Cryo-EM structure of a respiratory complex I

2026-09-02 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY REFINEMENT_DESCRIPTION em_3d_fitting_list em_admin pdbx_initial_refinement_model _em_3d_fitting_list.accession_code _em_3d_fitting_list.initial_refinement_model_id _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_admin.last_update STRUCTURE_SUMMARY atom_site chem_comp_atom chem_comp_bond em_3d_fitting_list em_admin pdbx_entry_details pdbx_initial_refinement_model pdbx_modification_feature pdbx_nonpoly_scheme pdbx_unobs_or_zero_occ_atoms pdbx_validate_close_contact struct_conn _atom_site.auth_asym_id _em_3d_fitting_list.accession_code _em_3d_fitting_list.initial_refinement_model_id _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_admin.last_update _pdbx_entry_details.has_protein_modification _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_unobs_or_zero_occ_atoms.auth_asym_id REMEDIATION REPOSITORY Metalloprotein remediation STRUCTURE_SUMMARY em_admin pdbx_modification_feature pdbx_nonpoly_atom_coordination pdbx_nonpoly_atom_coordination_sphere pdbx_nonpoly_atom_coordination_sphere_order pdbx_validate_close_contact struct_conn _em_admin.last_update EXPERIMENTAL_SUMMARY em_admin _em_admin.last_update PDBe PDBe 2021-04-12 2021-11-10 2021-11-10 2026-09-02 German Research Foundation (DFG) ZI 552/4-2 Germany Cryo-EM structure of a respiratory complex I Parey K Vonck J Complex I, NADH dehydrogenase, Mitochondrion proton pumping, Ubiquinone, Oxidoreductase Parey K Lasham J Mills DJ Djurabekova A Haapanen O Yoga EG Xie H Kuhlbrandt W Sharma V Vonck J Zickermann V High-resolution structure and dynamics of mitochondrial complex I-Insights into the proton pumping mechanism. Sci Adv US 7 eabj3221 eabj3221 2021 34767441 doi:10.1126/sciadv.abj3221 2375-2548 7o71 FULLOVERLAP EMDB EMD-12742 associated EM volume

Mitochondrial NADH:ubiquinone oxidoreductase Mitochondrial NADH:ubiquinone oxidoreductase 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 Yarrowia lipolytica GB30 1 NADH-ubiquinone oxidoreductase 78 kDa subunit Yarrowia lipolytica 0.07908807799999999 1 LEVO MLSRNLSKFARAGLIRPATTSTHTRLFSVSARRLAEIELTIDGHKVSIEAGSALIQACEKAGVTVPRYCYHDKLAIAGNC RMCLVDVERAPKPVASCAYPVAPGMVVRTDTERVKQARENVMEMMLQNHPLDCPVCDQGGECDLQDQSMRYGRDRGRFTE ITGKRSTEDKNIGPLVKTSMNRCIHCTRCVRFANDIAGAPELGSSGRGNDMQIGTYLEKNLNTELSGNVIDLCPVGALTN KPYAFRARPWELKKTESIDVMDAVGSNIRIDSKGVEVMRVIPRVHEDVNEEWINDKSRFACDGLKTQRLTTPLIRVGDKF VNATWDDALSTIAKAYQQKAPKGDEFKAVAGALVEVESMVALKDMTNALGSENTTTDTPNGNSAPAHGITFRSNYLFNSS IAGIEDADAILLVGTNPRREAAVMNARIRKAWLRQELEIASVGPTLDATFDVAELGNTHADLEKALSGEFGEVLKNAKNP LIIVGSGITDREDAGAFFNTIGKFVESTPSVLNENWNGYNVLQRSASRAGAYDIGFTPSDEASKTTPKMVWLLGADEVAA SDIPADAFVVYQGHNGDVGAQFADVVLPGAAYTEKAGTYVNTEGRSQISRAATGPPGGAREDWKILRAVSEYLGVALPYE DAYEVRDRLAEISPSLVRYDLVEPTVFGDVAVQHSLVGPNGSVTPSSAPLTETIENFYMTDSISRSSPTMAKSSIAFNKD NKKNQAFA Q9UUU3 1.6.99.3 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial Yarrowia lipolytica 0.053829508 1 LEVO MLRTTLHKRGLARLSRGFATTQDATPKARQYGGLKDQDRIFQNLYDNYGWDLASARKQGDWYKTKELILKGDTWIIDEIK KSGLRGRGGAGFPSGLKWSFMNPPGWEKNEGPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLLAGRAMNATAAYIYI RGEFYNEAAVLQTAINEAYAAGLIGKDACGSGYDFDVYIHRGMGAYVCGEETSLIESLEGKAGKPRLKPPFPAGVGLFGR PSTVTNVETVAVAPTILRRGGDWFASFGRERNSGTKLFCISGNVNEPCTVEEEMSIPLRELLEKHCGGIKGGWDNLLGVI PGGCSVPILPKNICEDVLMDFDALKDVQSGLGTAAVIVINKQQDVIRAIQRFAAFYKHESCGQCTPCREGTTWLLKAMDR FRTGQAKEREIDMLYELTKDIEGHTICALGDAAAWPIQGLIRNFRPEMETRMKKFHDEVGAVSVGGWMKDARVEKGKVVG APLPGVHH Q9UUU2 7.1.1.2 NUCM protein Yarrowia lipolytica 0.052521949 1 LEVO MLRSAAARAVRAVRPRLSARYMATTALPQDPIPSGALGQKVPHVDESHQDLLFRTSHMVEDLETYDEDSPINTSDANTRI RAFTINFGPQHPAAHGVLRLILELSGEEIIRSDPHVGLLH(2MR)GTEKLIEYKTYMQALPYFDRLDYVSMMTNEQVFSL AVEKLLNVEVPLRGKYIRTMFGEITRVLNHLMSVCSHAMDVGALTPFLWGFEEREKLMEFYERVSGARLHAAYVRPGGVS QDLPAGLLDDIYMWATQFGDRLDEIEELLTDNRIWKLRTVNIGTVTAQDALNLGLSGPMLRGSGIPFDIRKNAPYDAYDK VDFDVPVGMNGDCYDRYLIRMAEFRQSLRIIEQCCNDMPAGAVKVEDFKINSPPRNLMKEDMEALIHHFLLYTKGYSVPP GETYTAIEAPKGEMGVYVVSDGSERPYKCKIRAPGFAHLGAFDHIARGHFLPDAVAIIGTMDLVFGEVDR Q9UUU1 1.6.99.3 Subunit NUGM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.032389568 1 LEVO MLSRFARIGSMGIRPVAAARATFVTSARAAQAAPSWENIKDIRLDPKVHVDEVYEPIVNPADRYLQHVSDLHQYAKYIMA ALPKYIQGFSVWKDELTLHVAPSAVIPVTTFLRDNTSTQYKSIIDITAVDYPSRENRFEVVYNFLSVRHNSRIRLKTYAT EVTPVPSITCLYEGANWFEREAYDMYGVFFEGHPDLRRIMTDYGFEGHPLRKDFPLTGYTEVRWDEEKRRVVYEPLELTQ AFRNFSAGSTAWEPVGPGRDDRPDSFKLPTPKPEEKEGDKK Q9UUU0 1.6.99.3 Subunit NUHM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.027247401999999997 1 LEVO MLRLIRPRLAALARPTTRAPQALNARTHIVSVHRNTENNNPSIPFEFSPENMKRAEEVIAKYPPQYKKAAVMPLLDIGQR QLGYTSISVMNYVAKLLEMPPMRVYEVATFYTMYNRTPMGRYHLQICTTTPCQLCGSDGIMEAVQNTLNIKPGETTKDNL FTLSEVECLGACVNAPMMAINDDYYEDLTPEGTVKLLEDCKAGKMPTPGPENHVRRDCEPASGQKVLLSKEPHNVADFLQ EGI Q9UUT9 1.6.99.3 Subunit NUIM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.025682305 1 LEVO MLSLVRPAVTRSILRGAPGSMRLLSSTARLHAPATDSAINIYAGGSAAAAPPAGFRIHRPATWEESEEGALSKATKYFLL AEMFRGLYVVLEQFFRAPYTIYYPFEKGPVSPRFRGEHALRRYPSGEERCIACKLCEAICPALAITIDAEERIDGSRRTT KYDIDMTKCIYCGYCQESCPVDAIVETPNVEYATETREELLYNKEKLLANGDKWELELQYALDADAPYR Q9UUT8 1.6.99.3 Subunit NUKM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.023455175999999998 1 LEVO MLRSQIGRLALRPTLVPATVIPQTRAYSAPAGTPRVSSSSMPTDFPLPSQQKPNSAVDYTLTTLDAVANWARQGSFWPVT FGLACCAVEMMHVSAPRYDQDRLGIIFRASPRQSDIMIVAGTLTNKMAPVLRQVYDQMPEPRWVISMGSCANGGGYYHFS YSVVRGCDRIVPVDVYVPGCPPTSEALMYGVFQLQRKMRNTKITRMWYRK Q9UUT7 1.6.99.3 NADH-ubiquinone oxidoreductase chain 4L Yarrowia lipolytica 0.00984386 1 LEVO (FME)FIGTIILVLSFLGFVFNRRNIILAFICLETMLLGINLILLRNSVLFDDISGSLFAIVIIILAGVESAIGLSLLVS YYRLRGVINSYGI S5U4U1 7.1.1.2 Subunit NESM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.028479940999999998 1 LEVO MLKLHYRNFITAQHSTTNTTPTMIASVCKRAGLRAGPRAYPGVRQFALRAYNEEKELALKQRLSQLPPPGKAFVTAEGEP RPAKEAELAELAEIAALYKTDRVGILDILLLGNKHARLYRDNTALLKDYYYNGRRILDKIPVKDKQTGKVTWEIKREGAE KEDWVNQMYFLYAPSLILLLIVMVYKSREDITFWAKKELDQRVLDKHPEINDAPENERDALIVERIIAGDYDKLASLQKK ATPTPATLI Q6ZY23 1.6.99.3 Subunit NB5M of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.010494884999999999 1 LEVO MVELKPSSAIQRGPLNKGGWDAPHALHNDGAIDRYAHWRTFYQERFKYTRATGKSTLIFLVAFPALIGYVAYQSEGLFEF AGKRRGESVTTRG Q6ZY24 1.6.99.3 NADH-ubiquinone oxidoreductase chain 1 Yarrowia lipolytica 0.038389277 1 LEVO (FME)IINIVEILIFLVCVLFSVAYLTVAERKTLAYMQRRLGPNFVGYYGLLQAFADAVKLLLKEIVLPKESNYIILVIS PLITLITALIGWVVIPLGPGITLGELNLGILFSLAIGSLGVFGSLLSGWSSNSKYSLLGSIRSTAQLISYELILTSIFII IIMFVSSLNITTIIETQRVVWYCIPLLPLLLIFFIASVAETARPPFDLTESESELVAGYFTEYSGSPFVFFFLAEYSNII LISAFNGYLLLGGYLSFNYSYLFNILFNDYSYVSFLFEGLINSSAYAIKLVFLMFSFIWVRAAFPRFTYDNLINFCWIIL LPLLFGIFLIIPSTLYIFDSFPTLI S5U3V2 7.1.1.2 NADH dehydrogenase subunit 2 Yarrowia lipolytica 0.053381367 1 LEVO (FME)LILAIISLITFVSMSKLSDNRAIIRLINIYLILVLVLDSFLYLLFLNNQTYTVMGELLIFNSFTFYIDMLIYFIM IVISSLYGYNLYNNNLYKTLFEPKKELIILFLINILGALLIVHSNDFITLFVAIELQSYSIYLITAIYNSSYKASKASML YFFMGGILSILIAYSINTYYSVLNSYTLHSLDSLIINTLDLNLILIALSLGLLFKIGIAPLHKWLISIYENTPILITIYI SLIPKISILSYLVLSNISINSLVISILAILTLLVGSVGGLLQIKIKRLLAFSGLTNAGYMMLLLLLNNNEFSYLYYITQY SISHLAIFMIIIFSIYYINYINNQYNPIIYVNQLKGLIHDNAYLVLSMAIVVFSFIGIPPLLGFFGKLNILMSILNNGYY FISIVLIVASLISALYYLYLLNVSIQDKNNILINSNETVSSVLSYILSSLIILITFGFIYNSLIIDIFNVYFN S5U4R9 1.6.5.3 NADH-ubiquinone oxidoreductase chain 3 Yarrowia lipolytica 0.014506339 1 LEVO (FME)NTFIIFIILIPIVGFALLAVNILLAVYKPYNEKLGAFECGLTSFNQTRLAFNAAFILVAILFLPFDLEISTLLPY VMSIYLVSNYGFTIVLLFLLILIIGFVYEINTNALKINKHNKPNTDSLIYKL S5TMS4 7.1.1.2 NADH-ubiquinone oxidoreductase chain 4 Yarrowia lipolytica 0.054534651999999996 1 LEVO (FME)FLTSILLSSLYLFNRILAWQGNVKHFYLFASNLLLLFIVVLYINFNTFSNSFQFNFELFNSLNPFGLSNSDISNG LLFGIDGLSLTFILLTVLLIPLTLLGNWYNINFNSNLYYTLVLAIGLVILLNFWALDYISFYILFEATLPLLFILIHIYG SSDSERASFYVLMFTLSGSLFMLLSIVVISIVLNTTNFINHNLFVLSLDLQTIIWLGLFIAIMVKTPLFPIHVWLPVVHS ESPLAGSMILAGLILKLALYAILRLLLPLLCEAQILYTPMIYIISLLTIILTSLATLRQIDLKVIIAYSSISHMGIAILG VCSNTSLGIYGSIVLGVAHGFVSPALFLIVGGILYDRYHIRIVNYYKGLTTYMPQLATYIIILSFANIGTPLTGNFTGEF LSLQGGFIRNPIIGGISCISVLLAAIYQLKLTNKLTGGISSIYMHRTNDVTIREKFIMNILIISTLIIGICPQIMYNLLY WTVNNYIYII S5TMP9 7.1.1.2 NADH-ubiquinone oxidoreductase chain 5 Yarrowia lipolytica 0.07376870299999999 1 LEVO (FME)YNAISLIIILPCISWLFPLFFGRQLGYVFVTRMTSTLIIITTLITYYYFYQLLGNNNPINLELFNYLNIDYLDIN YNFEIDALTITMLLAITTISSMVHIYSIGYMETDPHQVRFFSLLSMFTFWMIILVTGSNYFVLFVGWEFIGVTSYLLISF WVTRLQAMKSALSAVLMNRFGDAFFVLGLCVIAYVFGTLNYSTIFATAYLINTDLLVLIMLALFIAAMAKSAQFGLHNWL TLAMEGPTPVSSLLHAATLVTAGIYLLLRSANILEYTPTVLFIILWIGALTTLSAGLIAICSNDLKRIIALSTMSQLGMM TIAIGLSAYNLALFHLLGHAFFKALLFMSAGSIIHSILNESQDIRTYGGLLSYLPYTYICITIASLSLMAMPGLTGYYTK DIIIESTYGSYSISNYVVYWIAYLSAVLTCVYSMKILYLTFYSNPNNNTITYYNAHESNIYITLPMFILAIFAMFAGWIL KDIYLGVGTDFVGTHILPNNFSYFDTEFSITQFYKLLPLISAILVSILIVVLNEFFAIVFNLNNKYINTVYSIFNQKLVS DQILNHFIIFKGLVTSGNIAHHVDKGSLYRLGPVGINRLLNKASYNVINLSSNTRSSLSMNSMLILITIVSLLLLVLVMN VNFIIVIPVLISILYILFS S5TF58 7.1.1.2 NADH-ubiquinone oxidoreductase chain 6 Yarrowia lipolytica 0.020793111 1 LEVO (FME)MYLTYYFIEITIFLAILCTIFIISAKNPMVSILYMIALFVIAAMYLYLIGLGIFSLLYIMIYIGAIAVLFLFIIT LLDINSTELSVKSNIRDLPLVLISLIVLTISGLMIYSNDSILINKLLEAFGNDYNTIITQDWFNIENTTLLTTIGNVLLT NNAFILLVLAIVLLLGIIGPISITMKHKE S5U3X7 7.1.1.2 subunit NI9M of protein NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.008992229 1 LEVO MINANPGFWNGPFRYLRWSAHNRPHLFFAFAIGIAGPVAALTLTPLRRKYLYPDHSPLPQSYPLPQRAREQLTGFDDE A0A1D8NJR0 Subunit NIMM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.009806237999999998 1 LEVO MAIPFEALLPYGIIFGLLTAGGGAMQVLHVYRNGGVRDRFAIDQWDSQMMERDLRLNGGQGRKQVDQATAPEAFKHNHVW KSERPLI A0A1D8NC63 NADH-ubiquinone oxidoreductase 40 kDa subunit Yarrowia lipolytica 0.042765738 1 LEVO MLRTTRAVKPLKAITTSVRFMNSFENLAQDVNITRSGKTLIAKGTGGRSSRTGYTATVFGANGFLGSYLTAKLAKHGTTV VVPYREEMAKRHLKVTGDLGVVNFLEMDLRNLESIDEAVRHSDIVVNLIGREYETKNFNYYDVHVEGARRIAEAVKKHNI ARYIHVSAFNAEIDSPSEFNHTKGLGEQVTKDIVPWATIVRPAPMFGREDKWFLDRMARSPCLVSANKFQETSNPVHVID VAAALERICFDDSTVAQTFELYGPQKFTQKQIIDMVSETLRKEVRHIELPKALYQAYTKATQAIWWPTYSPDQVERQFLS QKIDPSAKTFNDLDLTPMELPDLMFKLIRPYRVNTFQHDVSQLENKEKTFVHILD A0A371BY45 Subunit NUFM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.016657919999999996 1 LEVO MRYTQLLRNVSKGVQKSGQSVLVQMREGTPIGLTGIYQHPNPRPALIALYEATLKELQDKHPKDSVYRQSIENLTAHRKQ IVEDNEVSEVIENKIGAGLIEEVVIQAHEELELAKKMSEWKPWEELEEKPLEDQWVYFNKKGVE A0A371C5F3 Subunit NUJM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.020849550999999997 1 LEVO MSEHVHLPSPTFNTSSAGHFHPYNTLGLATQSAMVGLGAGVVAAAARNSLATGPRNILTTFSKSGGVVTIFTGASIAYVF TYCSAANLRERKDGWNHMWAGAATGAVLGARTKLVPAFIGWTVLCGAACGLFGWTGARFNADRKASLEQSPKGFVQEDAH QTFWEVVHRRPLSLTVEQLGEGRGINAVPIATATEAPN A0A371CB65 Subunit NUMM of protein NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.01514897 1 LEVO MLSRFVSKRAFSVSTQVSKSIISYNGNTIEIPEEYTKQAPNRDSTWAPAQASKTEIYKNNMVRFEQKDLSKQPMPYAGIE LIAQQPVRFVHGNTAVCDGANHNGPGAQGHPKIFINVDAPGSHACQYCGTRYEKEH A0A1H6Q8Z5 Acyl carrier protein ACPM1 of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.012053584999999999 1 LEVO MLRNVSRLALRSNFARQATMGQRFYSVARPDAEKRIAAVLESFDKISNPAAITPTASFAKDLNLDSLDTVEVVVAIEEEF GIEIPDKEADEIKSVNQAVEYILAQPDAK A0A1H6PXT9 Subunit NB4M of protein NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.014778817999999999 1 LEVO MAIIATAFAETVKFSGSKQELQKRTLALYRQFLRGAPTFADLYEVQFSIPTIRTKIRQEFERHRFVDDLSIQNVLYAKGH MEYQECINFWKQQAQFLKYFPEEDDIQGRHQPSNFVDKFLKNRA A0A1D8N3C8 Acyl carrier protein ACPM2 of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.014444458 1 LEVO MLRQSVLRLSRAAVARPALSRSFVTAVARPQLVRAAPVSFIRHYSSAHVLTKDMIQERIVALLESFDKVNDAKNITATAN LTSDLGLDSLDVVEVVMAIEEEFGLEIPDHDADEIKTVQQAIDYVSAQPAAV A0A1D8NG21 Subunit NI2M of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.01290287 1 LEVO MSHPVPFSAANKKLVTSMYRQSLKLARNWISNRQLFRQKAVEIRHKFDQNAQISNPRLLARTLDETRAHLYEFRHPDPIV PPSFPGGTKYERNVPPRMEKIMQHNLYEP A0A1D8NDL1 Subunit NUPM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.019355196999999998 1 LEVO MPREAAAHWVPFEDKANMPDNVPDVVEVGATSAPLLSASYFIGAKCKPYNDDFMLCREESQGSGAIDCLKEGRRVTRCAV SVIEDINKSCLDEFRLHWQCLEQNNHQLSGCRKAEALLNKCVFTKLNLEKKIPGLRPDEEPVFLKKDPWIKPAVDDFKSV RAYAEAKKNGTL A0A371C2D0 Subunit NB6M of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.014112429 1 LEVO MPSVGQDLPPVGGYEPVQWRRNLPARGFRPLVYLAALCGICGYGFYRALGGIQERRELKREKLWARIYLMPLLQAEEDRQ TVRRSIAQLEREKEIMKGTGFDVDKSVYNDGKFHAPALMIPPK A0A1H6PPE5 Subunit NUXM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.018588208999999998 1 LEVO MSSSTPLVKTSVNYSYGDYPLIDADPHFKRVVGYMRPSDYGVIGLATAALPAGICFAEWLDPVKGKFARPSVKFLRVATM LGFAVGFGAAYARSSLRFFGVTENAREYKKDEAQMAARKAAGLEPYGTSSLTPELQEIAAKNSAHSIAGLFIFPWFNFVN HPYHGREQK A0A1D8NKB4 Subunit NUYM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.018656080000000002 1 LEVO MLSRSLRQLSQPSVRSFATSARLLQKKDVPEVGVNLDNVPAHEIVSGAPAELSRNRVVRIYQQAKPATQSGEYGTFAWRL DWDIVDVANRWENDLIGWQSSGDYMQATQMKFTSKESAIKFANKQGWDFYIQEPHHRKFRVKQYANNFVHSYGKLKHIRT K A0A1D8N7X0 Subunit NUZM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.019772525 1 LEVO MLPGGPVPVFKKYTVGSKGIWEKLRVLLAIAPNRSTGNPIVPLYRVPTPGSRPEANVYQDPSSYPTNDIAENPYWKRDHR RAYPQTAFFDQKTVTGLLELGSEATPRIADGEAGTKALANIANGGVSFTQALGKSSKDVIYGEVLTVNGLPPVAPTLAPK QWKIIEGEAAIYPKGYPCRTFH A0A1D8N3H5 Subunit NIAM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.017328523000000002 1 LEVO MLSRRAVTMLRSPVARVAQVQVRGIRASFDKAEEPMLGDYPDIDPFPAQLKNPYKKYDDQQDRRNLEEPLSVNDDLYDMW SPDRFTHFKNQDALKYFIGFLTIFFGASYVATYFVPEKAAIPREFPYEGLWKESGGTEKSKAFFGQRSE A0A1D8ND94 Subunit NEBM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.008059366 1 LEVO MALFTSLVGASGLGFATKFLSNKIRLKPAGYYPLGYVFSGVAWAGLGLVLHNVHQHSLEVLEKKKTALSEQRTE A0A1D8NGI5 Subunit NB2M of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.006948902 1 LEVO MAPQLKDPWARREAWRYQTNFTRANRFKGAAPGFGIAVVAFGAYLAAEKFLFEKKDDHHH A0A371C0F2 Subunit NIDM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.011039275999999999 1 LEVO MSEHQRPELVSFDDINYNDHKKVREAQESYTREQFIRLEALKTVRKALEKCYEESGPNHFEDCKNLAEQYLDMLPTHRLQ GYLGYQRNDPSK A0A1D8N596 Subunit NUVM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.007807067 1 LEVO MAGHHTNYKWNGPLPRPHVSAGHRIATKFLGATMFFWMFLRIKEEYPAMLGLHNFYPPKEGEKAVEH A0A1D8NFX6 Subunit NI8M of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.009621050999999999 1 LEVO MSAALREIRFHLCQNGSSSAPLRQFVKNQIGAFQKANPSTKVLVREANGVKPIVFARFDHGHESKIGLDVSSEKEVAERV KSLIEAK A0A1H6PJS3 Subunit N7BM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.016175141 1 LEVO MSSSLYRVLRNAWEVGPRSYWKQLNSIGDTKSGRLVGTDIYGNKFYETDHQDEIHLRTRYVEYKEKDYDMSQVEPGWHFW LGYGVDTAPCNTPKEKLPIRAYPYKFQPNYTGTPGAFVTYNTLKPKISAWEPVTKQRS A0A1D8N5V2 Subunit NUUM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.009793966 1 LEVO MGGGRYPFPKDVISMTGGWWANPSNWKLNGLFATGIAVGLALWVSTATLPYTRRREGITSESDISKWNAAAGVWRERHGK ISTGEAAESE A0A1H6Q311 Subunit NUNM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.013523068 1 LEVO FGSHGHGPELTPAVPFFQPYVLKWAGVSLGLVAFYQFNSSYEAKNGHTWVETFFHPKSREDILNEEAKIVQALNNQRELT IKMHELKREEKDYAHSYSPLFSDPVPQGGSIGKAPGSSRE A0A371CFV9 Subunit NB8M of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.011219027 1 LEVO MAEFPPLLSQEDMKKHKILLAYRDRCAALLVPLNECRKKNYYMPWACGHERHEYEMCEVADFQRRVKAMDKLKAEKIEQA KAAAAAAAAAAAADAEESK A0A1H6PKH9 Subunit NIPM of NADH:Ubiquinone Oxidoreductase (Complex I) Yarrowia lipolytica 0.010035651 1 LEVO MTAAGISLTGGRNRCFSEWQSFMHCTAKTDAKSRAQCLPNFEDYMECLHHTKEKARLREIESVLKQKKEGLEAPPVKVIP VKAIGLVEE A0A1D8NNZ0 IRON/SULFUR CLUSTER 0.00035163999999999996 6 SF4 FE2/S2 (INORGANIC) CLUSTER 0.00017581999999999998 2 FES FLAVIN MONONUCLEOTIDE 0.00045634399999999997 1 FMN DIUNDECYL PHOSPHATIDYL CHOLINE 0.000622834 6 PLC 1,2-Distearoyl-sn-glycerophosphoethanolamine 0.000748065 18 3PE Lauryl Maltose Neopentyl Glycol 0.001005188 2 LMN Phosphatidylinositol 0.000887128 3 T7X 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 0.00075806 1 CPL CARDIOLIPIN 0.0014640429999999997 6 CDL NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 0.000745421 1 NDP ZINC ION 6.5409e-05 1 ZN S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate 0.000568704 2 ZMP water 1.8015e-05 1616 HOH singleParticle particle 1.5 7.2 20.0 Tris 100.0 NaCl sodium cloride 1.0 EDTA 0.025 LMNG ETHANE 80 283 FEI VITROBOT MARK IV FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 -0.8 -2.2 165000.0 96899.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GIF Bioquantum 30 GATAN K3 (6k x 4k) COUNTING 21770 3.0 50.0 1 1078960 Gctf PHASE FLIPPING AND AMPLITUDE CORRECTION EMD-4873 C1 2.4 FSC 0.143 CUT-OFF RELION 3.1 178960 MAXIMUM LIKELIHOOD RELION 3.1 MAXIMUM LIKELIHOOD RELION 3.1 3 RELION 3.1 emd_12742.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 0 0 0 600 600 600 309.59998 309.59998 309.59998 90.0 90.0 90.0 X Y Z -0.044632785 0.10371717 0.000091163434 0.0034132805 0.516 0.516 0.516 0.016 AUTHOR ::::EMDATABANK.org::::EMD-12742:::: complex I map postprocessed in relion (2.4 angstrom resolution) 6RFR PDB experimental model OTHER REAL 30.0 emd_12742_msk_1.map emd_12742_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 0 0 0 600 600 600 309.59998 309.59998 309.59998 90.0 90.0 90.0 X Y Z -2.8099484 4.512206 0.000013828581 0.08667379 0.516 0.516 0.516 AUTHOR ::::EMDATABANK.org::::EMD-12742:::: complex I map after density modification by resolve_cryo_em emd_12742_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 0 0 0 600 600 600 309.59998 309.59998 309.59998 90.0 90.0 90.0 X Y Z -0.0406955 0.05870502 0.00009111845 0.0049306257 0.516 0.516 0.516 AUTHOR ::::EMDATABANK.org::::EMD-12742:::: half map 2 emd_12742_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 0 0 0 600 600 600 309.59998 309.59998 309.59998 90.0 90.0 90.0 X Y Z -0.042075038 0.058791105 0.00009120835 0.004927626 0.516 0.516 0.516 AUTHOR ::::EMDATABANK.org::::EMD-12742:::: half map 1