REL
PDBe
PDBe
PDBe
2006-02-28
2006-03-01
2006-07-01
2011-05-26
Automated cryoEM data acquisition and analysis of 284742 particles of GroEL.
Stagg SM
Pulokas J
Fellmann D
Cheng A
Quispe JD
Mallick SP
Avila RM
Carragher B
Potter CS
Stagg SM
Lander GC
Pulokas J
Fellmann D
Cheng A
Quispe JD
Mallick SP
Avila RM
Carragher B
Potter CS
Automated cryoEM data acquisition and analysis of 284742 particles of GroEL.
J.STRUCT.BIOL.
155
470
481
2006
16762565
doi:10.1016/j.jsb.2006.04.005
E.coli GroEL
E.coli GroEL
homotetradecamer
1
0.800
0.800
Calculated molecular weight from sequence
GroEL
Escherichia coli
E.coli
cytosol
0.800
0.800
14
homotetradecamer
true
Escherichia coli
singleParticle
particle
3.2
7.5
100mM Hepes, 10mM Mg(OAc)2, 10mM KOAc, 2mM DTT
Protochips C-flat grid: holey carbon with
2um holes and 2um spacing 400 mesh copper grid
ETHANE
100
93
OTHER
Vitrification instrument: FEI Vitrobot. Grid plasma cleaned for 20s with Fischione 1020 plasma cleaner using 75% Argon 25% Oxygen mix.
Temperature of chamber was 4 degrees C. 0 seconds
drain time. Single blot. 0 mm offset. 4 ul sample
applied to grid. Blot for 3.5 seconds before plunging.
FEI TECNAI F20
FLOOD BEAM
BRIGHT FIELD
FIELD EMISSION GUN
120
2
0.5
2.28
50000.0
GATAN LIQUID NITROGEN
94
objective lens astigmatism was corrected at
50,000X magnification
2005-05-19
GATAN ULTRASCAN 4000 (4k x 4k)
552
11.5
16.
Gatan 626 side entry cryo-stage
0
0
The images were acquired using the Leginon
automated data aquisition system. The particles
were automatically selected using the Selexon
package. The CTF was automatically estimated using the
ACE package
Phase correction for each particle. Amplitude
correction for the final volume
D7
OTHER
7.8
FSC 0.5 CUT-OFF
EMAN
158390
333