Structure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2).

2024-07-10 REL PDBe PDBe PDBe 2021-05-04 2021-06-09 2021-06-09 2024-07-10 German Research Foundation (DFG) RI 2715/1-1 Germany German Research Foundation (DFG) EXC 2067/1-390729940 Germany German Research Foundation (DFG) FOR2848 Germany German Research Foundation (DFG) SFB860 Germany German Research Foundation (DFG) SFB1160 Germany Structure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2). Hillen HS Lavdovskaia E Mitochondria, Ribosome, Biogenesis, GTPase, NSUN4, MTERF4 Hillen HS Lavdovskaia E Nadler F Hanitsch E Linden A Bohnsack KE Urlaub H Richter-Dennerlein R Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling. Nat Commun UK 12 3672 3672 2021 34135319 doi:10.1038/s41467-021-23702-y 2041-1723 Hillen HS Lavdovskaia E Nadler F Hanitsch E Linden A Bohnsack KE Urlaub H Richter-Dennerlein R Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling Biorxiv US 2021 doi:10.1101/2021.03.17.435767 2692-8205 7of6 FULLOVERLAP Mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2). Mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2). 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 Homo sapiens HEK293-Flp-In T-Rex Mitochondria 39S ribosomal protein L32, mitochondrial Homo sapiens 0.021437798999999997 1 LEVO MALAMLVLVVSPWSAARGVLRNYWERLLRKLPQSRPGFPSPPWGPALAVQGPAMFTEPANDTSGSKENSSLLDSIFWMAA PKNRRTIEVNRCRRRNPQKLIKVKNNIDVCPECGHLKQKHVLCAYCYEKVCKETAEIRRQIGKQEGGPFKAPTIETVVLY TGETPSEQDQGKRIIERDRKRPSWFTQN Q9BYC8 39S ribosomal protein L33, mitochondrial Homo sapiens 0.007635204 1 LEVO MFLSAVFFAKSKSKNILVRMVSEAGTGFCFNTKRNRLREKLTLLHYDPVVKQRVLFVEKKKIRSL O75394 39S ribosomal protein L34, mitochondrial Homo sapiens 0.010183913 1 LEVO MAVLAGSLLGPTSRSAALLGGRWLQPRAWLGFPDAWGLPTPQQARGKARGNEYQPSNIKRKNKHGWVRRLSTPAGVQVIL RRMLKGRKSLSH Q9BQ48 39S ribosomal protein L35, mitochondrial Homo sapiens 0.021558488 1 LEVO MAASAFAGAVRAASGILRPLNILASSTYRNCVKNASLISALSTGRFSHIQTPVVSSTPRLTTSERNLTCGHTSVILNRMA PVLPSVLKLPVRSLTYFSARKGKRKTVKAVIDRFLRLHCGLWVRRKAGYKKKLWKKTPARKKRLREFVFCNKTQSKLLDK MTTSFWKRRNWYVDDPYQKYHDRTNLKV Q9NZE8 39S ribosomal protein L36, mitochondrial Homo sapiens 0.011809301 1 LEVO MANLFIRKMVNPLLYLSRHTVKPRALSTFLFGSIRGAAPVAVEPGAAVRSLLSPGLLPHLLPALGFKNKTVLKKRCKDCY LVKRRGRWYVYCKTHPRHKQRQM Q9P0J6 39S ribosomal protein L37, mitochondrial Homo sapiens 0.048183343999999996 1 LEVO MALASGPARRALAGSGQLGLGGFGAPRRGAYEWGVRSTRKSEPPPLDRVYEIPGLEPITFAGKMHFVPWLARPIFPPWDR GYKDPRFYRSPPLHEHPLYKDQACYIFHHRCRLLEGVKQALWLTKTKLIEGLPEKVLSLVDDPRNHIENQDECVLNVISH ARLWQTTEEIPKRETYCPVIVDNLIQLCKSQILKHPSLARRICVQNSTFSATWNRESLLLQVRGSGGARLSTKDPLPTIA SREEIEATKNHVLETFYPISPIIDLHECNIYDVKNDTGFQEGYPYPYPHTLYLLDKANLRPHRLQPDQLRAKMILFAFGS ALAQARLLYGNDAKVLEQPVVVQSVGTDGRVFHFLVFQLNTTDLDCNEGVKNLAWVDSDQLLYQHFWCLPVIKKRVVVEP VGPVGFKPETFRKFLALYLHGAA Q9BZE1 39S ribosomal protein L38, mitochondrial Homo sapiens 0.04465943 1 LEVO MAAPWWRAALCECRRWRGFSTSAVLGRRTPPLGPMPNSDIDLSNLERLEKYRSFDRYRRRAEQEAQAPHWWRTYREYFGE KTDPKEKIDIGLPPPKVSRTQQLLERKQAIQELRANVEEERAARLRTASVPLDAVRAEWERTCGPYHKQRLAEYYGLYRD LFHGATFVPRVPLHVAYAVGEDDLMPVYCGNEVTPTEAAQAPEVTYEAEEGSLWTLLLTSLDGHLLEPDAEYLHWLLTNI PGNRVAEGQVTCPYLPPFPARGSGIHRLAFLLFKQDQPIDFSEDARPSPCYQLAQRTFRTFDFYKKHQETMTPAGLSFFQ CRWDDSVTYIFHQLLDMREPVFEFVRPPPYHPKQKRFPHRQPLRYLDRYRDSHEPTYGIY Q96DV4 39S ribosomal protein L39, mitochondrial Homo sapiens 0.038764785 1 LEVO MEALAMGSRALRLWLVAPGGGIKWRFIATSSASQLSPTELTEMRNDLFNKEKARQLSLTPRTEKIEVKHVGKTDPGTVFV MNKNISTPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDCDPGEVNKAYWRSCAMMMGCVIERAFKD EYMVNLVRAPEVPVISGAFCYDVVLDSKLDEWMPTKENLRSFTKDAHALIYKDLPFETLEVEAKVALEIFQHSKYKVDFI EEKASQNPERIVKLHRIGDFIDVSEGPLIPRTSICFQYEVSAVHNLQPTQPSLIRRFQGVSLPVHLRAHFTIWDKLLERS RKMVTEDQSKATEECTST Q9NYK5 39S ribosomal protein L40, mitochondrial Homo sapiens 0.024534421999999997 1 LEVO MTASVLRSISLALRPTSGLLGTWQTQLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQ ELIPIEDFITPLKFLDKARERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLHAE AIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRYNDITKVYTQVEFKR Q9NQ50 39S ribosomal protein L41, mitochondrial Homo sapiens 0.015404708 1 LEVO MGVLAAAARCLVRGADRMSKWTSKRGPRSFRGRKGRGAKGIGFLTSGWRFVQIKEMVPEFVVPDLTGFKLKPYVSYLAPE SEETPLTAAQLFSEAVAPAIEKDFKDGTFDPDNLEKYGFEPTQEGKLFQLYPRNFLR Q8IXM3 16S ribosomal RNA Homo sapiens 0.500061656 1 GCUAAACCUAGCCCCAAACCCACUCCACCUUACUACCAGACAACCUUAGCCAAACCAUUUACCCAAAUAAAGUAUAGGCG AUAGAAAUUGAAACCUGGCGCAAUAGAUAUAGUACCGCAAGGGAAAGAUGAAAAAUUAUAACCAAGCAUAAUAUAGCAAG GACUAACCCCUAUACCUUCUGCAUAAUGAAUUAACUAGAAAUAACUUUGCAAGGAGAGCCAAAGCUAAGACCCCCGAAAC CAGACGAGCUACCUAAGAACAGCUAAAAGAGCACACCCGUCUAUGUAGCAAAAUAGUGGGAAGAUUUAUAGGUAGAGGCG ACAAACCUACCGAGCCUGGUGAUAGCUGGUUGUCCAAGAUAGAAUCUUAGUUCAACUUUAAAUUUGCCCACAGAACCCUC UAAAUCCCCUUGUAAAUUUAACUGUUAGUCCAAAGAGGAACAGCUCUUUGGACACUAGGAAAAAACCUUGUAGAGAGAGU AAAAAAUUUAACACCCAUAGUAGGCCUAAAAGCAGCCACCAAUUAAGAAAGCGUUCAAGCUCAACACCCACUACCUAAAA AAUCCCAAACAUAUAACUGAACUCCUCACACCCAAUUGGACCAAUCUAUCACCCUAUAGAAGAACUAAUGUUAGUAUAAG UAACAUGAAAACAUUCUCCUCCGCAUAAGCCUGCGUCAGAUUAAAACACUGAACUGACAAUUAACAGCCCAAUAUCUACA AUCAACCAACAAGUCAUUAUUACCCUCACUGUCAACCCAACACAGGCAUGCUCAUAAGGAAAGGUUAAAAAAAGUAAAAG GAACUCGGCAAAUCUUACCCCGCCUGUUUACCAAAAACAUCACCUCUAGCAUCACCAGUAUUAGAGGCACCGCCUGCCCA GUGACACAUGUUUAACGGCCGCGGUACCCUAACCGUGCAAAGGUAGCAUAAUCACUUGUUCCUUAAAUAGGGACCUGUAU GAAUGGCUCCACGAGGGUUCAGCUGUCUCUUACUUUUAACCAGUGAAAUUGACCUGCCCGUGAAGAGGCGGGCAUAACAC AGCAAGACGAGAAGACCCUAUGGAGCUUUAAUUUAUUAAUGCAAACAGUACCUAACAAACCCACAGGUCCUAAACUACCA AACCUGCAUUAAAAAUUUCGGUUG(OMG)GGCGACCUCGGAGCAGAACCCAACCUCCGAGCAGUACAUGCUAAGACUUCA CCAGUCAAAGCGAACUACUAUACUCAAUUGAUCCAAUAACUUGACCAACGGAACAAGUUACCCUAGGGAUAACAGCGCAA UCCUAUUCUAGAGUCCAUAUCAACAAUAGGGUUUACGACCUCGAUGUUGGAUCAGGACAUCCCGAUGGUGCAGCCGCUAU UAAAGGUUCGUU(OMU)(OMG)UUCAACGAUUAAAGUCCUACGUGAUCUGAGUUCAGACCGGAGUAAUCCAGGUCGGUUU CUAUCUACUUUCAAAUUCCUCCCUGUACGAAAGGACAAGAGAAAUAAGGCCUACUUCACAAAGCGCCUUCCCCCGUAAAU GAUAUCAUCUCAACUUAGUAUUAUACCCACACCCACCCAAGAACAGGGUUU KU686631.1 Mitochondrial tRNAVal Homo sapiens 0.022022131 1 CAGAGUGUAGCUUAACACAAAGCACCCAACUUACACUUAGGAGAUUUCAACUUAACUUGACCGCUCUGA MH782168.1 Putative GTP-binding protein 6 Homo sapiens 0.056984414 1 LEVO MWALRAAVRPGLRLSRVGRGRSAPRAAAPSCPARALAAVGRRSPGNLEGPWGGGRGLRADGGRSRTGDDEEEPEDADENA EEELLRGEPLLPAGTQRVCLVHPDVKWGPGKSQMTRAEWQVAEATALVHTLDGWSVVQTMVVSTKTPDRKLIFGKGNFEH LTEKIRGSPDITCVFLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLKRDVAHL YRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGKTTLIKALTGDAAI QPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTL RGLQLPAPLLDSMVEVHNKVDLVPGYSPTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGAQLSWLYK EATVQEVDVIPEDGAADVRVIISNSAYGKFRKLFPG O43824 39S ribosomal protein L2, mitochondrial Homo sapiens 0.033355941 1 LEVO MALCALTRALRSLNLAPPTVAAPAPSLFPAAQMMNNGLLQQPSALMLLPCRPVLTSVALNANFVSWKSRTKYTITPVKMR KSGGRDHTGRIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALVAGGSRKRWIIATENMQAG DTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETC VATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGRKIRPLPPMKSYVKLPSASAQS Q5T653 39S ribosomal protein L3, mitochondrial Homo sapiens 0.038689562 1 LEVO MPGWRLLTQVGAQVLGRLGDGLGAALGPGNRTHIWLFVRGLHGKSGTWWDEHLSEENVPFIKQLVSDEDKAQLASKLCPL KDEPWPIHPWEPGSFRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRFRKATS ILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRP GAVATGDIGRVWPGTKMPGKMGNIYRTEYGLKVWRINTKHNIIYVNGSVPGHKNCLVKVKDSKLPAYKDLGKNLPFPTYF PDGDEEELPEDLYDENVCQPGAPSITFA P09001 39S ribosomal protein L4, mitochondrial Homo sapiens 0.034970194999999996 1 LEVO MLQFVRAGARAWLRPTGSQGLSSLAEEAARATENPEQVASEGLPEPVLRKVELPVPTHRRPVQAWVESLRGFEQERVGLA DLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTS YYYMLPMKVRALGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYRRWGDSVLLVDLTHEEMPQSIVEATSRLKTF NLIPAVGLNVHSMLKHQTLVLTLPTVAFLEDKLLWQDSRYRPLYPFSLPYSDFPRPLPHATQGPAATPYHC Q9BYD3 39S ribosomal protein L9, mitochondrial Homo sapiens 0.030296354999999997 1 LEVO MAAPVVTAPGRALLRAGAGRLLRGGVQELLRPRHEGNAPDLACNFSLSQNRGTVIVERWWKVPLAGEGRKPRLHRRHRVY KLVEDTKHRPKENLELILTQSVENVGVRGDLVSVKKSLGRNRLLPQGLAVYASPENKKLFEEEKLLRQEGKLEKIQTKAG EATVKFLKSCRLEVGMKNNVKWELNPEIVARHFFKNLGVVVAPHTLKLPEEPITRWGEYWCEVTVNGLDTVRVPMSVVNF EKPKTKRYKYWLAQQAAKAMAPTSPQI Q9BYD2 39S ribosomal protein L10, mitochondrial Homo sapiens 0.029322528999999996 1 LEVO MAAAVAGMLRGGLLPQAGRLPTLQTVRYGSKAVTRHRRVMHFQRQKLMAVTEYIPPKPAIHPSCLPSPPSPPQEEIGLIR LLRREIAAVFQDNRMIAVCQNVALSAEDKLLMRHQLRKHKILMKVFPNQVLKPFLEDSKYQNLLPLFVGHNMLLVSEEPK VKEMVRILRTVPFLPLLGGCIDDTILSRQGFINYSKLPSLPLVQGELVGGLTCLTAQTHSLLQHQPLQLTTLLDQYIREQ REKDSVMSANGKPDPDTVPDS Q7Z7H8 39S ribosomal protein L11, mitochondrial Homo sapiens 0.020716226999999997 1 LEVO MSKLGRAARGLRKPEVGGVIRAIVRAGLAMPGPPLGPVLGQRGVSINQFCKEFNERTKDIKEGIPLPTKILVKPDRTFEI KIGQPTVSYFLKAAAGIEKGARQTGKEVAGLVTLKHVYEIARIKAQDEAFALQDVPLSSVVRSIIGSARSLGIRVVKDLS SEELAAFQKERAIFLAAQKEADLAAQEEAAKK Q9Y3B7 39S ribosomal protein L13, mitochondrial Homo sapiens 0.020722988 1 LEVO MSSFSRAPQQWATFARIWYLLDGKMQPPGKLAAMASIRLQGLHKPVYHALSDCGDHVVIMNTRHIAFSGNKWEQKVYSSH TGYPGGFRQVTAAQLHLRDPVAIVKLAIYGMLPKNLHRRTMMERLHLFPDEYIPEDILKNLVEELPQPRKIPKRLDEYTQ EEIDAFPRLWTPPEDYRL Q9BYD1 39S ribosomal protein L14, mitochondrial Homo sapiens 0.015973702 1 LEVO MAFFTGLWGPFTCVSRVLSHHCFSTTGSLSAIQKMTRVRVVDNSALGNSPYHRAPRCIHVYKKNGVGKVGDQILLAIKGQ KKKALIVGHCMPGPRMTPRFDSNNVVLIEDNGNPVGTRIKTPIPTSLRKREGEYSKVLAIAQNFV Q6P1L8 39S ribosomal protein L15, mitochondrial Homo sapiens 0.03347382 1 LEVO MAGPLQGGGARALDLLRGLPRVSLANLKPNPGSKKPERRPRGRRRGRKCGRGHKGERQRGTRPRLGFEGGQTPFYIRIPK YGFNEGHSFRRQYKPLSLNRLQYLIDLGRVDPSQPIDLTQLVNGRGVTIQPLKRDYGVQLVEEGADTFTAKVNIEVQLAS ELAIAAIEKNGGVVTTAFYDPRSLDIVCKPVPFFLRGQPIPKRMLPPEELVPYYTDAKNRGYLADPAKFPEARLELARKY GYILPDITKDELFKMLCTRKDPRQIFFGLAPGWVVNMADKKILKPTDENLLKYYTS Q9P015 39S ribosomal protein L16, mitochondrial Homo sapiens 0.028496285 1 LEVO MWRLLARASAPLLRVPLSDSWALLPASAGVKTLLPVPSFEDVSIPEKPKLRFIERAPLVPKVRREPKNLSDIRGPSTEAT EFTEGNFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFAIWRVPAPFKPITRKSVGHRMGGGKGAIDHYVTPVKAGRLV VEMGGRCEFEEVQGFLDQVAHKLPFAAKAVSRGTLEKMRKDQEERERNNQNPWTFERIATANMLGIRKVLSPYDLTHKGK YWGKFYMPKRV Q9NX20 39S ribosomal protein L17, mitochondrial Homo sapiens 0.020083266 1 LEVO MRLSVAAAISHGRVFRRMGLGPESRIHLLRNLLTGLVRHERIEAPWARVDEMRGYAEKLIDYGKLGDTNERAMRMADFWL TEKDLIPKLFQVLAPRYKDQTGGYTRMLQIPNRSLDRAKMAVIEYKGNCLPPLPLPRRDSHLTLLNQLLQGLRQDLRQSQ EASNHSSHTAQTPGI Q9NRX2 39S ribosomal protein L18, mitochondrial Homo sapiens 0.02060757 1 LEVO MALRSRFWGLFSVCRNPGCRFAALSTSSEPAAKPEVDPVENEAVAPEFTNRNPRNLELLSVARKERGWRTVFPSREFWHR LRVIRTQHHVEALVEHQNGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEAGINFMVYQPTPWEAASDSMKR LQSAMTEGGVVLREPQRIYE Q9H0U6 39S ribosomal protein L19, mitochondrial Homo sapiens 0.033584996 1 LEVO MAACIAAGHWAAMGLGRSFQAARTLLPPPASIACRVHAGPVRQQSTGPSEPGAFQPPPKPVIVDKHRPVEPERRFLSPEF IPRRGRTDPLKFQIERKDMLERRKVLHIPEFYVGSILRVTTADPYASGKISQFLGICIQRSGRGLGATFILRNVIEGQGV EICFELYNPRVQEIQVVKLEKRLDDSLLYLRDALPEYSTFDVNMKPVVQEPNQKVPVNELKVKMKPKPWSKRWERPNFNI KGIRFDLCLTEQQMKEAQKWNQPWLEFDMMREYDTSKIEAAIWKEIEASKRS P49406 39S ribosomal protein L20, mitochondrial Homo sapiens 0.017479653999999997 1 LEVO MVFLTAQLWLRNRVTDRYFRIQEVLKHARHFRGRKNRCYRLAVRTVIRAFVKCTKARYLKKKNMRTLWINRITAASQEHG LKYPALIGNLVKCQVELNRKVLADLAIYEPKTFKSLAALASRRRHEGFAAALGDGKEPEGIFSRVVQYH Q9BYC9 39S ribosomal protein L21, mitochondrial Homo sapiens 0.022847682 1 LEVO MAASSLTVTLGRLASACSHSILRPSGPGAASLWSASRRFNSQSTSYLPGYVPKTSLSSPPWPEVVLPDPVEETRHHAEVV KKVNEMIVTGQYGRLFAVVHFASRQWKVTSEDLILIGNELDLACGERIRLEKVLLVGADNFTLLGKPLLGKDLVRVEATV IEKTESWPRIIMRFRKRKNFKKKRIVTTPQTVLRINSIEIAPCLL Q7Z2W9 39S ribosomal protein L22, mitochondrial Homo sapiens 0.023683732 1 LEVO MAAAVLGQLGALWIHNLRSRGKLALGVLPQSYIHTSASLDISRKWEKKNKIVYPPQLPGEPRRPAEIYHCRRQIKYSKDK MWYLAKLIRGMSIDQALAQLEFNDKKGAKIIKEVLLEAQDMAVRDHNVEFRSNLYIAESTSGRGQCLKRIRYHGRGRFGI MEKVYCHYFVKLVEGPPPPPEPPKTAVAHAKEYIQQLRSRTIVHTL Q9NWU5 39S ribosomal protein L23, mitochondrial Homo sapiens 0.017807188999999998 1 LEVO MARNVVYPLYRLGGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVAAVRTRVQHGSNKRR DHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDLYSMLEEERQQRQSSDPRRGGVPSWFGL Q16540 39S ribosomal protein L24, mitochondrial Homo sapiens 0.024953875 1 LEVO MRLSALLALASKVTLPPHYRYGMSPPGSVADKRKNPPWIRRRPVVVEPISDEDWYLFCGDTVEILEGKDAGKQGKVVQVI RQRNWVVVGGLNTHYRYIGKTMDYRGTMIPSEAPLLHRQVKLVDPMDRKPTEIEWRFTEAGERVRVSTRSGRIIPKPEFP RADGIVPETWIDGPKDTSVEDALERTYVPCLKTLQEEVMEAMGIKETRKYKKVYWY Q96A35 39S ribosomal protein L27, mitochondrial Homo sapiens 0.016102859 1 LEVO MASVVLALRTRTAVTSLLSPTPATALAVRYASKKSGGSSKNLGGKSSGRRQGIKKMEGHYVHAGNIIATQRHFRWHPGAH VGVGKNKCLYALEEGIVRYTKEVYVPHPRNTEAVDLITRLPKGAVLYKTFVHVVPAKPEGTFKLVAML Q9P0M9 39S ribosomal protein L28, mitochondrial Homo sapiens 0.030202866999999998 1 LEVO MPLHKYPVWLWKRLQLREGICSRLPGHYLRSLEEERTPTPVHYRPHGAKFKINPKNGQRERVEDVPIPIYFPPESQRGLW GGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDEAYGLDFYILKTPKEDLCSKFGMD LKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEFAIPEEEAEWVGLTLEEAIEKQRLLEEKDPVPLFKIYVAELIQQLQQ QALSEPAVVQKRASGQ Q13084 39S ribosomal protein L47, mitochondrial Homo sapiens 0.029508535 1 LEVO MAAAGLALLCRRVSSALKSSRSLITPQVPACTGFFLSLLPKSTPNVTSFHQYRLLHTTLSRKGLEEFFDDPKNWGQEKVK SGAAWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQRLPMPSPERLDKVVDSMDALDKVVQEREDALRLLQTGQ ERARPGAWRRDIFGRIIWHKFKQWVIPWHLNKRYNRKRFFALPYVDHFLRLEREKRARIKARKENLERKKAKILLKKFPH LAEAQKSSLV Q9HD33 39S ribosomal protein L30, mitochondrial Homo sapiens 0.018582812 1 LEVO MAGILRLVVQWPPGRLQTVTKGVESLICTDWIRHKFTRSRIPEKVFQASPEDHEKYGGDPQNPHKLHIVTRIKSTRRRPY WEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLIRIKPLKLPQGLPAEENMSNTCLKSTGELVVQWHLKPVEQKAHE S Q8TCC3 39S ribosomal protein L42, mitochondrial Homo sapiens 0.016691176 1 LEVO MAVAAVKWVMSKRTILKHLFPVQNGALYCVCHKSTYSPLPDDYNCNVELALTSDGRTIVCYHPSVDIPYEHTKPIPRPDP VHNNEETHDQVLKTRLEEKVEHLEEGPMIEQLSKMFFTTKHRWYPHGRYHRCRKNLNPPKDR Q9Y6G3 39S ribosomal protein L43, mitochondrial Homo sapiens 0.023457789 1 LEVO MTARGTPSRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYL NGAVREESIHCKSVEEISTLVQKLADQSGLDVIRIRKPFHTDNPSIQGQWHPFTNKPTTFRGLRPREVQDPAPAQDTGLR LSAVAPQILLPGWPDPPDLPTVDPISSSLTSAPAPMLSAVSCLPIVPALTTVCSA Q8N983 39S ribosomal protein L44, mitochondrial Homo sapiens 0.037583311999999994 1 LEVO MASGLVRLLQQGHRCLLAPVAPKLVPPVRGVKKGFRAAFRFQKELERQRLLRCPPPPVRRSEKPNWDYHAEIQAFGHRLQ ENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSNQELSEQGTSFSQTCLTQFLEDEYPDMPTEGIKNLVDFL TGEEVVCHVARNLAVEQLTLSEEFPVPPAVLQQTFFAVIGALLQSSGPERTALFIRDFLITQMTGKELFEMWKIINPMGL LVEELKKRNVSAPESRLTRQSGGTTALPLYFVGLYCDKKLIAEGPGETVLVAEEEAARVALRKLYGFTENRRPWNYSKPK ETLRAEKSITAS Q9H9J2 3.1.26.- 39S ribosomal protein L45, mitochondrial Homo sapiens 0.035402918 1 LEVO MAAPIPQGFSCLSRFLGWWFRQPVLVTQSAAIVPVRTKKRFTPPIYQPKFKTEKEFMQHARKAGLVIPPEKSDRSIHLAC TAGIFDAYVPPEGDARISSLSKEGLIERTERMKKTMASQVSIRRIKDYDANFKIKDFPEKAKDIFIEAHLCLNNSDHDRL HTLVTEHCFPDMTWDIKYKTVRWSFVESLEPSHVVQVRCSSMMNQGNVYGQITVRMHTRQTLAIYDRFGRLMYGQEDVPK DVLEYVVFEKQLTNPYGSWRMHTKIVPPWAPPKQPILKTVMIPGPQLKPEEEYEEAQGEAQKPQLA Q9BRJ2 39S ribosomal protein L46, mitochondrial Homo sapiens 0.031748107 1 LEVO MAAPVRRTLLGVAGGWRRFERLWAGSLSSRSLALAAAPSSNGSPWRLLGALCLQRPPVVSKPLTPLQEEMASLLQQIEIE RSLYSDHELRALDENQRLAKKKADLHDEEDEQDILLAQDLEDMWEQKFLQFKLGARITEADEKNDRTSLNRKLDRNLVLL VREKFGDQDVWILPQAEWQPGETLRGTAERTLATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLT GDFSQAGNKGHHVWVTKDELGDYLKPKYLAQVRRFVSDL Q9H2W6 39S ribosomal protein L48, mitochondrial Homo sapiens 0.023970813999999997 1 LEVO MSGTLEKVLCLRNNTIFKQAFSLLRFRTSGEKPIYSVGGILLSISRPYKTKPTHGIGKYKHLIKAEEPKKKKGKVEVRAI NLGTDYEYGVLNIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLDSVLTTHERVVQIS GLSATFAEIFLEIIQSSLPEGVRLSVKEHTEEDFKGRFKARPELEELLAKLK Q96GC5 39S ribosomal protein L49, mitochondrial Homo sapiens 0.019225043 1 LEVO MAATMFRATLRGWRTGVQRGCGLRLLSQTQGPPDYPRFVESVDEYQFVERLLPATRIPDPPKHEHYPTPSGWQPPRDPPP NLPYFVRRSRMHNIPVYKDITHGNRQMTVIRKVEGDIWALQKDVEDFLSPLLGKTPVTQVNEVTGTLRIKGYFDQELKAW LLEKGF Q13405 39S ribosomal protein L50, mitochondrial Homo sapiens 0.018349942999999997 1 LEVO MAARSVSGITRRVFMWTVSGTPCREFWSRFRKEKEPVVVETVEEKKEPILVCPPLRSRAYTPPEDLQSRLESYVKEVFGS SLPSNWQDISLEDSRLKFNLLAHLADDLGHVVPNSRLHQMCRVRDVLDFYNVPIQDRSKFDELSASNLPPNLKITWSY Q8N5N7 39S ribosomal protein L51, mitochondrial Homo sapiens 0.015125917 1 LEVO MAGNLLSGAGRRLWDWVPLACRSFSLGVPRLIGIRLTLPPPKVVDRWNEKRAMFGVYDNIGILGNFEKHPKELIRGPIWL RGWKGNELQRCIRKRKMVGSRMFADDLHNLNKRIRYLYKHFNRHGKFR Q4U2R6 39S ribosomal protein L52, mitochondrial Homo sapiens 0.013682657999999999 1 LEVO MAALGTVLFTGVRRLHCSVAAWAGGQWRLQQGLAANPSGYGPLTELPDWSYADGRPAPPMKGQLRRKAERETFARRVVLL SQEMDAGLQAWQLRQQKLQEEQRKQENALKPKGASLKSPLPSQ Q86TS9 39S ribosomal protein L53, mitochondrial Homo sapiens 0.012125859 1 LEVO MAAALARLGLRPVKQVRVQFCPFEKNVESTRTFLQTVSSEKVRSTNLNCSVIADVRHDGSEPCVDVLFGDGHRLIMRGAH LTALEMLTAFASHIRARDAAGSGDKPGADTGR Q96EL3 39S ribosomal protein L54, mitochondrial Homo sapiens 0.015844178 1 LEVO MATKRLFGATRTWAGWGAWELLNPATSGRLLARDYAKKPVMKGAKSGKGAVTSEALKDPDVCTDPVQLTTYAMGVNIYKE GQDVPLKPDAEYPEWLFEMNLGPPKTLEELDPESREYWRRLRKQNIWRHNRLSKNKRL Q6P161 39S ribosomal protein L55, mitochondrial Homo sapiens 0.015160433000000001 1 LEVO MAAVGSLLGRLRQSTVKATGPALRRLHTSSWRADSSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPID LDTLSPEERRARLRKREAQLQSRKEYEQELSDDLHVERYRQFWTRTKK Q7Z7F7 Ribosomal protein 63, mitochondrial Homo sapiens 0.012292333 1 LEVO MFLTALLWRGRIPGRQWIGKHRRPRFVSLRAKQNMIRRLEIEAENHYWLSMPYMTREQERGHAAVRRREAFEAIKAAATS KFPPHRFIADQLDHLNVTKKWS Q9BQC6 Peptidyl-tRNA hydrolase ICT1, mitochondrial Homo sapiens 0.023674203 1 LEVO MAATRCLRWGLSRAGVWLLPPPARCPRRALHKQKDGTEFKSIYSLDKLYPESQGSDTAWRVPNGAKQADSDIPLDRLTIS YCRSSGPGGQNVNKVNSKAEVRFHLATAEWIAEPVRQKIAITHKNKINRLGELILTSESSRYQFRNLADCLQKIRDMITE ASQTPKEPTKEDVKLHRIRIENMNRERLRQKRIHSAVKTSRRVDMD Q14197 3.1.1.29 Growth arrest and DNA damage-inducible proteins-interacting protein 1 Homo sapiens 0.025426894999999998 1 LEVO MAASVRQARSLLGVAATLAPGSRGYRARPPPRRRPGPRWPDPEDLLTPRWQLGPRYAAKQFARYGAASGVVPGSLWPSPE QLRELEAEEREWYPSLATMQESLRVKQLAEEQKRREREQHIAECMAKMPQMIVNWQQQQRENWEKAQADKERRARLQAEA QELLGYQVDPRSARFQELLQDLEKKERKRLKEEKQKRKKEARAAALAAAVAQDPAASGAPSS Q8TAE8 39S ribosomal protein S18a, mitochondrial Homo sapiens 0.022224078 1 LEVO MAALKALVSGCGRLLRGLLAGPAATSWSRLPARGFREVVETQEGKTTIIEGRITATPKESPNPPNPSGQCPICRWNLKHK YNYDDVLLLSQFIRPHGGMLPRKITGLCQEEHRKIEECVKMAHRAGLLPNHRPRLPEGVVPKSKPQLNRYLTRWAPGSVK PIYKKGPRWNRVRMPVGSPLLRDNVCYSRTPWKLYH Q9NVS2 39S ribosomal protein S30, mitochondrial Homo sapiens 0.050429577999999996 1 LEVO MAAARCWRPLLRGPRLSLHTAANAAATATETTCQDVAATPVARYPPIVASMTADSKAARLRRIERWQATVHAAESVDEKL RILTKMQFMKYMVYPQTFALNADRWYQYFTKTVFLSGLPPPPAEPEPEPEPEPEPALDLAALRAVACDCLLQEHFYLRRR RRVHRYEESEVISLPFLDQLVSTLVGLLSPHNPALAAAALDYRCPVHFYWVRGEEIIPRGHRRGRIDDLRYQIDDKPNNQ IRISKQLAEFVPLDYSVPIEIPTIKCKPDKLPLFKRQYENHIFVGSKTADPCCYGHTQFHLLPDKLRRERLLRQNCADQI EVVFRANAIASLFAWTGAQAMYQGFWSEADVTRPFVSQAVITDGKYFSFFCYQLNTLALTTQADQNNPRKNICWGTQSKP LYETIEDNDVKGFNDDVLLQIVHFLLNRPKEEKSQLLEN Q9NP92 ZINC ION 6.5409e-05 3 ZN MAGNESIUM ION 2.4305e-05 88 MG GUANOSINE-5'-TRIPHOSPHATE 0.0005231799999999999 3 GTP singleParticle particle 7.4 Quantifoil R3.5/1 CARBON CONTINUOUS 0.25 ETHANE 100 277.15 FEI VITROBOT MARK IV FEI TITAN KRIOS SPOT SCAN BRIGHT FIELD FIELD EMISSION GUN 300 0.2 2.7 81000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GIF Bioquantum 20 GATAN K3 BIOQUANTUM (6k x 4k) 40.0 1 2540514 ab initio 2.6 FSC 0.143 CUT-OFF RELION 250244 ANGULAR RECONSTITUTION RELION ANGULAR RECONSTITUTION RELION 4 RELION emd_12871.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 350 350 350 0 0 0 350 350 350 367.49997 367.49997 367.49997 90.0 90.0 90.0 X Y Z -0.025829835 0.10228435 -0.00007453478 0.004187174 1.05 1.05 1.05 0.0062 AUTHOR ::::EMDATABANK.org::::EMD-12871:::: Global 3D refinement map. 5OOL PDB experimental model FLEXIBLE FIT REAL emd_12871_msk_1.map emd_12871_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 350 350 350 0 0 0 350 350 350 367.49997 367.49997 367.49997 90.0 90.0 90.0 X Y Z -0.17641182 0.34116828 0.0006254027 0.008331271 1.05 1.05 1.05 AUTHOR ::::EMDATABANK.org::::EMD-12871:::: Post-processed map. emd_12871_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 350 350 350 0 0 0 350 350 350 367.49997 367.49997 367.49997 90.0 90.0 90.0 X Y Z -0.026644472 0.11624781 -0.00007329776 0.0047367313 1.05 1.05 1.05 AUTHOR ::::EMDATABANK.org::::EMD-12871:::: Refinement half-map 2. emd_12871_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 350 350 350 0 0 0 350 350 350 367.49997 367.49997 367.49997 90.0 90.0 90.0 X Y Z -0.028221132 0.11556983 -0.00007575851 0.0047172965 1.05 1.05 1.05 AUTHOR ::::EMDATABANK.org::::EMD-12871:::: Refinement half-map 1.