<emd xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" emdb_id="EMD-1333" version="3.0.1.1" xsi:schemaLocation="https://github.com/emdb-empiar/emdb-schemas/blob/master/v3/v3_0_1_1/emdb_relaxed.xsd">
   <admin>
      <current_status>
         <code>REL</code>
         <processing_site>PDBe</processing_site>
      </current_status>
      <sites>
         <deposition>PDBe</deposition>
         <last_processing>PDBe</last_processing>
      </sites>
      <key_dates>
         <deposition>2007-03-06</deposition>
         <header_release>2007-03-06</header_release>
         <map_release>2007-07-18</map_release>
         <update>2012-10-24</update>
      </key_dates>
      <title>The structures of bacteriophages K1E and K1-5 explain processive degradation of polysaccharide capsules and evolution of new host specificities.</title>
      <authors_list>
         <author>Leiman PG</author>
         <author>Battisti AJ</author>
         <author>Bowman VD</author>
         <author>Stummeyer K</author>
         <author>Muhlenhoff M</author>
         <author>Gerardy-Schahn R</author>
         <author>Scholl D</author>
         <author>Molineux IJ</author>
      </authors_list>
      <keywords>
         </keywords>
   </admin>
   <crossreferences>
      <citation_list>
         <primary_citation>
            <journal_citation published="true">
               <author order="1">Leiman PG</author>
               <author order="2">Battisti AJ</author>
               <author order="3">Bowman VD</author>
               <author order="4">Stummeyer K</author>
               <author order="5">Muhlenhoff M</author>
               <author order="6">Gerardy-Schahn R</author>
               <author order="7">Scholl D</author>
               <author order="8">Molineux IJ</author>
               <title>The structures of bacteriophages K1E and K1-5 explain processive degradation of polysaccharide capsules and evolution of new host specificities.</title>
               <journal>J.MOL.BIOL.</journal>
               <volume>371</volume>
               <first_page>836</first_page>
               <last_page>849</last_page>
               <year>2007</year>
               <external_references type="PUBMED">17585937</external_references>
               <external_references type="DOI">doi:10.1016/j.jmb.2007.05.083</external_references>
            </journal_citation>
         </primary_citation>
      </citation_list>
   </crossreferences>
   <sample>
      <name>Sixfold averaged tail of bacteriophage K1E</name>
      <supramolecule_list>
         <sample_supramolecule supramolecule_id="1000">
            <name>Sixfold averaged tail of bacteriophage K1E</name>
            <number_unique_components>1</number_unique_components>
            <molecular_weight>
               <experimental units="MDa">8</experimental>
               <theoretical units="MDa">8</theoretical>
               <method>Primary sequence</method>
            </molecular_weight>
         </sample_supramolecule>
         <virus_supramolecule supramolecule_id="1">
            <name synonym="phage K1E tail">Enterobacteria phage K1E</name>
            <details>sixfold averaged</details>
            <sci_species_name ncbi="344022">Enterobacteria phage K1E</sci_species_name>
            <natural_host database="NCBI">
               <organism ncbi="562">Escherichia coli</organism>
               <synonym_organism>BACTERIA(EUBACTERIA)</synonym_organism>
            </natural_host>
            <host_system database="NCBI">
               </host_system>
            <molecular_weight>
               <experimental units="MDa">8</experimental>
               <theoretical units="MDa">8</theoretical>
            </molecular_weight>
            <virus_type>VIRION</virus_type>
            <virus_isolate>SPECIES</virus_isolate>
            <virus_enveloped>false</virus_enveloped>
            <virus_empty>false</virus_empty>
            <syn_species_name>phage K1E tail</syn_species_name>
         </virus_supramolecule>
      </supramolecule_list>
   </sample>
   <structure_determination_list>
      <structure_determination structure_determination_id="1">
         <method>singleParticle</method>
         <aggregation_state>particle</aggregation_state>
         <specimen_preparation_list>
            <single_particle_preparation preparation_id="1">
               <concentration units="mg/mL">1</concentration>
               <buffer>
                  <ph>7.5</ph>
                  <details>50 mM Tris HCl pH 7.5, 100 mM NaCl,  8 mM MgSO4</details>
               </buffer>
               <staining>
                  <type>NEGATIVE</type>
                  <details>none</details>
               </staining>
               <grid>
                  <details>quantifoil grid</details>
               </grid>
               <vitrification>
                  <cryogen_name>ETHANE</cryogen_name>
                  <chamber_humidity units="percentage">80</chamber_humidity>
                  <chamber_temperature units="K">300</chamber_temperature>
                  <instrument>OTHER</instrument>
                  <details>Vitrification instrument: Vitrobot</details>
               </vitrification>
            </single_particle_preparation>
         </specimen_preparation_list>
         <microscopy_list>
            <single_particle_microscopy microscopy_id="1">
               <microscope>FEI/PHILIPS CM300FEG/T</microscope>
               <illumination_mode>SPOT SCAN</illumination_mode>
               <imaging_mode>BRIGHT FIELD</imaging_mode>
               <electron_source>FIELD EMISSION GUN</electron_source>
               <acceleration_voltage units="kV">300</acceleration_voltage>
               <nominal_cs units="mm">2.0</nominal_cs>
               <nominal_defocus_min units="&#181;m">0.7</nominal_defocus_min>
               <nominal_defocus_max units="&#181;m">3.3</nominal_defocus_max>
               <nominal_magnification>45000.0</nominal_magnification>
               <calibrated_magnification>47000.0</calibrated_magnification>
               <specimen_holder_model>GATAN LIQUID NITROGEN</specimen_holder_model>
               <temperature>
                  <temperature_average units="K">100</temperature_average>
               </temperature>
               <date>2005-05-10</date>
               <image_recording_list>
                  <image_recording>
                     <film_or_detector_model category="FILM">KODAK SO-163 FILM</film_or_detector_model>
                     <digitization_details>
                        <scanner>ZEISS SCAI</scanner>
                        <sampling_interval units="&#181;m">7</sampling_interval>
                     </digitization_details>
                     <number_real_images>122</number_real_images>
                     <average_electron_dose_per_image units="e/&#8491;^2">25</average_electron_dose_per_image>
                     <bits_per_pixel>12.</bits_per_pixel>
                  </image_recording>
               </image_recording_list>
               <specimen_holder>Side entry liquid nitrogen-cooled cryo specimen holder</specimen_holder>
            </single_particle_microscopy>
         </microscopy_list>
         <singleparticle_processing image_processing_id="1">
            <ctf_correction>
               <details>Each particle</details>
            </ctf_correction>
            <final_reconstruction>
               <applied_symmetry>
                  <point_group>C6</point_group>
               </applied_symmetry>
               <algorithm>OTHER</algorithm>
               <resolution res_type="BY AUTHOR" units="&#8491;">16.4</resolution>
               <resolution_method>OTHER</resolution_method>
               <software_list>
                  <software>
                     <name>Spider</name>
                  </software>
               </software_list>
               <number_images_used>6105</number_images_used>
            </final_reconstruction>
         </singleparticle_processing>
      </structure_determination>
   </structure_determination_list>
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      <file>emd_1333.map.gz</file>
      <symmetry>
         <space_group>1</space_group>
      </symmetry>
      <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
      <dimensions>
         <col>176</col>
         <row>176</row>
         <sec>176</sec>
      </dimensions>
      <origin>
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         <row>-88</row>
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      <cell>
         <a units="&#8491;">524.48</a>
         <b units="&#8491;">524.48</b>
         <c units="&#8491;">524.48</c>
         <alpha units="deg">90</alpha>
         <beta units="deg">90</beta>
         <gamma units="deg">90</gamma>
      </cell>
      <axis_order>
         <fast>X</fast>
         <medium>Y</medium>
         <slow>Z</slow>
      </axis_order>
      <statistics>
         <minimum>-8.551159999999999</minimum>
         <maximum>9.72964</maximum>
         <average>0.000000000325921</average>
         <std>1.0</std>
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         <x units="&#8491;">2.98</x>
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      <contour_list>
         <contour primary="true">
            <level>1.92</level>
         </contour>
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      <annotation_details>Sixfold averaged tail of bacteriophage K1E</annotation_details>
      <details>::::EMDATABANK.org::::EMD-1333::::</details>
   </map>
</emd>