2025-01-29 REL PDBe PDBe PDBe 2021-12-01 2021-12-22 2021-12-22 2025-01-29 Swiss National Science Foundation 310030_185235 Switzerland Medical Research Council (MRC, United Kingdom) MC_UP_1201/6 United Kingdom Focused refined map of the TPR lobe of the Anaphase-promoting complex/cyclosome (APC/C) Hoefler A Yu J Chang L Zhang Z Yang J Boland A Barford D APC/C, cyclosome, Cdc20, Cdh1, ubiquitination, Emi1, mitosis, Cell cycle Hofler A Yu J Yang J Zhang Z Chang L McLaughlin SH Grime GW Garman EF Boland A Barford D Cryo-EM structures of apo-APC/C and APC/C CDH1:EMI1 complexes provide insights into APC/C regulation. Nat Commun UK 15 10074 10074 2024 39567505 doi:10.1038/s41467-024-54398-5 2041-1723 EMD-13931 other EM volume EMD-13932 other EM volume Anaphase-promoting complex (APC/C) bound to co-activator Cdh1 Anaphase-promoting complex (APC/C) bound to co-activator Cdh1 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 Homo sapiens 1.2 singleParticle particle 0.1 8.0 20.0 Hepes 2-[4-(2-hydroxyethyl)piperazin-1-yl]ethanesulfonic acid 200.0 NaCl sodium chloride 2.0 DTT Dithiothreitol Quantifoil R2/2 COPPER CARBON CONTINUOUS 50.0 PLASMA CLEANING OTHER ETHANE 100 277.15 FEI VITROBOT MARK III FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 OTHER NITROGEN FEI FALCON III (4k x 4k) COUNTING 4096 4096 8297 40.0 1 1800000
The particles were automatically selected
 2.85 FSC 0.143 CUT-OFF cryoSPARC 2.14.2 Local refinement 364331 MAXIMUM LIKELIHOOD cryoSPARC 2.14.2 MAXIMUM LIKELIHOOD cryoSPARC 2.14.2 8 RELION 3.1 beta emd_13933.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 360 360 360 0 0 0 360 360 360 385.2 385.2 385.2 90.0 90.0 90.0 X Y Z -0.03774307 1.9113202 0.0023139876 0.033902943 1.07 1.07 1.07 0.085 AUTHOR Focused refined map (sharpened with deepEMhancer) of the TPR lobe of the Anaphase-promoting complex/cyclosome (APC/C) 4UI9 PDB experimental model RIGID BODY FIT REAL 80.0 emd_13933_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 360 360 360 0 0 0 360 360 360 385.2 385.2 385.2 90.0 90.0 90.0 X Y Z -0.9336167 2.4436104 0.002904753 0.09006674 1.07 1.07 1.07 AUTHOR Focused refined map (unsharpened) of the TPR lobe of the Anaphase-promoting complex/cyclosome (APC/C) emd_13933_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 360 360 360 0 0 0 360 360 360 385.2 385.2 385.2 90.0 90.0 90.0 X Y Z -1.0083032 2.5942667 0.005293872 0.12996876 1.07 1.07 1.07 AUTHOR Half map A of the TPR lobe of the Anaphase-promoting complex/cyclosome (APC/C) emd_13933_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 360 360 360 0 0 0 360 360 360 385.2 385.2 385.2 90.0 90.0 90.0 X Y Z -1.0120585 2.675482 0.0052839895 0.13032137 1.07 1.07 1.07 AUTHOR Half map B of the TPR lobe of the Anaphase-promoting complex/cyclosome (APC/C)