2026-09-02 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY COORDINATE_REPLACEMENT AUTHOR STRUCTURE_SUMMARY atom_site audit_author chem_comp citation_author em_software ndb_struct_na_base_pair ndb_struct_na_base_pair_step pdbx_contact_author pdbx_entity_instance_feature pdbx_initial_refinement_model pdbx_nonpoly_scheme pdbx_struct_conn_angle pdbx_struct_sheet_hbond pdbx_validate_close_contact pdbx_validate_torsion struct_conf struct_conn struct_mon_prot_cis struct_sheet struct_sheet_order struct_sheet_range _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.occupancy _chem_comp.pdbx_synonyms _em_software.category _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.hbond_type_12 _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.comp_id _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.value _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.dist _pdbx_validate_close_contact.label_alt_id_2 _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_mon_prot_cis.pdbx_omega_angle _struct_sheet.number_strands DATABASE_REFERENCES citation citation_author _citation.country _citation.journal_abbrev _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_volume _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.title _citation.year REFINEMENT_DESCRIPTION atom_site chem_comp_atom chem_comp_bond em_3d_fitting_list pdbx_validate_main_chain_plane pdbx_validate_rmsd_angle pdbx_validate_torsion struct_conn _atom_site.auth_atom_id _atom_site.label_atom_id _em_3d_fitting_list.accession_code _em_3d_fitting_list.initial_refinement_model_id _em_3d_fitting_list.source_name _em_3d_fitting_list.type _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_label_atom_id STRUCTURE_SUMMARY chem_comp _chem_comp.pdbx_synonyms DATA_COLLECTION chem_comp_atom chem_comp_bond _chem_comp_atom.atom_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.value_order REMEDIATION REPOSITORY Metalloprotein remediation STRUCTURE_SUMMARY em_admin pdbx_entry_details pdbx_modification_feature pdbx_nonpoly_atom_coordination pdbx_nonpoly_atom_coordination_sphere pdbx_nonpoly_atom_coordination_sphere_order pdbx_struct_conn_angle struct_conn _em_admin.last_update _pdbx_entry_details.has_protein_modification EXPERIMENTAL_SUMMARY em_admin _em_admin.last_update PDBe PDBe 2021-07-05 2022-07-27 2022-07-27 2026-09-02 European Research Council (ERC) ERC-2018-StG-805230 Sweden The Swedish Foundation for Strategic Research FFL15:0325 Sweden Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin Itoh Y Khawaja A Rorbach J Amunts A Initiation factor 3, translation, antibiotic, streptomycin, RIBOSOME Itoh Y Singh V Khawaja A Naschberger A Nguyen MD Rorbach J Amunts A Structure of the mitoribosomal small subunit with streptomycin reveals Fe-S clusters and physiological molecules. Elife US 11 2022 36480258 doi:10.7554/eLife.77460 2050-084X 7p2e FULLOVERLAP EMDB EMD-13170 associated EM volume
Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin
 Small subunit of human mitochondrial ribosome in complex with initiation factor 3 Small subunit of human mitochondrial ribosome in complex with initiation factor 3 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 Small subunit of human mitochondrial ribosome in complex 1 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 Homo sapiens Translation initiation factor IF-3, mitochondrial 1 32 Homo sapiens 12S mitochondrial rRNA Homo sapiens 0.306547531 1 AAUAGGUUUGGUCCUAGCCUUUCUAUUAGCUCUUAGUAAGAUUACACAUGCAAGCAUCCCCGUUCCAGUGAGUUCACCCU CUAAAUCACCACGAUCAAAAGGGACAAGCAUCAAGCACGCAGCAAUGCAGCUCAAAACGCUUAGCCUAGCCACACCCCCA CGGGAAACAGCAGUGAUUAACCUUUAGCAAUAAACGAAAGUUUAACUAAGCUAUACUAACCCCAGGGUUGGUCAAUUUCG UGCCAGCCACCGCGGUCACACGAUUAACCCAAGUCAAUAGAAGCCGGCGUAAAGAGUGUUUUAGAUCACCCCCUCCCCAA UAAAGCUAAAACUCACCUGAGUUGUAAAAAACUCCAGUUGACACAAAAUAGACUACGAAAGUGGCUUUAACAUAUCUGAA CACACAAUAGCUAAGACCCAAACUGGGA(5MU)UAGAUACCCCACUAUGCUUAGCCCUAAACCUCAACAGUUAAAUCAAC AAAACUGCUCGCCAGAACACUACGAGCCACAGCUUAAAACUCAAAGGACCUGGCGGUGCUUCAUAUCCCUCUAGAGGAGC CUGUUCUGUAAUCGAUAAACCCCGAUCAACCUCACCACCUCUUGCUCAGCCUAUAUACCGCCAUCUUCAGCAAACCCUGA UGAAGGCUACAAAGUAAGCGCAAGUACCCACGUAAAGACGUUAGGUCAAGGUGUAGCCCAUGAGGUGGCAAGAAAUGGGC UACAUUUUCUACCCCAGAAAACUACGAUAGCCCUUAUGAAACUUAAGGGUCGAAGGUGGAUUUAGCAGUAAACUGAGAGU AGAGUGCUUAGUUGAACAGGGCCCUGAAGCGCGUACACACCG(B8T)C(5MC)GUCACCCUCCUCAAGUAUACUUCAAAG GACAUUUAACUAAAACCCCUACGCAUUUAUAUAGAGGAGACAAGUCGUAACAUGGUAAGUGUACUGG(MA6)(MA6)AGU GCACUUGGACGAACC 28S ribosomal protein S2, mitochondrial Homo sapiens 0.033298237999999994 1 LEVO MATSSAALPRILGAGARAPSRWLGFLGKATPRPARPSRRTLGSATALMIRESEDSTDFNDKILNEPLKHSDFFNVKELFS VRSLFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYRKGIILFISRNRQFSYLIENMAR DCGEYAHTRYFRGGMLTNARLLFGPTVRLPDLIIFLHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPVPGND DSPLAVHLYCRLFQTAITRAKEKRQQVEALYRLQGQKEPGDQGPAHPPGADMSHSL Q9Y399 28S ribosomal protein S24, mitochondrial Homo sapiens 0.019046164 1 LEVO MAASVCSGLLGPRVLSWSRELPCAWRALHTSPVCAKNRAARVRVSKGDKPVTYEEAHAPHYIAHRKGWLSLHTGNLDGED HAAERTVEDVFLRKFMWGTFPGCLADQLVLKRRGNQLEICAVVLRQLSPHKYYFLVGYSETLLSYFYKCPVRLHLQTVPS KVVYKYL Q96EL2 28S ribosomal protein S5, mitochondrial Homo sapiens 0.048094594 1 LEVO MATAVRAVGCLPVLCSGTAGHLLGRQCSLNTLPAASILAWKSVLGNGHLSSLGTRDTHPYASLSRALQTQCCISSPSHLM SQQYRPYSFFTKLTADELWKGALAETGAGAKKGRGKRTKKKKRKDLNRGQIIGEGRYGFLWPGLNVPLMKNGAVQTIAQR SKEEQEKVEADMIQQREEWDRKKKMKVKRERGWSGNSWGGISLGPPDPGPCGETYEDFDTRILEVRNVFTMTAKEGRKKS IRVLVAVGNGKGAAGFSIGKATDRMDAFRKAKNRAVHHLHYIERYEDHTIFHDISLRFKRTHIKMKKQPKGYGLRCHRAI ITICRLIGIKDMYAKVSGSINMLSLTQGLFRGLSRQETHQQLADKKGLHVVEIREECGPLPIVVASPRGPLRKDPEPEDE VPDVKLDWEDVKTAQGMKRSVWSNLKRAAT P82675 28S ribosomal protein S6, mitochondrial Homo sapiens 0.014250588 1 LEVO MPRYELALILKAMQRPETAATLKRTIEALMDRGAIVRDLENLGERALPYRISAHSQQHNRGGYFLVDFYAPTAAVESMVE HLSRDIDVIRGNIVKHPLTQELKECEGIVPVPLAEKLYSTKKRKK P82932 28S ribosomal protein S7, mitochondrial Homo sapiens 0.028186153999999998 1 LEVO MAAPAVKVARGWSGLALGVRRAVLQLPGLTQVRWSRYSPEFKDPLIDKEYYRKPVEELTEEEKYVRELKKTQLIKAAPAG KTSSVFEDPVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYHAASAEEQATIERNPYTIFHQALKNCEPMIGLVP ILKGGRFYQVPVPLPDRRRRFLAMKWMITECRDKKHQRTLMPEKLSHKLLEAFHNQGPVIKRKHDLHKMAEANRALAHYR WW Q9Y2R9 28S ribosomal protein S9, mitochondrial Homo sapiens 0.045909859 1 LEVO MAAPCVSYGGAVSYRLLLWGRGSLARKQGLWKTAAPELQTNVRSQILRLRHTAFVIPKKNVPTSKRETYTEDFIKKQIEE FNIGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFEKRARPVMKHPEQIFPRQRAIQWGEDGRPFHYLFYTGKQSYYS LMHDVYGMLLNLEKHQSHLQAKSLLPEKTVTRDVIGSRWLIKEELEEMLVEKLSDLDYMQFIRLLEKLLTSQCGAAEEEF VQRFRRSVTLESKKQLIEPVQYDEQGMAFSKSEGKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFPITQDREQLMFPFHFV DRLGKHDVTCTVSGGGRSAQAGAIRLAMAKALCSFVTEDEVEWMRQAGLLTTDPRVRERKKPGQEGARRKFTWKKR P82933 28S ribosomal protein S10, mitochondrial Homo sapiens 0.0230335 1 LEVO MAARTAFGAVCRRLWQGLGNFSVNTSKGNTAKNGGLLLSTNMKWVQFSNLHVDVPKDLTKPVVTISDEPDILYKRLSVLV KGHDKAVLDSYEYFAVLAAKELGISIKVHEPPRKIERFTLLQSVHIYKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYI QRNLPEGVAMEVTKTQLEQLPEHIKEPIWETLSEEKEESKS P82664 28S ribosomal protein S11, mitochondrial Homo sapiens 0.020663805 1 LEVO MQAVRNAGSRFLRSWTWPQTAGRVVARTPAGTICTGARQLQDAAAKQKVEQNAAPSHTKFSIYPPIPGEESSLRWAGKKF EEIPIAHIKASHNNTQIQVVSASNEPLAFASCGTEGFRNAKKGTGIAAQTAGIAAAARAKQKGVIHIRVVVKGLGPGRLS AMHGLIMGGLEVISITDNTPIPH(5F0)GCRPRKARKL P82912 28S ribosomal protein S12, mitochondrial Homo sapiens 0.015200947 1 LEVO MSWSGLLHGLNTSLTCGPALVPRLWATCSMATLNQMHRLGPPKRPPRKLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKC CRVRLSTGREAVCFIPGEGHTLQEHQIVLVEGGRTQDLPGVKLTVVRGKYDCGHVQKK O15235 28S ribosomal protein S14, mitochondrial Homo sapiens 0.015168787999999999 1 LEVO MAAFMLGSLLRTFKQMVPSSASGQVRSHYVDWRMWRDVKRRKMAYEYADERLRINSLRKNTILPKILQDVADEEIAALPR DSCPVRIRNRCVMTSRPRGVKRRWRLSRIVFRHLADHGQLSGIQRATW O60783 28S ribosomal protein S15, mitochondrial Homo sapiens 0.029903293 1 LEVO MLRVAWRTLSLIRTRAVTQVLVPGLPGGGSAKFPFNQWGLQPRSLLLQAARGYVVRKPAQSRLDDDPPPSTLLKDYQNVP GIEKVDDVVKRLLSLEMANKKEMLKIKQEQFMKKIVANPEDTRSLEARIIALSVKIRSYEEHLEKHRKDKAHKRYLLMSI DQRKKMLKNLRNTNYDVFEKICWGLGIEYTFPPLYYRRAHRRFVTKKALCIRVFQETQKLKKRRRALKAAAAAQKQAKRR NPDSPAKAIPKTLKDSQ P82914 28S ribosomal protein S16, mitochondrial Homo sapiens 0.015371898999999998 1 LEVO MVHLTTLLCKAYRGGHLTIRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPNSHGEKLVALNLDRIRHWIGCG AHLSKPMEKLLGLAGFFPLHPMMITNAERLRRKRAREVLLASQKTDAEATDTEATET Q9Y3D3 28S ribosomal protein S17, mitochondrial Homo sapiens 0.014526078 1 LEVO MSVVRSSVHARWIVGKVIGTKMQKTAKVRVTRLVLDPYLLKYFNKRKTYFAHDALQQCTVGDIVLLRALPVPRAKHVKHE LAEIVFKVGKVIDPVTGKPCAGTTYLESPLSSETTQLSKNLEELNISSAQ Q9Y2R5 28S ribosomal protein S18b, mitochondrial Homo sapiens 0.029440629 1 LEVO MAASVLNTVLRRLPMLSLFRGSHRVQVPLQTLCTKAPSEEDSLSSVPISPYKDEPWKYLESEEYQERYGSRPVWADYRRN HKGGVPPQRTRKTCIRRNKVVGNPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDH GLLIYHIPQVEPRDLDFSTSHGAVSATPPAPTLVSGDPWYPWYNWKQPPERELSRLRRLYQGHLQEESGPPPESMPKMPP RTPAEASSTGQTGPQSAL Q9Y676 28S ribosomal protein S18c, mitochondrial Homo sapiens 0.015876786 1 LEVO MAAVVAVCGGLGRKKLTHLVTAAVSLTHPGTHTVLWRRGCSQQVSSNEDLPISMENPYKEPLKKCILCGKHVDYKNVQLL SQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGFMPVTYKDPAYLKDPKVCNIRYRE Q9Y3D5 28S ribosomal protein S21, mitochondrial Homo sapiens 0.010675494
Natural variant Cys50Arg
1 LEVO (AYA)KHLKFIARTVMVQEGNVESAYRTLNRILTMDGLIEDIKHRRYYEKPCRRRQRESYERCRRIYNMEMARKINFLMR KNRADPWQGC P82921 28S ribosomal protein S22, mitochondrial Homo sapiens 0.041337316 1 LEVO MAPLGTTVLLWSLLRSSPGVERVCFRARIQPWHGGLLQPLPCSFEMGLPRRRFSSEAAESGSPETKKPTFMDEEVQSILT KMTGLNLQKTFKPAIQELKPPTYKLMTQAQLEEATRQAVEAAKVRLKMPPVLEERVPINDVLAEDKILEGTETTKYVFTD ISYSIPHRERFIVVREPSGTLRKASWEERDRMIQVYFPKEGRKILTPIIFKEENLRTMYSQDRHVDVLNLCFAQFEPDST EYIKVHHKTYEDIDKRGKYDLLRSTRYFGGMVWYFVNNKKIDGLLIDQIQRDLIDDATNLVQLYHVLHPDGQSAQGAKDQ AAEGINLIKVFAKTEAQKGAYIELTLQTYQEALSRHSAAS P82650 28S ribosomal protein S23, mitochondrial Homo sapiens 0.021805664 1 LEVO MAGSRLETVGSIFSRTRDLVRAGVLKEKPLWFDVYDAFPPLREPVFQRPRVRYGKAKAPIQDIWYHEDRIRAKFYSVYGS GQRAFDLFNPNFKSTCQRFVEKYTELQKLGETDEEKLFVETGKALLAEGVILRRVGEARTQHGGSHVSRKSEHLSVRPQT ALEENETQKEVPQDQHLEAPADQSKGLLPP Q9Y3D9 28S ribosomal protein S25, mitochondrial Homo sapiens 0.020146427999999997 1 LEVO MPMKGRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKNPWVQIMMFKNMTPSPFLRFYL DSGEQVLVDVETKSNKEIMEHIRKILGKNEETLREEEEEKKQLSHPANFGPRKYCLRECICEVEGQVPCPSLVPLPKEMR GKYKAALKADAQD P82663 28S ribosomal protein S26, mitochondrial Homo sapiens 0.024259819999999998 1 LEVO MLRALSRLGAGTPCRPRAPLVLPARGRKTRHDPLAKSKIERVNMPPAVDPAEFFVLMERYQHYRQTVRALRMEFVSEVQR KVHEARAGVLAERKALKDAAEHRELMAWNQAENRRLHELRIARLRQEEREQEQRQALEQARKAEEVQAWAQRKEREVLQL QEEVKNFITRENLEARVEAALDSRKNYNWAITREGLVVRPQRRDS Q9BYN8 28S ribosomal protein S27, mitochondrial Homo sapiens 0.047669262 1 LEVO MAASIVRRGMLLARQVVLPQLSPAGKRYLLSSAYVDSHKWEAREKEHYCLADLASLMDKTFERKLPVSSLTISRLIDNIS SREEIDHAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDA LSVVFEVMMQEAFEVPSTQLLSLYVLFHCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQGL RAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIKLCREALDVLGAVLKALTSADGASEEQSQNDEDNQGSEKLVEQLDIE ETEQSKLPQYLERFKALHSKLQALGKIESEGLLSLTTQLVKEKLSTCEAEDIATYEQNLQQWHLDLVQLIQREQQQREQA KQEYQAQKAAKASA Q92552 28S ribosomal protein S28, mitochondrial Homo sapiens 0.020878846 1 LEVO MAALCRTRAVAAESHFLRVFLFFRPFRGVGTESGSESGSSNAKEPKTRAGGFASALERHSELLQKVEPLQKGSPKNVESF ASMLRHSPLTQMGPAKDKLVIGRIFHIVENDLYIDFGGKFHCVCRRPEVDGEKYQKGTRVRLRLLDLELTSRFLGATTDT TVLEANAVLLGIQESKDSRSKEEHHEK Q9Y2Q9 28S ribosomal protein S29, mitochondrial Homo sapiens 0.045634406 1 LEVO MMLKGITRLISRIHKLDPGRFLHMGTQARQSIAAHLDNQVPVESPRAISRTNENDPAKHGDQHEGQHYNISPQDLETVFP HGLPPRFVMQVKTFSEACLMVRKPALELLHYLKNTSFAYPAIRYLLYGEKGTGKTLSLCHVIHFCAKQDWLILHIPDAHL WVKNCRDLLQSSYNKQRFDQPLEASTWLKNFKTTNERFLNQIKVQEKYVWNKRESTEKGSPLGEVVEQGITRVRNATDAV GIVLKELKRQSSLGMFHLLVAVDGINALWGRTTLKREDKSPIAPEELALVHNLRKMMKNDWHGGAIVSALSQTGSLFKPR KAYLPQELLGKEGFDALDPFIPILVSNYNPKEFESCIQYYLENNWLQHEKAPTEEGKKELLFLSNANPSLLERHCAYL P51398 28S ribosomal protein S31, mitochondrial Homo sapiens 0.045391472999999995 1 LEVO MFPRVSTFLPLRPLSRHPLSSGSPETSAAAIMLLTVRHGTVRYRSSALLARTKNNIQRYFGTNSVICSKKDKQSVRTEET SKETSESQDSEKENTKKDLLGIIKGMKVELSTVNVRTTKPPKRRPLKSLEATLGRLRRATEYAPKKRIEPLSPELVAAAS AVADSLPFDKQTTKSELLSQLQQHEEESRAQRDAKRPKISFSNIISDMKVARSATARVRSRPELRIQFDEGYDNYPGQEK TDDLKKRKNIFTGKRLNIFDMMAVTKEAPETDTSPSLWDVEFAKQLATVNEQPLQNGFEELIQWTKEGKLWEFPINNEAG FDDDGSEFHEHIFLEKHLESFPKQGPIRHFMELVTCGLSKNPYLSVKQKVEHIEWFRNYFNEKKDILKESNIQFN Q92665 28S ribosomal protein S33, mitochondrial Homo sapiens 0.012657775999999999 1 LEVO MSSLSEYAFRMSRLSARLFGEVTRPTNSKSMKVVKLFSELPLAKKKETYDWYPNHHTYAELMQTLRFLGLYRDEHQDFMD EQKRLKKLRGKEKPKKGEGKRAAKRK Q9Y291 28S ribosomal protein S34, mitochondrial Homo sapiens 0.025695548999999998 1 LEVO MARKKVRPRLIAELARRVRALREQLNRPRDSQLYAVDYETLTRPFSGRRLPVRAWADVRRESRLLQLLGRLPLFGLGRLV TRKSWLWQHDEPCYWRLTRVRPDYTAQNLDHGKAWGILTFKGKTESEAREIEHVMYHDWRLVPKHEEEAFTAFTPAPEDS LASVPYPPLLRAMIIAERQKNGDTSTEEPMLNVQRIRMEPWDYPAKQEDKGRAKGTPV P82930 28S ribosomal protein S35, mitochondrial Homo sapiens 0.036898328 1 LEVO MAAAALPAWLSLQSRARTLRAFSTAVYSATPVPTPSLPERTPGNERPPRRKALPPRTEKMAVDQDWPSVYPVAAPFKPSA VPLPVRMGYPVKKGVPMAKEGNLELLKIPNFLHLTPVAIKKHCEALKDFCTEWPAALDSDEKCEKHFPIEIDSTDYVSSG PSVRNPRARVVVLRVKLSSLNLDDHAKKKLIKLVGERYCKTTDVLTIKTDRCPLRRQNYDYAVYLLTVLYHESWNTEEWE KSKTEADMEEYIWENSSSERNILETLLQMKAAEKNMEINKEELLGTKEIEEYKKSVVSLKNEEENENSISQYKESVKRLL NVT P82673 Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 Homo sapiens 0.013409661 1 LEVO (AYA)TPSLRGRLARFGNPRKPVLKPNKPLILANRVGERRREKGEATCITEMSVMMACWKQNEFRDDACRKEIQGFLDCA ARAQEARKMRSIQETLGESGSLLPNKLNKLLQRFPNKPYLS Q96BP2 Aurora kinase A-interacting protein Homo sapiens 0.022395326 1 LEVO MLLGRLTSQLLRAVPWAGGRPPWPVSGVLGSRVCGPLYSTSPAGPGRAASLPRKGAQLELEEMLVPRKMSVSPLESWLTA RCFLPRLDTGTAGTVAPPQSYQCPPSQIGEGAEQGDEGVADAPQIQCKNVLKIRRRKMNHHKYRKLVKKTRFLRRKVQEG RLRRKQIKFEKDLRRIWLKAGLKEAPEGWQTPKIYLRGK Q9NWT8 Pentatricopeptide repeat domain-containing protein 3, mitochondrial Homo sapiens 0.078648547 1 LEVO MAVVSAVRWLGLRSRLGQPLTGRRAGLCEQARSCRFYSGSATLSKVEGTDVTGIEEVVIPKKKTWDKVAVLQALASTVNR DTTAVPYVFQDDPYLMPASSLESRSFLLAKKSGENVAKFIINSYPKYFQKDIAEPHIPCLMPEYFEPQIKDISEAALKER IELRKVKASVDMFDQLLQAGTTVSLETTNSLLDLLCYYGDQEPSTDYHFQQTGQSEALEEENDETSRRKAGHQFGVTWRA KNNAERIFSLMPEKNEHSYCTMIRGMVKHRAYEQALNLYTELLNNRLHADVYTFNALIEATVCAINEKFEEKWSKILELL RHMVAQKVKPNLQTFNTILKCLRRFHVFARSPALQVLREMKAIGIEPSLATYHHIIRLFDQPGDPLKRSSFIIYDIMNEL MGKRFSPKDPDDDKFFQSAMSICSSLRDLELAYQVHGLLKTGDNWKFIGPDQHRNFYYSKFFDLICLMEQIDVTLKWYED LIPSAYFPHSQTMIHLLQALDVANRLEVIPKIWKDSKEYGHTFRSDLREEILMLMARDKHPPELQVAFADCAADIKSAYE SQPIRQTAQDWPATSLNCIAILFLRAGRTQEAWKMLGLFRKHNKIPRSELLNELMDSAKVSNSPSQAIEVVELASAFSLP ICEGLTQRVMSDFAINQEQKEALSNLTALTSDSDTDSSSDSDSDTSEGK Q96EY7 Translation initiation factor IF-3, mitochondrial Homo sapiens 0.032545461
Natural variant Thr68Ile and Phe263Leu
1 Homo sapiens LEVO MAALFLKRLTLQTVKSENSCIRCFGKHILQKTAPAQLSPIASAPRLSFLIHAKAFSTAEDTQNEGKKIKKNKTAFSNVGR KISQRVIHLFDEKGNDLGNMHRANVIRLMDERDLRLVQRNTSTEPAEYQLMTGLQILQERQRLREMEKANPKTGPTLRKE LILSSNIGQHDLDTKTKQIQQWIKKKHLVQITIKKGKNVDVSENEMEEIFHQILQTMPGIATFSSRPQAVQGGKALMCVL RALSKNEEKAYKETQETQERDTLNKDHGNDKESNVLHQGLEVLFQ Q9H2K0 NICOTINAMIDE-ADENINE-DINUCLEOTIDE 0.0006634249999999999 1 NAD SPERMINE 0.00020234 1 SPM [(2~{S},3~{S},4~{S},5~{R},6~{S})-2-[(2~{R},3~{R},4~{R},5~{S})-2-[(1~{R},2~{S},3~{R},4~{R},5~{S},6~{R})-2,4-bis[[azaniumylidene(azanyl)methyl]amino]-3,5,6-tris(oxidanyl)cyclohexyl]oxy-4-[bis(oxidanyl)methyl]-5-methyl-4-oxidanyl-oxolan-3-yl]oxy-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-3-yl]-methyl-azanium 0.000602613 1 5I0 POTASSIUM ION 3.9098e-05 21 K MAGNESIUM ION 2.4305e-05 62 MG ZINC ION 6.5409e-05 1 ZN FE2/S2 (INORGANIC) CLUSTER 0.00017581999999999998 2 FES ADENOSINE-5'-TRIPHOSPHATE 0.000507181 1 ATP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER 0.000522196 1 GNP water 1.8015e-05 3085 HOH singleParticle particle 7.5 0.2 KCl potassium chloride 5.0 Mg(CH3COO)2 magnesium acetate 25.0 HEPES-KOH buffer pH 7.5 0.05 C24H46O11 n-dodecyl-beta-D-maltopyranoside 0.25 C10H17N6O13P3 5'-guanylyl imidodiphosphate Quantifoil R2/1 COPPER CARBON CONTINUOUS 3.0 GLOW DISCHARGE ETHANE 100 297 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 70.0 2.7 0.5 4.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GIF Quantum LS 20 GATAN K2 SUMMIT (4k x 4k) COUNTING 1-20 31773 4.0 30.0 1 2487123 Gctf 1.06 PHASE FLIPPING AND AMPLITUDE CORRECTION EMD-10021 C1 BACK PROJECTION 2.4 FSC 0.143 CUT-OFF RELION 3.1 885199 PROJECTION MATCHING RELION 3.0 PROJECTION MATCHING RELION 3.1 RELION 3.1 emd_13170.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 720 720 720 0 0 0 720 720 720 398.4 398.4 398.4 90.0 90.0 90.0 Y X Z -1.1100056 2.5630002 -0.00000000000352 0.036390368 0.55333334 0.55333334 0.55333334 0.15 AUTHOR Oversampled combined map of local-masked refined maps with sharpening and local-resolution filtering. 6RW4 PDB experimental model REAL emd_13170_msk_1.map emd_13170_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 480 480 480 0 0 0 480 480 480 398.4 398.4 398.4 90.0 90.0 90.0 X Y Z -0.013049043 0.067906335 -0.00005218437 0.0017505694 0.83 0.83 0.83 AUTHOR Combined map of local-masked refined maps without sharpening emd_13170_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 480 480 480 0 0 0 480 480 480 398.4 398.4 398.4 90.0 90.0 90.0 X Y Z -0.017521277 0.07672168 -0.00003524875 0.002010689 0.83 0.83 0.83 AUTHOR Overall refinement emd_13170_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 480 480 480 0 0 0 480 480 480 398.4 398.4 398.4 90.0 90.0 90.0 X Y Z -0.017007539 0.07896465 -0.0000351942 0.0020109836 0.83 0.83 0.83 AUTHOR Overall refinement