2024-07-10 REL PDBe PDBe PDBe 2021-04-30 2021-07-14 2021-07-14 2024-07-10 Russian Science Foundation 19-74-20186 Russian Federation Maksimova E Korepanov A ribosome, 30S subunit, RNA Maksimova EM Korepanov AP Kravchenko OV Baymukhametov TN Myasnikov AG Vassilenko KS Afonina ZA Stolboushkina EA Int J Mol Sci CH 22 2021 34200244 doi:10.3390/ijms22116140 1422-0067 7oe1 FULLOVERLAP 30S ribosomal subunit from E.coli 30S ribosomal subunit from E.coli 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 Escherichia coli str. K-12 substr. MG1655 0.85 16S rRNA Escherichia coli str. K-12 substr. MG1655 0.499690031 1 AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGA AGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGA UACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACC GGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGG UAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACC GCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAU UCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGU GAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCC UUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUC AUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGA CCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCA GAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGU AGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAAC CUGCGGUUGGAUCACCUCCUUA 30S ribosomal protein S4 Escherichia coli str. K-12 substr. MG1655 0.023383002 1 LEVO ARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAAR LKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALEL AEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK A0A6D2XM56 30S ribosomal protein S5 Escherichia coli str. K-12 substr. MG1655 0.017498203 1 LEVO AHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTL QHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSV EEILGK A0A6D2YBZ5 30S ribosomal protein S6, fully modified isoform Escherichia coli str. K-12 substr. MG1655 0.015727512 1 LEVO MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRF NDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANETADDAEAGDSEEEEEE P02358 30S ribosomal protein S8 Escherichia coli str. K-12 substr. MG1655 0.014015361 1 LEVO SMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRP GLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA A0A6D2XYQ3 30S ribosomal protein S11 Escherichia coli (strain K12) K12 0.013739778 1 Escherichia coli str. K-12 substr. MG1655 LEVO AKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKN LEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV A0A6D2X4T2 30S ribosomal protein S12 Escherichia coli str. K-12 substr. MG1655 0.013636961 1 LEVO ATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVIL IRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA A0A4S5B3M5 30S ribosomal protein S15 Escherichia coli str. K-12 substr. MG1655 0.010319881999999999 1 LEVO MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTR LIERLGLRR C3SSQ8 30S ribosomal protein S16 Escherichia coli str. K-12 substr. MG1655 0.009207571999999999 1 LEVO MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNK AA A0A6D2XXS6 30S ribosomal protein S17 Escherichia coli str. K-12 substr. MG1655 0.009593296 1 LEVO TDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEK AVL A0A4S5APA8 30S ribosomal protein S18 Escherichia coli str. K-12 substr. MG1655 0.008874275999999999 1 LEVO ARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTDRHQ A0A6D2XHZ3 30S ribosomal protein S20 Escherichia coli str. K-12 substr. MG1655 0.009577268 1 LEVO ANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTA QINKLA A0A4S5B3X7 30S ribosomal protein S2 Escherichia coli str. K-12 substr. MG1655 0.026650474999999996 1 LEVO ATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVK DAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDAL FVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE A0A6D2W584 30S ribosomal protein S21 Escherichia coli str. K-12 substr. MG1655 0.008524039 1 LEVO MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENARRTRLY A0A5F1E8X4 30S ribosomal protein S3 Escherichia coli str. K-12 substr. MG1655 0.025900116999999997 1 LEVO GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKG EDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAE IARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK A0A6D2XYP0 30S ribosomal protein S7 Escherichia coli str. K-12 substr. MG1655 0.019923958999999998 1 LEVO PRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVG GSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRWLSLRS FSHQAGASSKQPALGYLN C4ZUJ6 30S ribosomal protein S9 Escherichia coli str. K-12 substr. MG1655 0.014755074 1 LEVO AENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRH GITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR A0A6D2XBM7 30S ribosomal protein S10 Escherichia coli str. K-12 substr. MG1655 0.011755597 1 LEVO MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPT EKTVDALMRLDLAAGVDVQISLG A0A6D2XQX6 30S ribosomal protein S13 Escherichia coli str. K-12 substr. MG1655 0.012997271 1 LEVO ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLM DLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK A0A6D2XQ78 30S ribosomal protein S14 Escherichia coli str. K-12 substr. MG1655 0.011475363999999998 1 LEVO AKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSR IKVREAAMRGEIPGLKKASW A0A6D2WD65 30S ribosomal protein S19 Escherichia coli str. K-12 substr. MG1655 0.010324159999999999 1 LEVO PRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYR GHAADKKAKKK E3PL00 singleParticle particle 7.5 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 FEI FALCON II (4k x 4k) 2.0 1 3.05 FSC 0.143 CUT-OFF 169371 PROJECTION MATCHING PROJECTION MATCHING 4V4Q AA PDB experimental model 4V4Q AB PDB experimental model 4V4Q AC PDB experimental model 4V4Q AE PDB experimental model 4V4Q AF PDB experimental model 4V4Q AH PDB experimental model 4V4Q AI PDB experimental model 4V4Q AJ PDB experimental model 4V4Q AK PDB experimental model 4V4Q AG PDB experimental model 4V4Q AL PDB experimental model 4V4Q AM PDB experimental model 4V4Q AN PDB experimental model 4V4Q AO PDB experimental model 4V4Q AP PDB experimental model 4V4Q AQ PDB experimental model 4V4Q AR PDB experimental model 4V4Q AT PDB experimental model 4V4Q AU PDB experimental model 4V4Q AD PDB experimental model 4V4Q AS PDB experimental model RIGID BODY FIT REAL emd_12857_additional_4.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 344.0 344.0 344.0 90.0 90.0 90.0 X Y Z -1.6795144 2.7792065 -0.0012275595 0.06592875 0.86 0.86 0.86 AUTHOR ::::EMDATABANK.org::::EMD-12857:::: 30S head half B map emd_12857_additional_3.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 344.0 344.0 344.0 90.0 90.0 90.0 X Y Z -1.5713588 2.761129 -0.0013016303 0.065720424 0.86 0.86 0.86 AUTHOR ::::EMDATABANK.org::::EMD-12857:::: 30S head half A map emd_12857_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 344.0 344.0 344.0 90.0 90.0 90.0 X Y Z -2.0591865 4.010531 0.008631742 0.084858015 0.86 0.86 0.86 AUTHOR ::::EMDATABANK.org::::EMD-12857:::: 30S body emd_12857_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 344.0 344.0 344.0 90.0 90.0 90.0 X Y Z -5.1566024 7.399523 0.003008117 0.047278482 0.86 0.86 0.86 AUTHOR ::::EMDATABANK.org::::EMD-12857:::: 30S head emd_12857_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 344.0 344.0 344.0 90.0 90.0 90.0 X Y Z -0.8120123 1.6906799 0.0027295046 0.11032839 0.86 0.86 0.86 AUTHOR ::::EMDATABANK.org::::EMD-12857:::: 30S body emd_12857_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 344.0 344.0 344.0 90.0 90.0 90.0 X Y Z -0.7621978 1.9491999 0.0026832428 0.110487066 0.86 0.86 0.86 AUTHOR ::::EMDATABANK.org::::EMD-12857:::: 30S body