2024-10-23 REL PDBe PDBe PDBe 2022-03-25 2022-09-28 2022-09-28 2024-10-23 German Research Foundation (DFG) VI 778/2-1 Germany Na+ - translocating ferredoxin: NAD+ reductase (Rnf) of C. tetanomorphum Ermler U Vitt S Buckel W Rnf, flavin, iron-sulfur cluster, sodium ion translocation, anaerobic energy metabolism, oxidoreductase, electron transport, redox-coupled sodium pump, FLAVOPROTEIN Vitt S Prinz S Eisinger M Ermler U Buckel W Purification and structural characterization of the Na + -translocating ferredoxin: NAD + reductase (Rnf) complex of Clostridium tetanomorphum. Nat Commun UK 13 6315 6315 2022 36274063 doi:10.1038/s41467-022-34007-z 2041-1723 7zc6 FULLOVERLAP Na+ -translocating ferredoxin: NAD+ reductase (Rnf) Na+ -translocating ferredoxin: NAD+ reductase (Rnf) 0 1 2 3 4 5 6 Clostridium tetanomorphum 0.165 RnfA Clostridium tetanomorphum 0.020594849999999998 1 Clostridium tetanomorphum LEVO MSIFTIFISALLVNNFVLSRFLGICPFLGVSKKVETATGMGAAVTFVMALAAIMTFLVERFILIPLNIQYLSTLAFILVI ASLVQFVEMVIKKVSPDLYKALGIYLPLITTNCAVLGMAVINSNEKYNLIQSIINSVGAALGFTLALVLLAGIREKMETN EYIPEALKGLPITLVTAGLMAIAFLGFQGLI RnfB Clostridium tetanomorphum 0.028008583999999996 1 Clostridium tetanomorphum LEVO MEGLLFPVLSLGGLGVVFGLLLGYASKKFAVEVDERVPMVRAALPGANCGGCGFAGCDAYADAVVNAGAKPNGCPVGGAA CAAKIAEIMGVVVDSSEPKKAYVKCQGTCDKAKEKYEYYGAMTCVDAANIPGAGSKTCGFGCLGLGSCVQVCAFDAIHVE NGIAVVDEEACTGCGACVSICPKSVIELTPMSKKVRISCNSHDKGIEVKNACSVGCLSCGLCVRNCPSEAITMVNNLPVI DYDKCTQCGVCVGKCPTKAIVNLNTNVSKEASNN RnfC Clostridium tetanomorphum 0.04716473399999999 1 Clostridium tetanomorphum LEVO MELLTFKNGVHPPHGKHYTENKPIEEYLPKGDIVIPMSQHIGAPAEPIVKKGDRVLVGQKIGEAKGFVSANIHASVSGTV KNVAPVTLFNGVKSTAVIIENDGQYEEIETEKRDYTKLSNEEIINIIKEAGIVGMGGATFPTHVKLAPPPDKNIDSIVVN AAECEPYLTCDHRMMLEKTNEIVEGLKIVLKLFPKATGYIGIEDNKMNAIKAMQEAVKNIANIEVKAVKTKYPQGAEKQL IYAITKREVPSGGLPADAGCIVQNVDTIYEIYNAVVNGKPLTSRVVTVTGDAIKEPKNLRFKIGTSVRELVEAAGGFAEE PLKVISGGPMMGMAMYSLDVPSTKGTSGVLCLTKKVAEIEEESNCINCGKCVQVCPMNLMPTKLATASAVSNLDMFNEFS GRDCIECGCCSFVCPARRHLLQRIRSGKKAVSKKK RnfD Clostridium tetanomorphum 0.032990891 1 Clostridium tetanomorphum LEVO MSETTMYTVSSSPHIRAKDTTQSIMRDVVIALLPATIAGVYFFKLQGLLVILASVLSCVVAEYIWQKASKKKVTVGDYSA VVTGLLLAFNVPASIPLWIPVVGGFFAIIVVKQFFGGLGQNIVNPALAARAFLLASWPVQMTSWTLDGVTTATPLAILKG NEATGAAAPDLMSVFIGHVGGCIGETSALALLIGGAYLFYKHIIDWRIPVSFIGTTFIFTAIAGRGSSPVYELFAGGLML GAIFMATDYATSPITPLGRIIFGVGCGVITSLIRIFGGYPEGVSYSILVMNLFVPLIERWTAPKIFGKVK RnfE Clostridium tetanomorphum 0.021213398 1 Clostridium tetanomorphum LEVO MGVVSERLYNGIVKENATFVQVLGMCPTLAVTTSAINGIGMGLSATVVLIGSNVVISLLKKVIPDEIRIPAYITVIATLV TVLQFLLQAYLPDLNKSLGIFIPLIVVNCIILGRAEAYANKNSVGASFFDGLGMGLGFTVSLAALGIIREFLGTGKVFGA QITPDAFQPALIMILAPGGFFTLGILMAILNQRKLKKAKAK RnfG Clostridium tetanomorphum 0.019502664 1 Clostridium tetanomorphum LEVO MKKVSSFKLGMVLLLIAAVCGLILGGVNQVTAEPIAIQNKKTLDEANKAILPEASEFAEKTDIKGEGIVLGVTEGKSGSD LKGYTIKVAPKGYAGAIEMMVGVSTEGKVTGIKILNHAETPGLGANATDPKFSGQYANKPAKELKVVKGAASGEDEIVAI TGATITSKAVTLGVNEAIKFYDTKLKGGK FE (III) ION 5.5845e-05 1 FE IRON/SULFUR CLUSTER 0.00035163999999999996 7 SF4 FLAVIN MONONUCLEOTIDE 0.00045634399999999997 3 FMN RIBOFLAVIN 0.00037636399999999996 1 RBF singleParticle particle 7.5 C-flat-2/1 COPPER 300 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 1.2 2.1 105000.0 GATAN K3 BIOQUANTUM (6k x 4k) 40.0 1 4.27 FSC 0.143 CUT-OFF 88423 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_14622.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 240 240 240 0 0 0 240 240 240 200.88 200.88 200.88 90.0 90.0 90.0 X Y Z -0.049992055 0.14030054 0.000027384343 0.0027154044 0.837 0.837 0.837 0.0115 AUTHOR emd_14622_msk_1.map emd_14622_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 240 240 240 0 0 0 240 240 240 200.88005 200.88005 200.88005 90.0 90.0 90.0 X Y Z -0.015937515 0.048736338 0.000027654134 0.0024426545 0.8370002 0.8370002 0.8370002 AUTHOR emd_14622_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 240 240 240 0 0 0 240 240 240 200.88005 200.88005 200.88005 90.0 90.0 90.0 X Y Z -0.015701253 0.0470247 0.000027578993 0.0024475201 0.8370002 0.8370002 0.8370002 AUTHOR