNSLKQISKTKKIPRQILNQLKGLKDNTYENREQFISVLKTTVRGINDEQISLILDNID EDVRLTDLSLTKIRKAKVPQTLVDMLADLKKDEPYKNEKEFLSEFKKKMGEIIGLILKHAAKTGGDVPRYNHPTPTDKML LSLAAYNRNHKHENGKAEYRIVKPKHNLKVDFMFAVTPFENPFKGYNPAAVVEEPVGGYLKVSGPNKIEKVKKVNPNSVS VRDDKNQEIIHNGVYLRKITVANAKSKNKLRERLVPEFAWYDKDSEAAYAMTKRCERVFVEIGAKPIPIQPSAREKFKIL TQEYQKNAKQQKTPEAFQTILPKDGELRPGDLVYFREDKKTNTVTDIIPVRISRTVDDEVLARKIPDDVGDVRPCVREIL DKEKQKEIADAGVKEVFQHHPDGLCPACSLFGTTFYKGRIAFGFAFHKDKDPELANNGKHITLPLLERPRPTWSMPKKES RVPGRKFYVHHQGWERVIKHSNLDESDPNATKQTVNNRSVQAIKEEQKFQFEVRFENLREWELGLLVYVLQLEPQFAHKL GMGKALGFGSVRIRVGEIHSGPKELDESRLVSSAMKKMEEIWDRDKNVLEKLFRLLYFNESKDIKVRYPKLQKEKEEEEE ESGYMELAKEEYQPEQRRNKLTNPWEGWGNILKKPAILI RNA (39-MER) Desulfonema magnum 0.012344250999999999 1 UAUGUGAUGGAACCUCUCCGGAUAAUUCUAUCUCUUCUG ZINC ION 6.5409e-05 4 ZN singleParticle particle 1.2 7.5 Quantifoil R1.2/1.3 GOLD 400 GLOW DISCHARGE ETHANE 100 298 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 0.8 2.5 96000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN FEI FALCON IV (4k x 4k) 60.0 1 1719283 C1 BACK PROJECTION 3.2 FSC 0.143 CUT-OFF cryoSPARC 65755 ANGULAR RECONSTITUTION cryoSPARC ANGULAR RECONSTITUTION cryoSPARC cryoSPARC emd_14848.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 260 260 260 0 0 0 260 260 260 331.99402 331.99402 331.99402 90.0 90.0 90.0 X Y Z -0.38358805 0.9311176 0.00010264354 0.03371714 1.2769 1.2769 1.2769 0.1 AUTHOR 752 AB INITIO MODEL REAL 43.0 emd_14848_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 260 260 260 0 0 0 260 260 260 331.99402 331.99402 331.99402 90.0 90.0 90.0 X Y Z -0.3396402 0.84935564 0.00010264353 0.03068225 1.2769 1.2769 1.2769 AUTHOR 752 emd_14848_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 260 260 260 0 0 0 260 260 260 331.99402 331.99402 331.99402 90.0 90.0 90.0 X Y Z -0.25385717 0.5755893 0.00010187143 0.019194372 1.2769 1.2769 1.2769 AUTHOR 752 emd_14848_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 260 260 260 0 0 0 260 260 260 331.99402 331.99402 331.99402 90.0 90.0 90.0 X Y Z -1.7173767 1.7186012 0.0003811862 0.2174082 1.2769 1.2769 1.2769 AUTHOR 1 emd_14848_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 260 260 260 0 0 0 260 260 260 331.99402 331.99402 331.99402 90.0 90.0 90.0 X Y Z -1.900912 1.7131389 0.00041023252 0.21633975 1.2769 1.2769 1.2769 AUTHOR 2