2024-11-06 REL PDBe PDBe PDBe 2021-02-13 2021-12-01 2021-12-01 2024-11-06 Wellcome Trust 200835/Z/16/Z United Kingdom Medical Research Council (MRC, United Kingdom) MR/R009945/1 United Kingdom Medical Research Council (MRC, United Kingdom) MR/K000241/1 United Kingdom Keown JR Carrique L Influenza, RNA polymerase, H1N1, 1918, VIRAL PROTEIN, nanobody Keown JR Zhu Z Carrique L Fan H Walker AP Serna Martin I Pardon E Steyaert J Fodor E Grimes JM Nat Commun UK 13 251 251 2022 35017564 doi:10.1038/s41467-021-27950-w 2041-1723 7nis FULLOVERLAP 1918 Influenza virus polymerase heterotirmer in complex with vRNA promoters and Nb8192 1918 Influenza virus polymerase heterotirmer in complex with vRNA promoters and Nb8192 0 1 2 3 4 5 6 Polymerase acidic protein, RNA-directed RNA polymerase catalytic subunit, Polymerase basic protein 2 1 2 3 4 Influenza A virus (strain A/Brevig Mission/1/1918 H1N1) RNA 1 5 6 Influenza A virus (strain A/Brevig Mission/1/1918 H1N1) Nanobody8192 core 1 1 Camelidae mixed library Nanobody8192 core Camelidae mixed library 0.014537075 1 Escherichia coli LEVO QVQLQESGGGLVQAGASLRLSCAASGRTFMGWFRQAPGQEREFVAAIDAFGINTYYADSAKGRFTISRDSAKNTVYLQMN SLKPEDTAVYYCAATLRGTQPGAVMQWRPDYWGQGTQVTVSSHHHHHHEPEA Polymerase acidic protein Influenza A virus (strain A/Brevig Mission/1/1918 H1N1) A/Brevig Mission/1/1918 H1N1 0.082707391 1 Spodoptera frugiperda LEVO MEDFVRQCFNPMIVELAEKAMKEYGEDLKIETNKFAAICTHLEVCFMYSDFHFINERGESIIVESGDPNALLKHRFEIIE GRDRTMAWTVVNSICNTTGAEKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKAD YTLDEESRARIKTRLFTIRQEMASRGLWDSFRQSERGEETIEERFEITGTMRRLADQSLPPNFSSLENFRAYVDGFEPNG YIEGKLSQMSKEVNARIEPFLKTTPRPLRLPDGPPCSQRSKFLLMDALKLSIEDPSHEGEGIPLYDAIKCMRTFFGWKEP NVVKPHEKGINPNYLLAWKQVLAELQDIENEEKIPKTKNMKKTSQLKWALGENMAPEKVDFDDCKDVSDLKQYDSDEPEL RSLASWIQSEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEVSHCRATEYIMKGVYINTALLNASCAAMDDF QLIPMISKCRTKEGRRKTNLYGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLLRSAIGQVSRP MFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAESSVKEKDMTKEFFENKSETWPIGESPKGVEEGSIGKVCRTL LAKSVFNSLYASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWVLLNASWFNSFLTHALR Q3HM39 3.1.-.- RNA-directed RNA polymerase catalytic subunit Influenza A virus (strain A/Brevig Mission/1/1918 H1N1) A/Brevig Mission/1/1918 H1N1 0.086625211 1 Spodoptera frugiperda LEVO MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGRWTTNTETGAPQLNPIDGPLPEDNEPS GYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANES GRLIDFLKDVMESMDKEEMEITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRSYLIRALTLNTMTKDAERGKLKRRA IATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSFTITGDNTKWNENQNPRMFLA MITYITRNQPEWFRNVLSIAPIMFSNKMARLGKGYMFESKSMKLRTQIPAEMLASIDLKYFNDSTRKKIEKIRPLLIDGT ASLSPGMMMGMFNMLSTVLGVSILNLGQKRYTKTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLLGINMSKK KSYINRTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLGPATAQMALQLFIKDYRYTYR CHRGDTQIQTRRSFEIKKLWEQTRSKAGLLVSDGGPNLYNIRNLHIPEVCLKWELMDEDYQGRLCNPLNPFVSHKEIESV NNAVMMPAHGPAKNMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVS RARIDARIDFESGRIKKEEFAEIMKICSTIEELRRQK Q3HM40 2.7.7.48 Polymerase basic protein 2,Immunoglobulin G-binding protein A Staphylococcus aureus 0.10237721899999999 1 Spodoptera frugiperda LEVO MERIKELRDLMSQSRTREILTKTTVDHMAIIKKYTSGRQEKNPALRMKWMMAMKYPITADKRIMEMIPERNEQGQTLWSK TNDAGSDRVMVSPLAVTWWNRNGPTTSAVHYPKIYKTYFEKVERLKHGTFGPVHFRNQVKIRRRVDINPGHADLSAKEAQ DVIMEVVFPNEVGARILTSESQLTITKEKKEELQDCKISPLMVAYMLERELVRKTRFLPVAGGTSSVYIEVLHLTQGTCW EQMYTPGGEVRNDDVDQSLIIAARNIVRRATVSADPLASLLEMCHSTQIGGIRMVDILRQNPTEEQAVDICKAAMGLRIS SSFSFGGFTFKRTSGSSVKREEEVLTGNLQTLKIRVHEGYEEFTMVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIV AMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEPIDNVMGMIGILPDMTPSTEMSMRGVRV SKMGVDEYSSTERVVVSIDRFLRVRDQRGNVLLSPEEVSETQGTEKLTITYSSSMMWEVNGPESVLVNTYQWIIRNWETV KIQWSQNPTMLYNKMEFEPFQSLVPKAARGQYSGFVRTLFQQMRDVLGTFDTVQIIKLLPFAAAPPKQSRMQFSSLTVNV RGSGMRILVRGNSPVFNYNKATKRLTVLGKDAGALTEDPDEGTAGVESAVLRGFLILGKEDRRYGPALSINELSNLAKGE KANVLIGQGDVVLVMKRKRDSSILTDSQTATKRIRMAINENLYFQGELKTAALAQHDEAVDNKFNKEQQNAFYEILHLPN LNEEQRNAFIQSLKDDPSQSANLLAEAKKLNDAQAPKVDNKFNKEQQNAFYEILHLPNLNEEQRNAFIQSLKADPSQSAN LLAEAKKLNGAQAPKVDANSAGKST Q3HM41 P38507 RNA (5'-R(P*GP*GP*CP*CP*UP*GP*CP*U)-3') Influenza A virus (A/Brevig Mission/1/1918(H1N1)) 0.005335125 1 GGCCUGCUUUUGCUAUU RNA (5'-R(P*AP*GP*UP*AP*GP*AP*AP*AP*CP*AP*AP*GP*GP*CP*C)-3') Influenza A virus (A/Brevig Mission/1/1918(H1N1)) 0.004862017 1 AGUAGAAACAAGGCC singleParticle particle 0.3 7.5 166.0 NaCl Sodium chloride 25.0 NaSCN Sodium thiocynate 20.0 HEPES-Na Hepes 0.005 Tween-20 Tween-20 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 FEI FALCON III (4k x 4k) INTEGRATING 51.8 1 5.96 FSC 0.143 CUT-OFF cryoSPARC 2.15 43976 RANDOM ASSIGNMENT cryoSPARC 2.15 MAXIMUM LIKELIHOOD 7HNA PDB experimental model RIGID BODY FIT REAL