2024-07-17 REL PDBe PDBe PDBe 2021-07-15 2022-09-21 2022-09-21 2024-07-17 Not funded 25541 Austria Complex I from E. coli, DDM-purified, Apo, Resting state Kravchuk V Kampjut D Sazanov L Complex I, NADH, Quinone, PROTON TRANSPORT, MEMBRANE PROTEIN Kravchuk V Petrova O Kampjut D Wojciechowska-Bason A Breese Z Sazanov L A universal coupling mechanism of respiratory complex I. Nature UK 609 808 814 2022 36104567 doi:10.1038/s41586-022-05199-7 1476-4687 0006 NATUAS EMD-13214 other EM volume EMD-13216 other EM volume EMD-13217 other EM volume EMD-13222 other EM volume EMD-13235 other EM volume EMD-13236 other EM volume EMD-13237 other EM volume EMD-13238 other EM volume EMD-13239 other EM volume EMD-13240 other EM volume 7p62 FULLOVERLAP Complex I Complex I 0 1 2 3 4 5 6 7 8 9 10 11 12 13 Escherichia coli BL21-DE3 NADH-quinone oxidoreductase subunit F Escherichia coli BL21(DE3) DE3 0.048879811999999995 1 LEVO MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTGLSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDE SMNIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGAWGKPTCVNNVETLCNVPAILANGVEWYQNIS KSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILEDYAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSR LGTALAMAVDHEINMVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLGPGKTFCAH APGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLK A0A140N9Z7 7.1.1.- NADH dehydrogenase I subunit E Escherichia coli BL21(DE3) DE3 0.01738977 1 LEVO AFELSAAEREAIEHEMHHYEDPRAASIEALKIVQKQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIR YCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPELLERYK A0A140N9K4 NADH-quinone oxidoreductase Escherichia coli BL21(DE3) DE3 0.099961672 1 LEVO ATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDD EEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRYY KDYAGGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRKWDMQFAPSICQQCSIGCNISPGE RYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLKDRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRAS VESNFALRELVGEENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALAVRQAVKGKA REMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAPVEDQARLGFAIAHALDNSAPAVDGIEPELQS KIDVIVQALAGAKKPLIISGTNAGSLEVIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRA DAVVVLENDLHRHASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNEGRAQRFFQVYDPAYYDS KTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPELAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISV HEPRQPQDIDTMFTFSMEGNNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTSVPA RFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYIKLNPADAAKLGVNAGTRVSFSYDGNTVTLPVEIAEGLTAGQ VGLPMGMSGIAPVLAGAHLEDLKEA A0A140N9P3 7.1.1.- NADH-quinone oxidoreductase subunit C/D Escherichia coli BL21(DE3) B / BL21-DE3 0.0688105 1 LEVO MVNNMTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGM DERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGE EIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHL LYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQ NTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRI LEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTR IRTPSYAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR A0A140N745 7.1.1.- NADH-quinone oxidoreductase subunit B Escherichia coli BL21(DE3) DE3 0.025081809 1 LEVO MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVAR FGAEVLRASPRQADLMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPDEI A0A140N560 7.1.1.- NADH-quinone oxidoreductase subunit I Escherichia coli BL21(DE3) DE3 0.016334743999999998 1 LEVO PVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL TPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDGKDKGEAENEAKPIDVKSLLP A0A140N885 7.1.1.- Proton-translocating NADH-quinone oxidoreductase, chain L Escherichia coli BL21(DE3) B / BL21-DE3 0.066513633 1 LEVO MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQTYSQPLWTWMSVGDFNIGFNLV LDGLSLTMLSVVTGVGFLIHMYASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTD PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWATLMLLGGAVGKSAQLPLQTWLA DAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMF LALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKD EILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKGVTHSLPLIVLLILSTFVGALIVPPLQGVLP QTTELAHGSMLTLEITSGVVAVVGILLAAWLWLGKRTLVTSIANSAPGRLLSTWWYNAWGFDWLYDKVFVKPFLGIAWLL KRDPLNSMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVLR A0A140N7P6 NADH dehydrogenase I subunit M Escherichia coli BL21(DE3) DE3 0.056002473 1 LEVO MLLPWLILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIH LAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK ASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPL HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSV SHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPG TGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGF YPQPILDTSHSAIGNIQQWFVNSV A0A140N571 NADH-quinone oxidoreductase subunit N Escherichia coli BL21(DE3) DE3 0.05207267199999999 1 LEVO MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIGLNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLV LLASLATCTFAYPWLEGYNDNKDEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYT ILSAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGLMIVGLGFKLSLVPFHLWTPDVYQGAPAPVST FLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAIIAFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGE MSMEAVGVYLAGYLFSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGFIGKFYVLA VGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQPGRDAPSNWQYSAGGIVVLISALLVLVLGVWPQPLISIVRL AMPLM A0A140N755 7.1.1.- NADH-quinone oxidoreductase subunit H Escherichia coli BL21(DE3) B / BL21-DE3 0.036240921999999995 1 LEVO MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDR VIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL GLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAEQELADGYHIEYSGMKFGLFFVG EYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTAFFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVI LWQAQ A0A140N5X6 7.1.1.- NADH-quinone oxidoreductase subunit A Escherichia coli BL21(DE3) B / BL21-DE3 0.016474283 1 LEVO MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARARSKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDV EALYLFAWSTSIRESGWVGFVEAAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR A0A140N7N4 7.1.1.- NADH-quinone oxidoreductase subunit K Escherichia coli BL21(DE3) DE3 0.010852961 1 LEVO MIPLQHGLILAAILFVLGLTGLVIRRNLLFMLIGLEIMINASALAFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALL LQLHRRRQNLNIDSVSEMRG C5W716 7.1.1.- NADH-quinone oxidoreductase subunit J Escherichia coli BL21(DE3) DE3 0.018834361 1 LEVO MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSE IEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR EERAGEVLSNRKDDS A0A140N7W8 7.1.1.- IRON/SULFUR CLUSTER 0.00035163999999999996 7 SF4 FLAVIN MONONUCLEOTIDE 0.00045634399999999997 1 FMN FE2/S2 (INORGANIC) CLUSTER 0.00017581999999999998 2 FES CALCIUM ION 4.0078e-05 1 CA 1,2-Distearoyl-sn-glycerophosphoethanolamine 0.000748065 2 3PE singleParticle particle 10 6.0 20.0 C6H13NO4S MES 2.0 CaCl2 calcium chloride 250.0 NaCl sodium chloride 0.4 C24H46O11 DDM Quantifoil R0.6/1 COPPER GLOW DISCHARGE ETHANE 100 277 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 1.0 2.0 130000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN FEI FALCON III (4k x 4k) INTEGRATING 1 3658 89.0 1 756083 4HEA 3 C1 FOURIER SPACE 3.6 FSC 0.143 CUT-OFF RELION 120909 MAXIMUM LIKELIHOOD RELION MAXIMUM LIKELIHOOD RELION RELION emd_13215.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 231 199 147 0 0 0 147 199 231 155.967 211.13899 245.091 90.0 90.0 90.0 Z Y X -0.0668954 0.9713062 0.0086032245 0.034424156 1.061 1.061 1.061 0.085 AUTHOR 4HEA PDB experimental model 3RKO PDB experimental model FLEXIBLE FIT ML REAL emd_13215_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 504 504 504 0 0 0 504 504 504 534.744 534.744 534.744 90.0 90.0 90.0 X Y Z -0.3248714 1.0392356 0.000082468374 0.00814823 1.061 1.061 1.061 AUTHOR emd_13215_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 504 504 504 0 0 0 504 504 504 534.744 534.744 534.744 90.0 90.0 90.0 X Y Z -0.26266068 0.54179436 0.00008782493 0.007767389 1.061 1.061 1.061 AUTHOR DDM Apo MD focused