REL PDBe PDBe PDBe 2007-08-31 2010-01-12 2010-01-12 2012-10-10 Cryo-EM study of the Spinach chloroplast ribosome reveals the structural and functional roles of plastid-specific ribosomal proteins Sharma MR Wilson DN Datta PP Barat C Schluenzen F Fucini P Agrawal RK Sharma MR Wilson DN Datta PP Barat C Schluenzen F Fucini P Agrawal RK Cryo-EM study of the spinach chloroplast ribosome reveals the structural and functional roles of plastid-specific ribosomal proteins. PROC.NAT.ACAD.SCI.USA 104 19315 19320 2007 18042701 doi:10.1073/pnas.0709856104 4v61 FULLOVERLAP Spinacea oleracea chloroplast 70S ribosome Spinacea oleracea chloroplast 70S ribosome 1 2.5 Spinach Chloroplast 70S Ribosome
The SSU 30S has PSRP1,2,3, and 4 identified. LSU 50S did not have PRPL25 and PRPL30 density present. pRRF (plastid ribosome recycling factor)is tightly bound to LSU 50S subunit. One of the two PSRPs on the LSU 50S subunit is identified.
false Spinacia oleracea Spinach 2.5 ribosome-eukaryote: ALL singleParticle particle 7.6
10mM Tris-HCL pH 7.6, 50mM KCL, 10mM MgOAc, 7mM 2-ME
quantifoil 300 mesh copper grid
 ETHANE 100 277 HOMEMADE PLUNGER
Vitrification instrument: Cryo-plunger
5 microliters applied to the grid then blotted for 3 seconds with Whatman number 1 filter paper before plunging FEI TECNAI F20 FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 200 1.4 4.4 50000.0 50760.0 OTHER 93 objective lens astigmatism was corrected at 250K times magnification KODAK SO-163 FILM ZEISS SCAI 14 164 20 12. Cryo Transfer Holder
Initially, 192,133 images were selected using automated particle picking program
each micrograph
 C1 OTHER 9.4 FSC 0.5 CUT-OFF SPIDER 86370 83 emd_1417.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 130 130 130 -65 -65 -65 130 130 130 358.8 358.8 358.8 90 90 90 X Y Z -126.152000000000001 262.374000000000024 3.28534 26.942900000000002 2.76 2.76 2.76 49.0 Spinach Chloroplast 70S ribosome
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 1DD5 RIGID BODY FIT O
Protocol: Rigid Body. Docking of crystallographic structures in 3D map was performed using program O