2024-11-20 REL PDBe PDBe PDBe 2021-12-20 2022-04-13 2022-04-13 2024-11-20 Medical Research Council (MRC, United Kingdom) MR/L009609/1 United Kingdom Medical Research Council (MRC, United Kingdom) MC_UP_1201/15 United Kingdom National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) 1R01-GM135550 United Kingdom Wellcome Trust 206171/Z/17/Z United Kingdom Wellcome Trust 202905/Z/16/Z United Kingdom Cryo-EM structure of human full-length extrasynaptic alpha4beta3delta GABA(A)R in complex with GABA, histamine and nanobody Nb25 in a pre-open/closed state Sente A Desai R pentameric ligand-gated ion channel, neurotransmitter receptor, GABA receptor, MEMBRANE PROTEIN Sente A Desai R Naydenova K Malinauskas T Jounaidi Y Miehling J Zhou X Masiulis S Hardwick SW Chirgadze DY Miller KW Aricescu AR Differential assembly diversifies GABA A receptor structures and signalling. Nature UK 604 190 194 2022 35355020 doi:10.1038/s41586-022-04517-3 1476-4687 0006 NATUAS 7qn9 FULLOVERLAP Human full-length extrasynaptic alpha4beta3delta GABA(A)R in complex with histamine and nanobody Nb25 Human full-length extrasynaptic alpha4beta3delta GABA(A)R in complex with histamine and nanobody Nb25 0 1 2 3 4 Homo sapiens Gamma-aminobutyric acid receptor subunit alpha-4 Homo sapiens 0.061696047 1 Homo sapiens LEVO MVSAKKVPAIALSAGVSFALLRFLCLAVCLNESPGQNQKEEKLCTENFTRILDSLLDGYDNRLRPGFGGPVTEVKTDIYV TSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTI LYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMD WFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSKPPQEVPAAPVQREKHPEAPLQNTNANLNMRKRTNALVHSESDV GNRTEVGNHSSKSSTVVQESSKGTPRSYLASSPNPFSRANAAETISAARALPSASPTSIRTGYMPRKASVGSASTRHVFG SRLQRIKTTVNTIGATGKLSATPPPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVVYLSKDTMEKSESLM P48169 Gamma-aminobutyric acid receptor subunit beta-3 Homo sapiens 0.054180347999999996 3 Homo sapiens LEVO MWGLAGGRLFGIFSAPVLVAVVCCAQSVNDPGNMSFVKETVDKLLKGYDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNM DYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAA CMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSIVEHRLVSRNVVFATGAYPRLSLSFRLK RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLA LLEYAFVNYIFFGRGPQRQKKLAEKTAKAKNDRSKSESNRVDAHGNILLTSLEVHNEMNEVSGGIGDTRNSAISFDNSGI QYRKQSMPREGHGRFLGDRSLPHKKTHLRRRSSQLKIKIPDLTDVNAIDRWSRIVFPFTFSLFNLVYWLYYVN P28472 Gamma-aminobutyric acid receptor subunit delta Homo sapiens 0.052437925999999996 1 Homo sapiens LEVO MDAPARLLAPLLLLCAQQLRGTRAMNDIGDYVGSNLEISWLPNLDGLIAGYARNFRPGIGGPPVNVALALEVASIDHISE ANMEYTMTVFLHQSWRDSRLSYNHTNETLGLDSRFVDKLWLPDTFIVNAKSAWFHDVTVENKLIRLQPDGVILYSIRITS TVACDMDLAKYPMDEQECMLDLESYGYSSEDIVYYWSESQEHIHGLDKLQLAQFTITSYRFTTELMNFKSAGQFPRLSLH FHLRRNRGVYIIQSYMPSVLLVAMSWVSFWISQAAVPARVSLGITTVLTMTTLMVSARSSLPRASAIKALDVYFWICYVF VFAALVEYAFAHFNADYRKKQKAKVKVSRPRAEMDVRNAIVLFSLSAAGVTQELAISRRQRRVPGNLMGSYRSVGVETGE TKKEGAARSGGQGGIRARLRPIDADTIDIYARAVFPAAFAAVNVIYWAAYAMGGSGGSGGSGKTETSQVAPA O14764 Nanobody Nb25 Homo sapiens 0.013341740999999999 2 Homo sapiens LEVO QVQLVESGGGLVQGSLRLSCAASGHTFNYPIMGWFRQAPGKEREFVGAISWSGGSTSYADSVKDRFTISRDNAKNTVYLE MNNLKPEDTAVYYCAAKGRYSGGLYYPTNYDYWGQGTQVTV 2-acetamido-2-deoxy-beta-D-glucopyranose 0.000221208 2 NAG HISTAMINE 0.000111145 3 HSM HEXADECANE 0.000226441 1 R16 DECANE 0.000142282 1 D10 singleParticle particle 7.6 300.0 NaCl Sodium chloride 50.0 HEPES ETHANE 95 287 LEICA PLUNGER FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 50.0 2.7 0.7000000000000001 2.1 130000.0 NITROGEN GIF Bioquantum 20 GATAN K3 (6k x 4k) 40.0 1
AB INITIO MODEL
 2.9 FSC 0.143 CUT-OFF RELION 3.1 92694 MAXIMUM LIKELIHOOD RELION 3.1 MAXIMUM LIKELIHOOD RELION 3.1 RELION 3.1 emd_14071.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 290 290 290 0 0 0 290 290 290 259.84 259.84 259.84 90.0 90.0 90.0 X Y Z -0.031287134 0.08644161 -0.00007518729 0.0029200793 0.89599997 0.89599997 0.89599997 0.008 AUTHOR AB INITIO MODEL