2024-11-20 REL PDBe PDBe PDBe 2022-04-19 2022-11-30 2022-11-30 2024-11-20 Max Planck Society Germany Laube E Kuehlbrandt W Proton transporter, Mitochondrial membrane protein, Complex, OXIDOREDUCTASE Laube E Meier-Credo J Langer JD Kuhlbrandt W Sci Adv US 8 eadc9952 eadc9952 2022 36427319 doi:10.1126/sciadv.adc9952 2375-2548 7zmb FULLOVERLAP Mitochondrial NADH:ubiquinone oxidoreductase in LMNG Mitochondrial NADH:ubiquinone oxidoreductase in LMNG 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 Chaetomium thermophilum var. thermophilum DSM 1495 0.97 NADH-ubiquinone oxidoreductase chain 1 Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.041716406 1 LEVO MSYSQTINSLVEVVLVLVPSLVGIAYVTVGERKTMGSMQRRLGPNAVGIYGLLQAFADALKLLLKEYVGPTQANLVLFFL GPVITLIFSLLGYAVIPYGPGLAVNDLSTGILYMLAVSSLATYGILLAGWSANSKYAFLGSLRSTAQLISYELVLSSSIL LVIMLSGSLSLTVIVESQRAIWYILPLLPVFIIFFIGSVAETNRAPFDLAEAESELVSGFMTEHAAVIFVFFFLAEYGSI VLMCILTSILFLGGYLLISLLDIIYNNLLSWIVIGKYIIFIFPFWGPVFIDLGLYEIISYLYNAPTVEGSFYGLSLGVKT SILIFVFIWTRASFPRIRFDQLMSFCWTVLLPILFALIVLVPCILYSFNIFPVNISLL G1DJA6 7.1.1.2 NADH dehydrogenase subunit 2 Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.06412918 1 LEVO MIMISILSLLLSTSVTLRRDMSILFNRISIIALAYCILHDTMSLSFISKGIGLHGGLLHITNLTQIFHIFIFIISILILQ LTSFYPRKVWIPEYSSLKDIFFNKILYYRTKIINKMGEHMKIIEYPLILLFVISGAVFLISTNDLVSIFLSIELQSYGLY LLSTIYRNSELSTTGGLIYFLLGGLSSCFILLGTSLLYVNSGTTSLDGLYILNSISDVNPVVAGVGEDGGLTSWYKPYYL NFSLLIFSIGFLFKVSAAPFHFWSPDVYDAIPTIVTTFVAIIAKISIFIFLLELVYYTNSNANSYLSEFSWTYALLISSL LSLIIGTVVGLTQFRIKRLLAYSTISHVGFILLALSVSSIESTQAFIFYLIQYSISNLNAFFILITIGFSLYGYVTNNKE YKSLLDKNNSPIQLISQLKGYFYINPLLSLSLAITIFSFVGVPPLVGFFAKQMVLSAALDNGYIFLSLIAIITSVIGAVY YLNVIKEIFFYSPEHEVNPVLNESDSNFSLRILNEKNVLIRSVLLKGRNIFISSPFSITISIITNVILLFIFMNKEWLSM GTILVQILFSA G1DJ98 NADH-ubiquinone oxidoreductase chain 3 Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.01633003 1 LEVO MSAMSIYIIFVSIIAILFLAIDLIFAPHNPYKEKLSAFECGFHSFSQSRSPFNISFFIYGLVFLLLDLEILLLYPFAVSE YVNSAYGLAAALIFIGIITIGFVYELGHDALKVHSRQNISTKDLKSSVVISYLGNINNDSVNLHIK G1DJ99 7.1.1.2 NADH-ubiquinone oxidoreductase chain 4 Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.060810309 1 LEVO MSLLYVLLIIPIIGIFLISTIDSFYPVTNTNIVLNKKFFRGFNDARQPIKYLYFSEGESFNIENKEDSFFNVSYYKKIAL ITTILNLIVSLIIYILFDFSNNQFQFIQENLDLSFYDIYLGVDGVSIYFVLLTTIIMPIALVSNWNSITNNIKSYLIIML LLETLLLAVFLVLDVLLFYIFFESILPPLFILIGLFGSSNKVRASFYIFLYTLLGSLFLLLSILTMSSIVGTTYFDVLLK SSFEYTTQLFLFFGIFIAFAVKTPVWGLNSWLLRAHVESPLGGSIVLAAIVLKLSLYGVFRLILPILPQASLNLTYIVYA IGAITVLYASFSTLRTVDVKELIAYSSVAHAAIYLMGVFSNTIQGLEGAILLGLAHGFVSSGLFICAGGILYDRTGTRLI YFFRGLTQIMPLFSLFFFILCLGNAGTPLTLNFVGEFMSLYGTLERLPIAGMLASTSIIFSAAYSIYMYNRIAFGGSVSL YFIDCFRDLTKREFFILFTLVSFTVILGIYPSFVLDGLHYNISSVVYGIEPNASYLTQGGNL G1DJA7 7.1.1.2 NADH-ubiquinone oxidoreductase chain 5 Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.07587203099999999

Discrepancy with annotated entry sequence. Probably wrong intron-exon boundaries. Amino acids added according to map density, genome sequence and MS data.

1 LEVO MYLSIIILPLLGSVVSGFFGRKVGVSGAQLITCSSVIITTILSIIAFFEVGFNNIPVTINIFRWIDSEWFIINWGFQYDS LTVSMLIPVLIISSLVHIYSISYMSSDPHNQRFFSYLSLFTFMMIILVTANNYLLMFVGWEGVGVCSYLLVSFWFTRIAA NQSSISAFLTNRVGDCFLTVGMFAILWSLGNLDYATVFSLAPYINSNVVIIIGICLLIGAMAKSSQVGLHVWLPMAMEGP TPVSALIHAATMVTAGVYLLMRSSPLIEYSSTVLLLCLWLGAITTVFSSLIGLFQQDIKKVIAYSTMSQLGMMVLSIGLS SYNIALFHLVNHAFYKALLFLGAGSVIHAVADNQDFRKFGGLISYLPLTYSVMLIASLSLVAFPFMTGFYSKDFILESAY GQFSFSGVAVYIIATIGAIFTTLYSVKVLYLTFLSNPNGPRTYYRLAIDNFFSAQAIKSYKPAHEGDFFLTLPLVILALF SIFFGFITKDIFIGLGSNFFVDNSLFIHPIHEIMIDTEFAVPVLFKLLPFIFTISFSVIALTLSELLSELVIYFKFSRFG YNIFGFFNQRFLIEFFYNKYITNLILNLGGQITKILDKGSIELFGPYGLERGLVKLSKNISSLSTSHVTTYALYILVGFI LYLIYNNLLLDYSYLLLIIILLLLLMMIGESNSEDVTLH G1DJA3 7.1.1.2 NADH-ubiquinone oxidoreductase chain 6 Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.024819291 1 LEVO MNSQISLLLLKEIYTNGSTHIMLDILSVLAVISGICVIISKNPIVSVLHLIGLFAYVSFYLILIGLNFVGLSYLIVYIGA VSILFLFILMLINIRTSELQSNTSNSIPLTILVGIIISSFLFKMLPYGVIISNQFNSSNLNENLYTIQIVGGEDNNINNI NTDKNDLFFITSKIWDGALAENNHISSIGNIMYTNYNVWLILASFILLLAMVGAIVITIKPRKI G1DJ96 7.1.1.2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.010312749999999999 1 LEVO MATDAAETSRRATREEMRDAKVPLAYRDSCAHLLIPLNRCRYETYYLPWKCEDERHSYEKCQYLEFKKRVQKMEELREAK GGARSN G0SAE9 Subunit NDUFS5 of NADH-ubiquinone oxidoreductase (Complex I) Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.08714232799999999

Discrepancy with annotated entry sequence. Probably wrong intron-exon boundaries. One additional amino acid modelled according to map density and genome sequence.

1 LEVO MASGYGLNGGPSRCFPFWQELLACYVTNSSEDNPDGKNKCIPVMEDYYECLHHRKEAARVRALQAAYREAEAKKLQENPP TAGQIRNLGLLNKEEDTKKVHCATATQQWMKMCFALSAKMPCLRGIEVFLTTRPDNEKIPEYPHPEGTSARVICGQHLIR SPSLASNLSNSAITPPSSFSPRKANPLVSVYLPSVPGTPFTINYKISQVPPEPCKYLFFRLYINARPMVSWGIDPHSRPY GKVIKSLWLPSDDRYRGLVGFEKRSFVFLPGEEFKSVAEDGGLIEVQVFRAKDRRARTPKLETFRFRDNYGIAAPSIGLL DKPQNAFFYDWLLIDPKDEPFAKFRMHYRSWRNLKSLNLIPSSEWELLLAVSPKALRTAASTGKIEKPTSPAFSDSDSDD SLCSATDSDECVFDDHSKKTKSNRSKESPFAFLNSPPERFRAMAPSSEKLPQPSKLLRDSQRAPYQSRPLPELPVEAGVN STGLNPPSVKVAADLRRKPSATSMESNAVSITPSLLRCMEEGTLDLEKAEVGIAKLVKVAASGSEPSSSSSSATQLTVSA VREVELRPPQPERKGGLPMDYSFSDYEKSSQSSFGDDERMSNISDMEEKPFPAPPTCYLPTTGSGLERELAMFDSPSPSP VPYSAMEPPVTPSPSSTPYKTKLGRKPLLFSRRLGLFSPRKSLPSDFLLGQAKKLVVEEETTNSNVSLAFGELTVTDMRA ESPSPAPKGKPLRRFSTIRVEEISIKEKRPLFNSLRRIASASPRKLAGRVLSMDLGKKGGEEKEG G0SG48 NADH-ubiquinone oxidoreductase-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.082096516

Discrepancy with annotated entry sequence. Probably wrong intron-exon boundaries. Amino acids removed and added to sequence according to map density, genome sequence and MS data.

1 LEVO MLRQTLARSAWRTGKHPAAAARTAGAATRAFSASAQRPAEVELTIDGKKVSIEAGSALIQACEKAGVVVPRYCYHEKLAI AGNCRMCLVEVERSPKPVASCAWPVQAGMVVKTNSPLTHKAREGVMEFLLANHPLDCPICDQGGECDLQDQSMRYGADRG RFHEIGGKRAVEDKNIGPLIKTSMNRCIHCTRCVRFMNDIAGAPELGSTGRGNDLQIGTYLEKNLDSELSGNVIDLCPVG ALTSKPYAFRARPWELKRTESIDVLDGLGSNIRVDSRGLEVMRILPRLNDDVNEEWINDKTRFACDGLKTQRLTMPLVRR DGKFEPATWEQALTEIAHAYQTLAPKENEFKVIAGQLVEVESLVAMKDLANRLGSENLALDFPGGSQPLAHGVDIRSNYL FNSKIWGIEEADAILLVGTNPRHEAAVLNARIRKQWLRSDLEIAAVGQPWESTFDYEHLGTDLAALKNALSGPFGEKLKK AKRPMIIVGSGVTEHPDAKAFYETVWSFVEKNASNFLTEEWCGYNVLQRAASRAGAFEVGFVVPSPEVAATKPKFVWLLG ADEFDPADVPKDAFIVYQGHHGDRGAEIADIVLPGAAYTEKAGTYVNTEGRVQMTRAATGLPGAARTDWKIIRAVSEFLG VPLPYDDVAQLRDRMAEISPALAAYDVVEPVALRHLSKVQLVDQNKGAKVTGEPLKKVVENFYFTDVISRSSPTMARCSA AKETGDPRTNFMAPGMEEDRPMGQIAYGA G0RYA1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.05545309 1 LEVO MLSRTAAPAKASAKTISSAVSSAAAAAATTSAASTPQSRAYATVQDPNYATVRTYGGLKDQDRIFQNLYGRYPPDLKHAK KMGDWYKTKEILLKGHDWIIGEIKASGLRGRGGAGFPSGLKWSFMNFKDWDKDNKPRYLVVNADEGEPGTCKDREIMRKD PHKLVEGCLVAGRAMNATAAYIYIRGEFYQEAAILQNAINEAYAEGLIGKNACGSGYDFDVYIHRGAGAYVCGEETSLIE SLEGKPGKPRLKPPFPAAVGLFGCPSTVANVETVSVAPTICRRGGAWFASFGRERNHGTKLFCISGHVNNPCTVEEEMSI PMRELIEKHCGGVRGGWDNLLAVIPGGSSTPILPKHICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDVVRAISRLSHFY RHESCGQCTPCREGSKWTDQIMKRFEKGMGRPREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARMKKFA EETGGQALAGGWTHDSRQKGRLVSPGM G0SA46 7.1.1.2 NADH-ubiquinone oxidoreductase 49 kDa subunit-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.055910315999999995

Discrepancy with annotated entry sequence. Probably wrong intron-exon boundaries. Amino acids removed according to map density, genome sequence and MS data.

1 LEVO MSASLYRLAGRSARRLATSAASRSRPLTSSSSFQLSSTASTPLSVRAFSASALRRYAEPQDGFQGTRLIPTGADFQSPPD PFIDEGARDNAANYGVQKSRSGVDEDSVEGRKVRHYTVNFGPQHPAAHGVLRLILELNGEEIVRADPHVGLLH(2MR)GT EKLCEYKTYMQALPYFDRLDYVSMMTNEQVFSLAVEKLLNIEIPPRAKFIRTMFGEITRILNHLMSVLSHAMDVGALTPF LWGFEEREKLMEFYERVSGARLHAAYVRPGGVHQDIPVGLLDDIYQWATQFGDRIDETEEMLTDNRIWINRLKGVGVVSA ADALNLSFTGVMLRGSGVPWDVRKSSPYDAYDQVEFDVPVGINGDCYDRYLCRMEEFRQSLRIIHQCLNKMPAGPVRYED YKITPPPRAAMKENMEALIHHFLLFTKGYAVPPGDTYTAIEAPKGEMGVYVVSDGSERPYRVHIRAPGFAHLSGFDHITR GHLLADAVAVIGTMDLVFGEVDR G0SCG0 Subunit NDUFA1 of NADH-ubiquinone oxidoreductase (Complex I) Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.009833353

No entry (not annotated). Sequence modelled according to map density, genome sequence and MS data. Last five amino acids unknown and modelled as Poly-Ala

1 LEVO MPVPFETLIPYGIIIAMFGVTGAGMAKVRHMFNGDKRHRWSVDQWDKQQMERDRRLTGHLRGQTDNPIAPPGFEFNNPWK V(UNK)(UNK)(UNK)(UNK)(UNK) NADH dehydrogenase (Ubiquinone)-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.043800855

Discrepancy with annotated entry sequence. Probably wrong intron-exon boundaries. Amino acids added according to map density, genome sequence and MS data.

1 LEVO MASLPTAVRSAAPKVARRALQQRRYISDIHITRTGKPLIRIQGGRSSLGEHTATVFGATGQLGRYIVNRLARQGCTVIVP YREEMAKRHLKVSGDLGRVIFMEFDLRNTQSIEESVRHSDVVYNLIGRDYPTKNFSLADVHIEGTERIVEAVAKYDVDRF IQVSTYNANPDSTCEFFRTKGIAEKVARHVFPETTIVRPAPMFGFEDRLLLKLASVTNLFTSNHMREKFWPVHVNEVGEA LERMLYDDSTAGQTFELYGPRQYSMAQIAELVDREIYKKRRHINLPKPILQPLAELINRVLWWDTGLSRDQVEREFHDQV IDPTAKTFKDLGMEPTDISKWTYHYLLPYRPSTYYDLPPSTEKEMREERKYLHVLDDQ G0SB35 NADH-ubiquinone oxidoreductase-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.029244955 1 LEVO MRATTRLLAVVRPATQAAASSASKGKFLVPGAPTGLTGLGTHPSPRSALLYLYHSTLEKLKQIPEHSVYRQSVEAVTRHR LALVESVVPEGYDAWVERAKKLLEEHADQFDPTKVGPEGGEEVQGARAVKVERDGRVFVVSRLPKEEDERVLEWDGEVDE GPELEGSRTLEEKIEGGLEKIFTRRDVKDTVGRVEWEPEPQLTAEQVAELENKIGAGLIEEVIQVAEGELKLVDTMVKAR VWEPLEEQPRPGQWEYFERKP G0S8H4 NADH-ubiquinone oxidoreductase 30.4 kDa subunit-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.033377097999999994 1 LEVO MASKLCKTRALASALRPISRSSRSTEAIANVAVVRSFATTPRLGVALPKDAPNPRAIPREPVGEIKQALVNPADKYQSKA DNLHKYGAWLMSCLPKYIQQFSVWKDELTIYICPTGVIPVFSFLKYNTNAEFTQVSDITAVDFPTREMRFEIVYNLLSVR HNARIRVKTYADEVTPVPSITSLYMGANWYEREVYDMFGVLFVGHPDLRRIMTDYGFEGHPLRKDFPLTGYTEIRYDEEK KRIVVEPLELTQAFRNFEGGSSAWDQVGPGIDRTPDTFKLPTPKPEEQSEEKK G0S8U1 Subunit NDUFV2 of NADH-ubiquinone oxidoreductase (Complex I) Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.035005953 1 LEVO MRRRQLSLQAGPFAEPKANQARKSSSNGERSSTTSQDHDPVRPGIDAAIARSLDTTAAMASKLTPLLMRTVARMGSRAMW AMVPAPARTLSTSAMRHSDTLMVHRNTPENNPDIPFKFTPENEKIIEQILKRYPPQYKKAAVMPLLDLGQRQHGFCSISV MNEVARILEMPPMRVYEVASFYTMYNRTPVGKFHVQACTTTPCQLGGCGSDAIVKAIKEHLGINQGETTPDGLFTFIEVE CLGACVNAPMVQINDDYYEDLTPETIKQVLTALKESVNDVSKAPKPGPQSGRQSCENSAGLTSLTSEPWGPEKTRPDL G0SDM6 Oxidoreductase-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.025415252

Sequence renumbered (compared to entry sequence).

1 LEVO MLPTPAALLVTRQLPLARVPSTLVRTLPIQALIARRTYATPAGPPPKNFRLPPPKNWDEESESTIDKVGKYFLMTEMLRG MYVLLEQFFRPPYTIYYPFEKGPISPRFRGEHALRRYPSGEERCIACKLCEAVCPAQAITIEAEERADGSRRTTRYDIDM TKCIYCGFCQESCPVDAIVESPNAEYATETREELLYNKEKLLANGDKWEPELAAAIRADAPYR G0SBG8 NADH-ubiquinone oxidoreductase-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.021612625 1 LEVO MAPIEEEHEHYHPKDAVHLGLKGAAVVGGIGLLFAAVRTSLARKNVGPWAIFTRNGKLAATFAAVGGAYDFTRAAAANLR EKEDWVNNGIGGLFAGATMGLTTGRIPRVLGFAALTGVVLATAEYAGSGLRGVFKRDVDEYERKEFLRKNRRRPIEETLA EIGEGRGIKPPGYYERRAQRLKEKYGVDINPVCADPDQA G0S2B3 NADH-ubiquinone oxidoreductase-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.025549581999999998 1 LEVO MISSARTGASLILRARPATQLIPLRAAAAAHLSSSARTQAAATSSSTAVEPYPGYELRKSLRKEVPLPSQEGTKGLVQYA LTTLDIITNWARQGSFWPMTFGLACCAVEMMHLSTPRYDQDRLGIIFRASPRQSDVMIVAGTLTNKMAPALRQVYDQMPD PRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTSEALMYGIFQLQRKMRNTKITRMWYRK G0S9I6 NADH-ubiquinone oxidoreductase chain 4L Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.009837997 1 LEVO MNITLILFLIGILGFVLNRKNIILMLISIEIMLLSITFLILLSSLNMDDIIGQTYAIYIIVVAGAESAIGLGILVAFYRL RGSIAIEYK G1DJA2 7.1.1.2 NADH-ubiquinone oxidoreductase-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.018613875

Discrepancy with annotated entry sequence. Probably wrong intron-exon boundaries. Amino acids added and removed according to map density, genome sequence and MS data.

1 LEVO MYASRGVRAVAQARQLISKRTFTATARQLSQTQTPTPAAPTATAEAEVAETGRPASAVMQAPNRAEVWSRSQRPRSEAMA GPRFEQTDFDAQPRPWAAIELIHKQPVRWTHDRIVACDGGGGPHGHPKIYINTDKPEIATCNYCGLPFANEHHRKYLESL PQTSYPLN G0S6J1 Acyl carrier protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.015593649

ZMP covalently linked to Ser98.

2 LEVO MFRSAVLRSAAAATRTTIRSIPPAAAKKFAVAPVSRVTSFIPKTASWQVIRCYASNEGLQKVEVYERIKSLLAGFDKVND PNNITETAHFANDLGLDSLDTVEVVMAIEEEFSIEIPDKDADQIHSVDKAIEYILRQPDAH G0SBG9 NADH-ubiquinone oxidoreductase B14 subunit-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.014836944999999999 1 LEVO MAVQPTKFAVTVRQSRNWADAKQRVIAAYRAWIRAAPEIQTMYSIPFPVSHIRTRIRQEFERHRYVNKLNVVDVLLQQSN ADFQETMNFWRQQSHVMAFFKEEHFRGEKRLPSNFITGFLEGRN G0S4Q3 Complex I-B22 Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.011636523999999999 1 LEVO MSNRQAALSLYRRALKLALDWTVHRNLWRGQALYIRSLFEKNRNVTDPRLQRALLKETEKLLEKWKHPDPYCPPTAPGGS KYERNLPVPNLEPPPPLKF G0SAY0 Complex I-ESSS Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.015847807

Sequence renumbered (compared to entry sequence) according to map density and genome sequence.

1 LEVO MDGGPPTFAFRPTARQAPGKLSSAPVTTRLAAAALSRASTVSSKALTPARFRFFSTTQRRAGGHGMQYDPPTGWLWGVRP GEKYQNEGWEGPFFYGFWGSLIVFAIAYAYKPDTSIQTWALEEARRRLEAEGILEDPNPTKKE G0SAN0 3.6.4.12 NADH-ubiquinone oxidoreductase Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.021517605 1 LEVO MATRKPAFNQHVLLDTTPLPDSIPKVKEIGASSAPLLSASFFIGARCKDYNDDYMQCKNENPGRGEFECLKEGRRVTRCA RSVLKDINTHCLEQFRAHWQCLDNNNQQLWQCRPAEWKLNKCVYENLKLEKVIPDQPKNSTPVHLRQRQIFAHHAIPPWE RPFIPGQPEPQLPAGIEIPEKYKNQS G0S0R3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.014039227 1 LEVO MPQDMPPPGGYEAVQYKRNLPSRGLFRPRPLLAGAAVLMLYGWYKLVKGIREQNELAREKMWARIHLIPLLQAEEDRDHV RRYLADQAREKGLLGENIKVYNSDRYVRPTFAVTPSKPAQE G0SB83 NADH-ubiquinone oxidoreductase-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.021645502 1 LEVO MSNTPTQTYQFPSKTVKTDYPLIDNDPHFTRVIRYARPSDYAHGLAAAAAGPAALWLMERISPSQVGRGGFAKAMRLAGF IGLAGGFLYFYQRSILRFYGMSENAREVEMDMREMTDRVKAGLPLYGESRLSPAMQGVAARQSRYSALFFGVMPWFNFVN HNQHGVDTAKYYQQAERELEAERLAREQAQQ G0S0S8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.023494629 1 LEVO MSSLRPAATSAARLLRNSTASSRATAVAVMPCRAAHNIHVPVQKERTKEDSPLATLPRNAPDYNVPIDIATSTFTPVPKN VQDGSEENVVPAGLISGAPMELQARTVRIYKPAKPATQSGEKNTQLWRMDWDVLGKGHRWENPLMGWQSSADFMQGTHLT FKTKEDAIAFAEKQGYEYFVQEPNERHFRPKAYANNFLYSPGKLKHIRTK G0S3Y7 NADH-ubiquinone oxidoreductase-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.021164697

Discrepancy with annotated entry sequence. Probably wrong intron-exon boundaries. Amino acids removed and added according to map density and genome sequence.

1 LEVO MASKAAAAAASNAVSITKKYTVQSTGIWERIRRALVIDPNRSNGVPLNPYNRNPSPGDNPPLEYTDPVTIPAGDIADNPY WKRDFRRNYPRPSVIAQAQQVALLSVGSAAQPRVELIGEEGTKALVAAEEEGKEKGVAKYLEEKGAEEAKRVLALTGGLP PTPSGQTMVTGQWDVHKYGLAEEQSYGGSYPCRSFV G0SEF0 NADH dehydrogenase (Ubiquinone)-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.023239686

Discrepancy with annotated entry sequence. Probably wrong intron-exon boundaries. Amino acids removed and added according to map density, genome sequence and MS data.

1 LEVO MLSRRLVRAVAPLRSPVLPAARRLPLIQQRTFLPEAMVGRSKIDEKYPDSDYPTLTDKEDPDMNGGYINPPRIKRQFRDP HADWWDKQERRNFGEPVHEDHDILGMFSPYEYTWITPGKGLFQIGLFIASFLGLCYVVKLTYPDRVSYPREFEGGLEREL GGAGAVRAFLCLDDEIMWMVSLYCLPASKLISSPVALQDKSTS G0RXU4 Subunit NDUFC2 of NADH-ubiquinone oxidoreductase (Complex I) Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.010823452999999999 1 LEVO MVNRILFWTGFGLAVRFWQLGIEMRPFFNRKSLWAYPLFGGVGASFGYWLQSIDEKQTKMLEERKQAILEKRARRAQRQA EAAATAPSPSAQEA G0S812 Subunit NDUFB3 of NADH-ubiquinone oxidoreductase (Complex I) Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.011153536 1 LEVO MQPTRILRNNGEKPNITGFDMREFLRHTKTPTYDPWERHEAWRYTGRFSRFNRFKGALPGFGIATVAFTAYCVFEHFFLK DDHHGHHGEKEHH G0S681 Subunit NDUFB10 of NADH-ubiquinone oxidoreductase (Complex I) Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.012514256999999999 1 LEVO MPTPESEAFLAKKPQVPPTFDGVDYEDNKRLKQAQDAIIREQWVQVMMGRLVREELSKCYYREGVNHLEKCGKLRERYLQ LLANAKVKGYLFEQQNYWSKENQQQ G0SEZ1 Subunit NDUFB2 of NADH-ubiquinone oxidoreductase (Complex I) Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.00527815

No entry (not annotated). Sequence modelled according to map density, genome sequence and MS data.

1 LEVO MAGGGQHVSRVHRFLATGLGASMWFWIFYRAKKDGPVLLGWKHPWD NADH dehydrogenase-like protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.010897595999999999

Discrepancy with annotated entry sequence. Probably wrong intron-exon boundaries. Amino acid removed according to map density, genome sequence and MS data.

1 LEVO MSGRYAFAKGVKELRFLFCQTSQHSAEARSFLNRAYPIMKKHNPTIPILLREAQGTIPRVYARYEFGREKMESLEGLTDK QIEETVAKLVKTEGA G0S1P3 Subunit NDUFA3 of NADH-ubiquinone oxidoreductase (Complex I) Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.009076461 1 LEVO MSATTPRFWSTPLKYCRWAARERPALFFSVVIGALGPVTLATVPPLRRLIGDVDAAPIPLTYPIPPGPRKQLKGYDDDTE DN G0RZZ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.015967092

Sequence renumbered (compared to entry sequence) according to map density, genome sequence and MS data.

1 LEVO MSYPTRTLANLRKIGLKEYFRQLLYIGDTKYGELVGVDKFGNKFYENKEELPLRTRWVDYAKHDYDAAHIEPMWHAWISY QVDTPPTREPLTQIERPWAPKEHVPNRSFTRGAYKPYNTTQPKIQSWEPKAAPR G0S775 Subunit NDUFB6 of NADH-ubiquinone oxidoreductase (Complex I) Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.010857294 1 LEVO MGGGPKIPYPKHVWSPAGGWYAQPANWKQNTAIFGLVIFGITAMVWKYSAEHEVRHKMPEPDRFYPSRYWVKQIKDYERA QKEKQQNNTEASS G0S569 Subunit NDUFB4 of NADH-ubiquinone oxidoreductase (Complex I) Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.008760335999999999 1 LEVO MAGLQHYKIAMDPALVRLGSMISNRYKYFRWTKRTALVSFMYVVVVPSTIGYLAYKTDGLWDLRAKRRGDLISER G0S5C8 Subunit NDUFB5 of NADH-ubiquinone oxidoreductase (Complex I) Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.020824342

Discrepancy with annotated entry sequence. Probably wrong intron-exon boundaries. Amino acids added and removed according to map density and genome sequence.

1 LEVO MLALRQRAALLARRVRPTVVVPRNARTYASSHDHDHHDHHHDHGHNVEEPLGAAFYIAVGGIASSFVIYNISRPGPNGEP SSLHKWFSKISDYKDEWETRNTLMAAALEQAAHDKHLLLTAERSRHIELKYPEVFSHGSPFNVPAGFYPNLDHVIEHYRK QHLEEEERKAKKLAAAAAAASEAR G0S086 Oxidoreductase-like domain-containing protein Chaetomium thermophilum var. thermophilum DSM 1495 DSM 1495 / CBS 144.50 / IMI 039719 0.041609055 1 LEVO MRRTILQARPSRVLSRALSSAHGSARPSFAIARSPNEQVFPAGAFYESILRWNPNPVPKPQPIEPPAPEPEPVVEEATPA EPEPVPEPVAEEKTPEPTPAPVEEKSAAPVEAEAEPAPVEEKAAVPEAAPEPEPEPVAEDKPAPEEKKSSRSPKRQQQEE SSSAEKPAEKPIRSSGRLDGASAPSPEPQPQDSSQEKPSITFLSGLSGPTSTSSYQSRLESIRSRSRLIAGVLVPPQPTE PDNCCMSGCVNCVWDAYREEMEAWAAAKAEAERRLAAQEVSSVVGTTEESMHAVEDGKRVERTLGVHGEVADRTGDMARE LEKGSTSMEEDGAGFGERMEWDEGLYKDVPVGIREFMKQEKRLREERLKRNRKETEHQQG G0S982 1,2-Distearoyl-sn-glycerophosphoethanolamine 0.000748065 17 3PE 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 0.0007901449999999999 8 PC1 CARDIOLIPIN 0.0014640429999999997 5 CDL Lauryl Maltose Neopentyl Glycol 0.001005188 3 LMN FE2/S2 (INORGANIC) CLUSTER 0.00017581999999999998 2 FES IRON/SULFUR CLUSTER 0.00035163999999999996 6 SF4 FLAVIN MONONUCLEOTIDE 0.00045634399999999997 1 FMN NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 0.000745421 1 NDP ZINC ION 6.5409e-05 1 ZN S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate 0.000568704 2 ZMP water 1.8015e-05 1593 HOH singleParticle particle 1.5 7.4 20.0 Hepes/NaOH 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (pH adjusted with sodium hydroxide) 100.0 NaCl sodium chloride 0.0015 LMNG lauryl maltose neopentyl glycol C-flat-1.2/1.3 COPPER 300 CARBON HOLEY GLOW DISCHARGE 45 ETHANE 100 277 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 70.0 2.7 0.5 3.0 105000.0 NITROGEN GIF Bioquantum 30 GATAN K3 BIOQUANTUM (6k x 4k) 1 6503 2.11 45.0 1 1087651 2.75 FSC 0.143 CUT-OFF cryoSPARC 3.0.1 21989 NOT APPLICABLE cryoSPARC 3.0.1 NOT APPLICABLE 6RFR PDB experimental model 6RFQ PDB experimental model emd_14794_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 588 588 588 0 0 0 588 588 588 492.156 492.156 492.156 90.0 90.0 90.0 X Y Z -0.81351304 3.109476 0.0013071685 0.060114827 0.837 0.837 0.837 AUTHOR ::::EMDATABANK.org::::EMD-14794:::: Unsharpened/unmodified map emd_14794_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 588 588 588 0 0 0 588 588 588 492.156 492.156 492.156 90.0 90.0 90.0 X Y Z -2.7030401 4.726406 0.0015346687 0.39093083 0.837 0.837 0.837 AUTHOR ::::EMDATABANK.org::::EMD-14794:::: EM_half_map_A emd_14794_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 588 588 588 0 0 0 588 588 588 492.156 492.156 492.156 90.0 90.0 90.0 X Y Z -2.7663877 3.8638272 0.0015320118 0.39074638 0.837 0.837 0.837 AUTHOR ::::EMDATABANK.org::::EMD-14794:::: EM_half_map_B