2024-05-01 REL PDBe PDBe PDBe 2021-02-10 2021-05-05 2021-05-05 2024-05-01 German Research Foundation (DFG) WI3285/8-1 Germany Swedish Research Council 2017-03783 Sweden Swedish Research Council 2019-01085 Sweden European Regional Development Fund 2014-2020.4.01.15-0013 Sweden Estonian Research Council PRG335 Estonia Swedish Research Council 2018-00956 Sweden Crowe-McAuliffe C Murina V Antibiotic resistance element, ABCF, antibiotic resistance, ATPase, protein synthesis, RIBOSOME Crowe-McAuliffe C Murina V Turnbull KJ Kasari M Mohamad M Polte C Takada H Vaitkevicius K Johansson J Ignatova Z Atkinson GC O'Neill AJ Hauryliuk V Wilson DN Nat Commun UK 12 3577 3577 2021 34117249 doi:10.1038/s41467-021-23753-1 2041-1723 7nhl FULLOVERLAP VgaA-LC in complex with 70S ribosome, mRNA, and distorted P-tRNA from Staphylococcus aureus VgaA-LC in complex with 70S ribosome, mRNA, and distorted P-tRNA from Staphylococcus aureus 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 2.2 70S ribosome 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 Staphylococcus aureus subsp. aureus NCTC 8325 VgaA-LC 1 1 Staphylococcus haemolyticus Lincosamide-streptogramin A resistance protein Staphylococcus haemolyticus 0.063265316 1 Staphylococcus aureus subsp. aureus NCTC 8325 LEVO MKILLEGLHIKHYVQDRLLLNINRLKIYQNDRIGLIGKNGSGKTTLLHILYKKIVPEEGIVKQFSHCELIPQLKLIESTK SGGEVTRNYIRQALDKNPELLLADQPTTNLDNNYIEKLEQDLKNWHGAFIIVSHDRAFLDNLCTTIWEIDEGRITEYKGN YSNYVEQKELERHREELEYEKYEKEKKRLEKAINIKEQKAQRATKKPKNLSSSEGKIKVTKPYFASKQKKLRKTVKSLET RLEKLERVEKRNELPPLKMDLVNLESVKNRTIIRGEDVSGTIEGRVLWKAKSFSIRGGDKMAIIGSNGTGKTTFIKKIVH GNPGISLSPSVKIGYFSQKIDTLELDKSILENVQSSSQQNETLIRTILARMHFFRDDVYKPISVLSGGERVKVALTKVFL SEVNTLVLDQPTNFLDMEAIEAFESLLKEYNGSIIFVSHDRKFIEKVATRIMTIDNKEIKIFDGTYEQFKQAEKPTRNIK EDKKLLLETKITEVLSRLSIEPSEELEQEFQNLINEKRNLDKGGDYKDHDGDYKDHDIDYKDDDDK A0SNL9 P-tRNA fMet Staphylococcus aureus subsp. aureus NCTC 8325 0.024506611 1 GCGGGGUGGAGCAGUCAGGUAGCUCGUCGGGCUCAUAACCCGAAGGUCGUAGGUUCAAAUCCUGCCCCCGCAACCA 50S ribosomal protein L27 Staphylococcus aureus subsp. aureus NCTC 8325 0.010334798000000001 1 LEVO MLKLNLQFFASKKGVSSTKNGRDSESKRLGAKRADGQFVTGGSILYRQRGTKIYPGENVGRGGDDTLFAKIDGVVKFERK GRDKKQVSVYAVAE Q2FXT0 50S ribosomal protein L16 Staphylococcus aureus subsp. aureus NCTC 8325 0.016274049 1 LEVO MLLPKRVKYRRQHRPKTTGRSKGGNYVTFGEFGLQATTTSWITSRQIESARIAMTRYMKRGGKVWIKIFPHTPYTKKPLE VRMGAGKGAVEGWIAVVKPGRILFEVAGVSEEVAREALRLASHKLPVKTKFVKREELGGETNES Q2FW13 23S rRNA Staphylococcus aureus subsp. aureus NCTC 8325 0.946696688 1 GAUUAAGUUAUUAAGGGCGCACGGUGGAUGCCUUGGCACUAGAAGCCGAUGAAGGACGUUACUAACGACGAUAUGCUUUG GGGAGCUGUAAGUAAGCUUUGAUCCAGAGAUUUCCGAAUGGGGAAACCCAGCAUGAGUUAUGUCAUGUUAUCGAUAUGUG AAUACAUAGCAUAUCAGAAGGCACACCCGGAGAACUGAAACAUCUUAGUACCCGGAGGAAGAGAAAGAAAAUUCGAUUCC CUUAGUAGCGGCGAGCGAAAUGGGAAGAGCCCAAACCAACAAGCUUGCUUGUUGGGGUUGUAGGACACUCUAUACGGAGU UACAAAGGACGACAUUAGACGAAUCAUCUGGAAAGAUGAAUCAAAGAAGGUAAUAAUCCUGUAGUCGAAAAUGUUGUCUC UCUUGAGUGGAUCCUGAGUACGACGGAGCACGUGAAAUUCCGUCGGAAUCUGGGAGGACCAUCUCCUAAGGCUAAAUACU CUCUAGUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGUGAAAAGCACCCCGGAAGGGGAGUGAAAUAGAACCUGAAA CCGUGUGCUUACAAGUAGUCAGAGCCCGUUAAUGGGUGAUGGCGUGCCUUUUGUAGAAUGAACCGGCGAGUUACGAUUUG AUGCAAGGUUAAGCAGUAAAUGUGGAGCCGUAGCGAAAGCGAGUCUGAAUAGGGCGUUUAGUAUUUGGUCGUAGACCCGA AACCAGGUGAUCUACCCUUGGUCAGGUUGAAGUUCAGGUAACACUGAAUGGAGGACCGAACCGACUUACGUUGAAAAGUG AGCGGAUGAACUGAGGGUAGCGGAGAAAUUCCAAUCGAACCUGGAGAUAGCUGGUUCUCUCCGAAAUAGCUUUAGGGCUA GCCUCAAGUGAUGAUUAUUGGAGGUAGAGCACUGUUUGGACGAGGGGCCCCUCUCGGGUUACCGAAUUCAGACAAACUCC GAAUGCCAAUUAAUUUAACUUGGGAGUCAGAACAUGGGUGAUAAGGUCCGUGUUCGAAAGGGAAACAGCCCAGACCACCA GCUAAGGUCCCAAAAUAUAUGUUAAGUGGAAAAGGAUGUGGCGUUGCCCAGACAACUAGGAUGUUGGCUUAGAAGCAGCC AUCAUUUAAAGAGUGCGUAAUAGCUCACUAGUCGAGUGACACUGCGCCGAAAAUGUACCGGGGCUAAACAUAUUACCGAA GCUGUGGAUUGUCCUUUGGACAAUGGUAGGAGAGCGUUCUAAGGGCGUUGAAGCAUGAUCGUAAGGACAUGUGGAGCGCU UAGAAGUGAGAAUGCCGGUGUGAGUCGCGAAAGACGGGUGAGAAUCCCGUCCACCGAUUGACUAAGGUUUCCAGAGGAAG GCUCGUCCGCUCUGGGUUAGUCGGGUCCUAAGCUGAGGCCGACAGGCGUAGGCGAUGGAUAACAGGUUGAUAUUCCUGUA CCACCUAUAAUCGUUUUAAUCGAUGGGGGGACGCAGUAGGAUAGGCGAAGCGUGCGAUUGGAUUGCACGUCUAAGCAGUA AGGCUGAGUAUUAGGCAAAUCCGGUACUCGUUAAGGCUGAGCUGUGAUGGGGAGAAGACAUUGAGUCUUCGAGUCGUUGA UUUCACACUGCCGAGAAAAGCCUCUAGAUAGAAAAUAGGUGCCCGUACCGCAAACCGACACAGGUAGUCAAGAUGAGAAU UCUAAGGUGAGCGAGCGAACUCUCGUUAAGGAACUCGGCAAAAUGACCCCGUAACUUCGGGAGAAGGGGUGCUCUUUAGG GUUAACGCCCAGAAGAGCCGCAGUGAAUAGGCCCAAGCGACUGUUUAUCAAAAACACAGGUCUCUGCUAAACCGUAAGGU GAUGUAUAGGGGCUGACGCCUGCCCGGUGCUGGAAGGUUAAGAGGAGUGGUUAGCUUCUGCGAAGCUACGAAUCGAAGCC CCAGUAAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCCGCACGAAAGG CGUAACGAUUUGGGCACUGUCUCAACGAGAGACUCGGUGAAAUCAUAGUACCUGUGAAGAUGCAGGUUACCCGCGACAGG ACGGAAAGACCCCGUGGAGCUUUACUGUAGCCUGAUAUUGAAAUUCGGCACAGCUUGUACAGGAUAGGUAGGAGCCUUUG AAACGUGAGCGCUAGCUUACGUGGAGGCGCUGGUGGGAUACUACCCUAGCUGUGUUGGCUUUCUAACCCGCACCACUUAU CGUGGUGGGAGACAGUGUCAGGCGGGCAGUUUGACUGGGGCGGUCGCCUCCUAAAAGGUAACGGAGGCGCUCAAAGGUUC CCUCAGAAUGGUUGGAAAUCAUUCAUAGAGUGUAAAGGCAUAAGGGAGCUUGACUGCGAGACCUACAAGUCGAGCAGGGU CGAAAGACGGACUUAGUGAUCCGGUGGUUCCGCAUGGAAGGGCCAUCGCUCAACGGAUAAAAGCUACCCCGGGGAUAACA GGCUUAUCUCCCCCAAGAGUUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGCAUCCUGGGGCUGUAGU CGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGCGAGCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCU AUCCGUCGUGGGCGUAGGAAAUUUGAGAGGAGCUGUCCUUAGUACGAGAGGACCGGGAUGGACAUACCUCUGGUGUACCA GUUGUCGUGCCAACGGCAUAGCUGGGUAGCUAUGUGUGGACGGGAUAAGUGCUGAAAGCAUCUAAGCAUGAAGCCCCCCU CAAGAUGAGAUUUCCCAACUUCGGUUAUAAGAUCCCUCAAAGAUGAUGAGGUUAAUAGGUUCGAGGUGGAAGCAUGGUGA CAUGUGGAGCUGACGAAUACUAAUCGAUCGAAGACUUAAUCAA CP000253.1 16S rRNA Staphylococcus aureus subsp. aureus NCTC 8325 0.501711156 1 GGAGAGUUUGAUCCUGGCUCAGGAUGAACGCUGGCGGCGUGCCUAAUACAUGCAAGUCGAGCGAACGGACGAGAAGCUUG CUUCUCUGAUGUUAGCGGCGGACGGGUGAGUAACACGUGGAUAACCUACCUAUAAGACUGGGAUAACUUCGGGAAACCGU AGCUAAUACCGGAUAAUAUUUUGAACCGCAUGGUUCAAAAGUGAAAGACGGUCUUGCUGUCACUUAUAGAUGGAUCCGCG CUGCAUUAGCUAGUUGGUAAGGUAACGGCUUACCAAGGCAACGAUGCAUAGCCGACCUGAGAGGGUGAUCGGCCACACUG GAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUAGGGAAUCUUCCGCAAUGGGCGAAAGCCUGACGGAGCAAC GCCGCGUGAGUGAUGAAGGUCUUCGGAUCGUAAAACUCUGUUAUUAGGGAAGAACAUAUGUGUAAGUAACUGUGCACAUC UUGACGGUACCUAAUCAGAAAGCCACGGCUAACUACGUGCCAGCAGCCGCGGUAAUACGUAGGUGGCAAGCGUUAUCCGG AAUUAUUGGGCGUAAAGCGCGCGUAGGCGGUUUUUUAAGUCUGAUGUGAAAGCCCACGGCUCAACCGUGGAGGGUCAUUG GAAACUGGAAAACUUGAGUGCAGAAGAGGAAAGUGGAAUUCCAUGUGUAGCGGUGAAAUGCGCAGAGAUAUGGAGGAACA CCAGUGGCGAAGGCGACUUUCUGGUCUGUAACUGACGCUGAUGUGCGAAAGCGUGGGGAUCAAACAGGAUUAGAUACCCU GGUAGUCCACGCCGUAAACGAUGAGUGCUAAGUGUUAGGGGGUUUCCCGCCCCUUAGUGCUGCAGCUAACGCAUUAAGCA CUCCGCCUGGGGAGUACGACCGCAAGGUUGAAACUCAAAGGAAUUGACGGGGACCCGCACAAGCGGUGGAGCAUGUGGUU UAAUUCGAAGCAACGCGAAGAACCUUACCAAAUCUUGACAUCCUUUGACAACUCUAGAGAUAGAGCCUUCCCCUUCGGGG GACAAAGUGACAGGUGGUGCAUGGUUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCC UUAAGCUUAGUUGCCAUCAUUAAGUUGGGCACUCUAAGUUGACUGCCGGUGACAAACCGGAGGAAGGUGGGGAUGACGUC AAAUCAUCAUGCCCCUUAUGAUUUGGGCUACACACGUGCUACAAUGGACAAUACAAAGGGCAGCGAAACCGCGAGGUCAA GCAAAUCCCAUAAAGUUGUUCUCAGUUCGGAUUGUAGUCUGCAACUCGACUACAUGAAGCUGGAAUCGCUAGUAAUCGUA GAUCAGCAUGCUACGGUGAAUACGUUCCCGGGUCUUGUACACACCGCCCGUCACACCACGAGAGUUUGUAACACCCGAAG CCGGUGGAGUAACCUUUUAGGAGCUAGCCGUCGAAGGUGGGACAAAUGAUUGGGGUGAAGUCGUAACAAGGUAGCCGUAU CGGAAGGUGCGGCUGGAUCACCUCCUUUCUA CP000253.1 5S rRNA Staphylococcus aureus subsp. aureus NCTC 8325 0.036974944999999995 1 UCUGGUGACUAUAGCAAGGAGGUCACACCUGUUCCCAUGCCGAACACAGAAGUUAAGCUCCUUAGCGUCGAUGGUAGUCG AACUUACGUUCCGCUAGAGUAGAACGUUGCCAGGC CP000253.1 50S ribosomal protein L2 Staphylococcus aureus subsp. aureus NCTC 8325 0.030217163999999998 1 LEVO MAIKKYKPITNGRRNMTSLDFAEITKTTPEKSLLKPLPKKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGINAKVDS IQYDPNRSANIALVVYADGEKRYIIAPKGLEVGQIVESGAEADIKVGNALPLQNIPVGTVVHNIELKPGKGGQIARSAGA SAQVLGKEGKYVLIRLRSGEVRMILSTCRATIGQVGNLQHELVNVGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGRAP IGRPSPMSPWGKPTLGKKTRRGKKSSDKLIVRGRKKK P60430 50S ribosomal protein L3 Staphylococcus aureus subsp. aureus NCTC 8325 0.023760256 1 LEVO MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYKKDAKSNKYANKPAEGHAKKA DAAPKRFIREFRNVDVDAYEVGQEVSVDTFVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGMASDA SRVFKGQKMPGRMGGNTVTVQNLEVVQVDTENKVILVKGNVPGPKKGLVEIRTSIKKGNK Q2FW06 50S ribosomal protein L4 Staphylococcus aureus subsp. aureus NCTC 8325 0.022495697 1 LEVO MANYDVLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRARQGTIRA PQWRGGGIVFGPTPRSYAYKMPKKMRRLALRSALSFKAQENGLTVVDAFNFEAPKTKEFKNVLSTLEQPKKVLVVTENED VNVELSARNIPGVQVTTAQGLNVLDITNADSLVITEAAAKKVEEVLG Q2FW07 50S ribosomal protein L5 Staphylococcus aureus subsp. aureus NCTC 8325 0.020296637 1 LEVO MNRLKEKFNTEVTENLMKKFNYSSVMEVPKIDKIVVNMGVGDAVQNSKVLDNAVEELELITGQKPLVTKAKKSIATFRLR EGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFQGVSKKAFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTA NTDEEARELLANFGMPFRK Q2FW18 50S ribosomal protein L6 Staphylococcus aureus subsp. aureus NCTC 8325 0.019818580000000002 1 LEVO MSRVGKKIIDIPSDVTVTFDGNHVTVKGPKGELSRTLNERMTFKQEENTIEVVRPSDSKEDRTNHGTTRALLNNMVQGVS QGYVKVLELVGVGYRAQMQGKDLILNVGYSHPVEIKAEENITFSVEKNTVVKVEGISKEQVGALASNIRSVRPPEPYKGK GIRYQGEYVRRKEGKTGK Q2FW21 50S ribosomal protein L13 Staphylococcus aureus subsp. aureus NCTC 8325 0.016359427 1 LEVO MRQTFMANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSN HPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHPHAAQQPENYELRG Q2FW38 50S ribosomal protein L14 Staphylococcus aureus subsp. aureus NCTC 8325 0.013157342 1 LEVO MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVKNATPGGVVKKGDVVKAVIVRTKSGVRRNDGSYIKFD ENACVIIRDDKGPRGTRIFGPVARELREGNFMKIVSLAPEVL Q2FW16 50S ribosomal protein L15 Staphylococcus aureus subsp. aureus NCTC 8325 0.01562889 1 LEVO MKLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPKRGFTNINRKEYAIVNLD QLNKFEDGTEVTPALLVESGVVKNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKGGAHEVI P0A0F8 50S ribosomal protein L17 Staphylococcus aureus subsp. aureus NCTC 8325 0.013771773 1 LEVO MGYRKLGRTSDQRKAMLRDLATSLIISERIETTEARAKEVRSVVEKLITLGKKGDLASRRNAAKTLRNVEILNEDETTQT ALQKLFGEIAERYTERQGGYTRILKQGPRRGDGAESVIIELV Q2FW33 50S ribosomal protein L18 Staphylococcus aureus subsp. aureus NCTC 8325 0.013124093 1 LEVO MISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQIIDDNKGVTLAQASSKDSDIATTATKVELATKVGEAI AKKAADKGIKEIVFDRGGYLYHGRVKALAEAARESGLEF Q2FW22 50S ribosomal protein L19 Staphylococcus aureus subsp. aureus NCTC 8325 0.013392771 1 LEVO MTNHKLIEAVTKSQLRTDLPSFRPGDTLRVHVRIIEGTRERIQVFEGVVIKRRGGGVSETFTVRKISSGVGVERTFPLHT PKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR Q2FZ42 50S ribosomal protein L20 Staphylococcus aureus subsp. aureus NCTC 8325 0.013720294999999999 1 LEVO MPRVKGGTVTRARRKKTIKLAKGYFGSKHTLYKVAKQQVMKSGQYAFRDRRQRKRDFRKLWITRINAAARQHEMSYSRLM NGLKKAGIDINRKMLSEIAISDEKAFAQLVTKAKDALK Q2FXQ1 50S ribosomal protein L21 Staphylococcus aureus subsp. aureus NCTC 8325 0.011354081 1 LEVO MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDTFTFDKVLFVGGDSVKVGAPTVEGATVTATVNKQGRGKKITVFTYKRRK NSKRKKGHRQPYTKLTIDKINA Q2FXS8 50S ribosomal protein L22 Staphylococcus aureus subsp. aureus NCTC 8325 0.012857921999999999 1 LEVO MEAKAVARTIRIAPRKVRLVLDLIRGKNAAEAIAILKLTNKASSPVIEKVLMSALANAEHNYDMNTDELVVKEAYANEGP TLKRFRPRAQGRASAINKRTSHITIVVSDGKEEAKEA Q2FW11 50S ribosomal protein L23 Staphylococcus aureus subsp. aureus NCTC 8325 0.010625398 1 LEVO MEARDILKRPVITEKSSEAMAEDKYTFDVDTRVNKTQVKMAVEEIFNVKVASVNIMNYKPKKKRMGRYQGYTNKRRKAIV TLKEGSIDLFN Q2FW08 50S ribosomal protein L24 Staphylococcus aureus subsp. aureus NCTC 8325 0.011561504 1 LEVO MHIKKGDNVKVIAGKDKGKEGKVIATLPKKDRVVVEGVNIMKKHQKPTQLNPEGGILETEAAIHVSNVQLLDPKTNEPTR VGYKFVDGKKVRIAKKSGEEIKSNN Q2FW17 50S ribosomal protein L25 Staphylococcus aureus subsp. aureus NCTC 8325 0.023810609 1 LEVO MASLKSIIRQGKQTRSDLKQLRKSGKVPAVVYGYGTKNVSVKVDEVEFIKVIREVGRNGVIELGVGSKTIKVMVADYQFD PLKNQITHIDFLAINMSEERTVEVPVQLVGEAVGAKEGGVVEQPLFNLEVTATPDNIPEAIEVDITELNINDSLTVADVK VTGDFKIENDSAESVVTVVAPTEEPTEEEIEAMEGEQQTEEPEVVGESKEDEEKTEE Q2G0S0 50S ribosomal protein L28 Staphylococcus aureus subsp. aureus NCTC 8325 0.006995288999999999 1 LEVO MGKQCFVTGRKASTGNRRSHALNSTKRRWNANLQKVRILVDGKPKKVWVSARALKSGKVTRV Q2FZ60 50S ribosomal protein L29 Staphylococcus aureus subsp. aureus NCTC 8325 0.008105266 1 LEVO MKAKEIRDLTTSEIEEQIKSSKEELFNLRFQLATGQLEETARIRTVRKTIARLKTVAREREIEQSKANQ Q2FW14 50S ribosomal protein L30 Staphylococcus aureus subsp. aureus NCTC 8325 0.006565683 1 LEVO MAKLQITLTRSVIGRPETQRKTVEALGLKKTNSSVVVEDNPAIRGQINKVKHLVTVEEK P0A0G2 50S ribosomal protein L33 2 Staphylococcus aureus subsp. aureus NCTC 8325 0.005885783 1 LEVO MRVNVTLACTECGDRNYITTKNKRNNPERVEMKKFCSRENKQTLHRETK Q2FY22 50S ribosomal protein L35 Staphylococcus aureus subsp. aureus NCTC 8325 0.007722368 1 LEVO MPKMKTHRGAAKRVKRTASGQLKRSRAFTSHLFANKSTKQKRQLRKARLVSKSDMKRVKQLLAYKK Q2FXQ0 50S ribosomal protein L34 Staphylococcus aureus subsp. aureus NCTC 8325 0.005454642 1 LEVO MVKRTYQPNKRKHSKVHGFRKRMSTKNGRKVLARRRRKGRKVLSA Q2FUQ0 30S ribosomal protein S3 Staphylococcus aureus subsp. aureus NCTC 8325 0.024143866999999996 1 LEVO MGQKINPIGLRVGIIRDWEAKWYAEKDFASLLHEDLKIRKFIDNELKEASVSHVEIERAANRINIAIHTGKPGMVIGKGG SEIEKLRNKLNALTDKKVHINVIEIKKVDLDARLVAENIARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGAD IARAEQYSEGTVPLHTLRADIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTSGGGK Q2FW12 30S ribosomal protein S4 Staphylococcus aureus subsp. aureus NCTC 8325 0.023051416 1 LEVO MARFRGSNWKKSRRLGISLSGTGKELEKRPYAPGQHGPNQRKKLSEYGLQLREKQKLRYLYGMTERQFRNTFDIAGKKFG VHGENFMILLASRLDAVVYSLGLARTRRQARQLVNHGHILVDGKRVDIPSYSVKPGQTISVREKSQKLNIIVESVEINNF VPEYLNFDADSLTGTFVRLPERSELPAEINEQLIVEYYSR Q2FXK6 30S ribosomal protein S7 Staphylococcus aureus subsp. aureus NCTC 8325 0.017826555 1 LEVO MPRKGSVPKRDVLPDPIHNSKLVTKLINKIMLDGKRGTAQRILYSAFDLVEQRSGRDALEVFEEAINNIMPVLEVKARRV GGSNYQVPVEVRPERRTTLGLRWLVNYARLRGEKTMEDRLANEILDAANNTGGAVKKREDTHKMAEANKAFAHYRW P48940 30S ribosomal protein S10 Staphylococcus aureus subsp. aureus NCTC 8325 0.011598503 1 LEVO MAKQKIRIRLKAYDHRVIDQSAEKIVETAKRSGADVSGPIPLPTEKSVYTIIRAVHKYKDSREQFEQRTHKRLIDIVNPT PKTVDALMGLNLPSGVDIEIKL A0A0D1JTN2 30S ribosomal protein S11 Staphylococcus aureus subsp. aureus NCTC 8325 0.013907977999999998 1 LEVO MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTPFAAQMASETASKSAMEHGLK TVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNGCRPPKRRRV Q2FW31 30S ribosomal protein S14 type Z Staphylococcus aureus subsp. aureus NCTC 8325 0.0072466909999999995 1 LEVO MAKTSMVAKQQKKQKYAVREYTRCERCGRPHSVYRKFKLCRICFRELAYKGQIPGVRKSW Q2FW19 30S ribosomal protein S15 Staphylococcus aureus subsp. aureus NCTC 8325 0.010634329999999999 1 LEVO MAISQERKNEIIKEYRVHETDTGSPEVQIAVLTAEINAVNEHLRTHKKDHHSRRGLLKMVGRRRHLLNYLRSKDIQRYRE LIKSLGIRR Q2G2Q1 30S ribosomal protein S16 Staphylococcus aureus subsp. aureus NCTC 8325 0.010253886 1 LEVO MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPTSANAPEIKVDEALALKWLNDGAKPTDTVHNILSKEGI MKKFDEQKKAK Q2FZ45 30S ribosomal protein S20 Staphylococcus aureus subsp. aureus NCTC 8325 0.009039472 1 LEVO MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNAKTAVSNNADNKNELVSLAVKLVDKAAQSNLIHSNKADRIKSQLMT ANK Q2FXY6 50S ribosomal protein L36 Staphylococcus aureus subsp. aureus NCTC 8325 0.004318422 1 LEVO MKVRPSVKPICEKCKVIKRKGKVMVICENPKHKQRQG Q2FW29 30S ribosomal protein S19 Staphylococcus aureus subsp. aureus NCTC 8325 0.010639309 1 LEVO MARSIKKGPFVDEHLMKKVEAQEGSEKKQVIKTWSRRSTIFPNFIGHTFAVYDGRKHVPVYVTEDMVGHKLGEFAPTRTF KGHVADDKKTRR Q2FW10 30S ribosomal protein S13 Staphylococcus aureus subsp. aureus NCTC 8325 0.013747918999999999 1 LEVO MARIAGVDIPREKRVVISLTYIYGIGTSTAQKILEEANVSADTRVKDLTDDELGRIREVVDGYKVEGDLRRETNLNIKRL MEISSYRGIRHRRGLPVRGQKTKNNARTRKGPVKTVANKKK Q2FW30 30S ribosomal protein S9 Staphylococcus aureus subsp. aureus NCTC 8325 0.014856986999999999 1 LEVO MTLAQVEYRGTGRRKNSVARVRLVPGEGNITVNNRDVREYLPFESLILDLNQPFDVTETKGNYDVLVNVHGGGFTGQAQA IRHGIARALLEADPEYRGSLKRAGLLTRDPRMKERKKPGLKAARRSPQFSKR Q2FW39 30S ribosomal protein S5 Staphylococcus aureus subsp. aureus NCTC 8325 0.017770512 1 LEVO MARREEETKEFEERVVTINRVAKVVKGGRRFRFTALVVVGDKNGRVGFGTGKAQEVPEAIKKAVEAAKKDLVVVPRVEGT TPHTITGRYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATIDGLQNLKNAEDVAKLRGKT VEELYN Q2FW23 30S ribosomal protein S8 Staphylococcus aureus subsp. aureus NCTC 8325 0.014854315 1 LEVO MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKEIAEILKSEGFIKNVEYVEDDKQGVLRLFLKYGQNDERVITGLKRI SKPGLRVYAKASEMPKVLNGLGIALVSTSEGVITDKEARKRNVGGEIIAYVW Q2FW20 30S ribosomal protein S18 Staphylococcus aureus subsp. aureus NCTC 8325 0.009332018 1 LEVO MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRSRHMALLPYVKEEQ Q2G111 30S ribosomal protein S6 Staphylococcus aureus subsp. aureus NCTC 8325 0.011613146 1 LEVO MRTYEVMYIVRPNIEEDAKKALVERFNGILATEGAEVLEAKDWGKRRLAYEINDFKDGFYNIVRVKSDNNKATDEFQRLA KISDDIIRYMVIREDEDK Q2G113 RNA (5'-R(P*GP*GP*AP*GP*GP*UP*AP*UP*G)-3') Staphylococcus aureus subsp. aureus NCTC 8325 0.004128384 1 GGAGGU(N)(N)(N)(N)(N)(N)AUG 30S ribosomal protein S12 Staphylococcus aureus subsp. aureus NCTC 8325 0.01532087 1 LEVO MPTINQLVRKPRQSKIKKSDSPALNKGFNSKKKKFTDLNSPQKRGVCTRVGTMTPKKPNSALRKYARVRLSNNIEINAYI PGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDTSGVDGRRQGRSLYGTKKPKN P0A0H0 30S ribosomal protein S17 Staphylococcus aureus subsp. aureus NCTC 8325 0.010196888000000001 1 LEVO MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDIVKIQETRPLSATKRFRLVEI VEESVII Q2FW15 30S ribosomal protein S2 Staphylococcus aureus subsp. aureus NCTC 8325 0.029136369 1 LEVO MAVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAYNFLKQVSEDGGQVLFVGTKKQAQESV KSEAERAGQFYINQRWLGGLLTNYKTISKRIKRISEIEKMEEDGLFEVLPKKEVVELKKEYDRLIKFLGGIRDMKSMPQA LFVVDPRKERNAIAEARKLNIPIVGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAILEGQQGVSNEEVAAEQNID LDEKEKSEETEATEE Q2FZ25 50S ribosomal protein L31 type B Staphylococcus aureus subsp. aureus NCTC 8325 0.009737912 1 LEVO MKQGIHPEYHQVIFLDTTTNFKFLSGSTKTSSEMMEWEDGKEYPVIRLDISSDSHPFYTGRQKFAAADGRVERFNKKFGL KSNN Q2FWD8 50S ribosomal protein L32 Staphylococcus aureus subsp. aureus NCTC 8325 0.006500609 1 LEVO MAVPKRRTSKTRKNKRRTHFKISVPGMTECPNCGEYKLSHRVCKNCGSYNGEEVAAK A0A0D1H2J5 MAGNESIUM ION 2.4305e-05 138 MG ADENOSINE-5'-TRIPHOSPHATE 0.000507181 2 ATP POTASSIUM ION 3.9098e-05 18 K ZINC ION 6.5409e-05 4 ZN singleParticle particle 7.5 Quantifoil R1.2/1.3 COPPER 200 GLOW DISCHARGE ETHANE 100 277.15 FEI VITROBOT MARK III FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 -0.7000000000000001 -1.9000000000000001 165000.0 GATAN K2 SUMMIT (4k x 4k) 1 26.3 1 165872 Generated by RELION using 70S particles from 2D classification. 1 3.1 FSC 0.143 CUT-OFF 61910 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_12332_additional_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 288.63998 288.63998 288.63998 90.0 90.0 90.0 X Y Z -0.041097533 0.08303618 0.00014765543 0.00220162 0.81999993 0.81999993 0.81999993 AUTHOR ::::EMDATABANK.org::::EMD-12332:::: Multibody refinement of ribosomal small subunit body. Post-processed with automatically estimated B-factor. emd_12332_additional_3.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 288.63998 288.63998 288.63998 90.0 90.0 90.0 X Y Z -0.055578467 0.10978257 0.00035507724 0.003832837 0.81999993 0.81999993 0.81999993 AUTHOR ::::EMDATABANK.org::::EMD-12332:::: Multibody refinement of ribosomal large subunit. Post-processed with automatically estimated B-factor. emd_12332_additional_4.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 288.63998 288.63998 288.63998 90.0 90.0 90.0 X Y Z -0.049987964 0.08735998 0.00010869635 0.0019626329 0.81999993 0.81999993 0.81999993 AUTHOR ::::EMDATABANK.org::::EMD-12332:::: Multibody refinement of ribosomal small subunit head with VgaA-LC NBDs, L1 stalk, and P-tRNA. Post-processed with automatically estimated B-factor. emd_12332_additional_5.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 288.63998 288.63998 288.63998 90.0 90.0 90.0 X Y Z -0.011130288 0.030870862 0.00017161673 0.0019834677 0.81999993 0.81999993 0.81999993 AUTHOR ::::EMDATABANK.org::::EMD-12332:::: VgaA-LC in complex with 70S ribosome from Staphylococcus aureus. Output from RELION Refine3D job. emd_12332_additional_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 352 352 352 0 0 0 352 352 352 288.63998 288.63998 288.63998 90.0 90.0 90.0 X Y Z -0.03802004 0.07393227 0.00035784522 0.0030383044 0.81999993 0.81999993 0.81999993 AUTHOR ::::EMDATABANK.org::::EMD-12332:::: VgaA-LC in complex with 70S ribosome from Staphylococcus aureus. Post-processed with automatically estimated B-factor. emd_12332_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 510 510 510 0 0 0 510 510 510 418.19998 418.19998 418.19998 90.0 90.0 90.0 X Y Z -0.06722623 0.08369176 -0.00021635961 0.0084155165 0.82 0.82 0.82 AUTHOR ::::EMDATABANK.org::::EMD-12332:::: VgaA-LC in complex with 70S ribosome from Staphylococcus aureus. Half map 2. emd_12332_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 510 510 510 0 0 0 510 510 510 418.19998 418.19998 418.19998 90.0 90.0 90.0 X Y Z -0.07283325 0.086631306 -0.00021785859 0.008365026 0.82 0.82 0.82 AUTHOR ::::EMDATABANK.org::::EMD-12332:::: VgaA-LC in complex with 70S ribosome from Staphylococcus aureus. Half map 1.