2025-07-09 REL PDBe INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY INITIAL_RELEASE REPOSITORY EXPERIMENTAL_SUMMARY em_admin em_software _em_admin.last_update _em_software.name DATA_COLLECTION em_admin em_software _em_admin.last_update _em_software.name PDBe PDBe 2020-10-22 2021-12-08 2021-12-08 2025-07-09 Max Planck Society Germany Cryo-EM structure of Arabidopsis thaliana Complex-I (membrane core) Klusch N Kuehlbrandt W Complex-I, ELECTRON TRANSPORT Klusch N Senkler J Yildiz O Kuhlbrandt W Braun HP A ferredoxin bridge connects the two arms of plant mitochondrial complex I. Plant Cell US 33 2072 2091 2021 33768254 doi:10.1093/plcell/koab092 1532-298X 2109 PLCEEW 7aqq FULLOVERLAP Arabidopsis complex I - membrane core Arabidopsis complex I - membrane core 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 Arabidopsis thaliana NADH-ubiquinone oxidoreductase chain 3 Arabidopsis thaliana 0.013941387 1 LEVO MMLEFAPIFIYLVISLLVSLILLGVPFLFASNSSTYPEKLSAYECGFDPFGDARSRFDIRFYLVSILFLIFDLEVTFFFP WAVSLNKIDLFGFWSMMAFLFILTIGFLYEWKRGALDWE P92533 7.1.1.2 NADH-ubiquinone oxidoreductase chain 1 Arabidopsis thaliana 0.03602007 1 LEVO MYIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAPVA TFMLSLVAWAVVPFDYGMVLSDLNIGLLYLFAISSLGVYGIIIAGRSSNSKYAFLGALRSAAQMVSYEVSIGLILITVLI CVGSCNLSEIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAELVAGYNVEYSSMGFALFFLGEYANMILMS GLCTLFFLGGWLPILDLPIFKKIPGSIWFSIKVLFFLFLYIWVRAAFPRYRYDQLMGLGWKVFLPLSLAWVVSVSGLLVT FQWLP B5TM92 7.1.1.2 NADH-ubiquinone oxidoreductase chain 6 Arabidopsis thaliana 0.023690384999999998 1 LEVO MILSVLSSLALVSGLMVVRAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVLFLFVVMMFHIQIAEIH EEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILL VAMIGAIVLTMHRTTKVKRQDVFRRNAIDFRRTIMRRTTDPLTIY A0A2P2CLG1 7.1.1.2 NADH dehydrogenase subunit 4L Arabidopsis thaliana 0.011165549 1 LEVO MDLIKYFTFSMIIFILGIWGILLNRRNILIMLMSIELMLLAVNLNFLVFSVSLDDMMGQVFALLVLTVAAAESAIGLAIF VITFRVRGTIAVEFINSIQG A0A2P2CLH7 NADH-ubiquinone oxidoreductase chain 5 Arabidopsis thaliana 0.07449797699999999 1 LEVO MYLLIVFLPLLGSSVAGFFGRFLGSEGSAIMTTTCVSFSSILSLIAFYEVALGASACYLRIAPWISSEMFDASWGFLFDS LTVVMLIVVTFISSLVHLYSISYMSEDPHSPRFMCYLSIFTFFMLMLVTGDNFLQLFLGWEGVGLASYLLIHFWFTRLQA DKAAIKAMLVNRVGDFGLALGILGCFTLFQTVDFSTIFACASVPRNSWIFCNMRLNAISLICILLFIGAVGKSAQIGLHT WLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPTALIVITFAGAMTSFLAATTGILQNDLKRVIAYSTCSQLG YMIFACGISNYSVSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSFPLTYAMMLIGSLSLIGFPFLTGFYS KDVILELAYTKYTISGNFAFWLGSVSVLFTSYYSFRLLFLTFLVPTNSFGRDISRCHDAPIPMAIPLILLALGSLFVGYL AKDMMIGLGTNFWANSLLVLPKNEILAESEFAAPTIIKLIPILFSTLGAFVAYNVNLVADQFQRAFQTSTFCNRLYSFFN KRWFFDQVLNDFLVRSFLRFGYEVSFEALDKGAIEILGPYGISYTFRRLAERISQLQSGFVYHYAFAMLLGLTLFVTFFC MWDSLSSWVDNRLSFILIVSSFYTKSSQE B5TM94 7.1.1.2 NADH-ubiquinone oxidoreductase chain 4 Arabidopsis thaliana 0.056055758 1 LEVO MLEHFCECYFNLSGLILCPVLGSIILLFIPNSRIRLIRLIGLCASLITFLYSLVLWIQFDSSTAKFQFVESLRWLPYENI NFYLGIDGISLFFVILTTFLIPICILVGWSGMRSYGKEYIIAFLICEFLMIAVFCMLDLLLFYVFFESVLIPMFIIIGVW GSRQRKIKAAYQFFLYTLLGSLFMLLAILLILFQTGTTDLQILLTTEFSERRQIFLWIAFFASFAVKVPMVPVHIWLPEA HVEAPTAGSVILAGILLKFGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLTTLRQIDLKKIIAYSSVAHMNLVT IGMFSLNIQGIGGSILLMLSHGLVSSALFLCVGVLYDRHKTRLVRYYGGLVSTMPNFFTIFFFFTLANMSLPGTSSFIGE FLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVSGNLKPDFLHKFSDLNGREVFIFIPFLVGLVWMGVYPKVFLDC MHTSVSNLVQHGKFH B5TM93 7.1.1.2 NADH-ubiquinone oxidoreductase chain 2 Arabidopsis thaliana 0.055486836 1 LEVO MKAEFVRILPHMFNLFLAVFPEIFIINATFILLIHGVVFSTSKKYDYPPLASNVGWLGLLSVLITLLLLAAGAPLLTIAH LFWNNLFRRDNFTYFCQIFLLLSTAGTISMCFDFFDQERFDAFEFIVLILLSTCGMLFMISAYDLIAMYLAIELQSLCFY VIAASKRKSEFSTEAGLKYLILGAFSSGILLFGCSMIYGSTGATHFDQLAKILTGYEITGARSSGIFMGILFIAVGFLFK ITAVPFHMWAPDIYEGSPTPVTAFLSIAPKISIFANILRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLA YSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYALMTMDAFAIVLALRQTRVKYIADLGALAKTNPILAITFSITMFSYAG IPPLAGFCSKFYLFFAALGCGAYFLALVGVVTSVIGCFYYIRLVKRMFFDTPRTWILYEPMDRNKSLLLAMTSFFITLFL LYPSPLFSVTHQMALSLYL O05000 7.1.1.2 AT3G07480.1 Arabidopsis thaliana 0.017626197 1 LEVO MATTLQKLSSQIHRLSPFTRSLIVRTSATSAPSPSLGSKKVSDRIVKLSAIDPDGYKQDIIGLSGQTLLRALTHTGLIDP ASHRLDDIEACSAECEVQIAEEWLEKLPPRTYDEEYVLKRSSRSRILNKHSRLGCQVVLTQELQGMVVAVPEAKPWDIP A0A384LA38 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B Arabidopsis thaliana 0.011985953999999998 1 LEVO MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCVLGLLKDLHQKCQKEMDDYVG CMYYYTNEFDLCRKEQEAFEKVCPLK Q8LGE7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A Arabidopsis thaliana 0.016145584 1 LEVO MTEAMIRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRISNTGPSAMAMFLAVSGAFAWGMYQVGQGNKIRRALKEEKYA ARRTILPILQAEEDERFVSEWKKYLEYEADVMKDVPGWKVGENVYNSGRWMPPATGELRPDVW Q8RWA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 Arabidopsis thaliana 0.0073496279999999995 1 LEVO MSLVWLEAMLPLGIIGGMLCIMGNSQYYIHKAYHGRPKHIGHDEWDVAMERRDKKVVEKAAAPSS Q9C9Z5 At2g46540/F11C10.23 Arabidopsis thaliana 0.006810177 1 LEVO MPVMEKLRMFVAQEPVVAASCLIGGVGLFLPAVVRPILDSLEASKQVKAPPLTDVIAGVTGKKQS Q9ZPY5 Excitatory amino acid transporter Arabidopsis thaliana 0.009220748999999999 1 LEVO MPISATMVGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFANQLVKWDVKLKEDLDVMLAKARAANERRYFDEDR D Q94AL6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B Arabidopsis thaliana 0.009914132999999999 1 LEVO MASGWGITGNKGRCYDFWMDFSECMSHCREPKDCTLLREDYLECLHHSKEFQRRNRIYKEEQRKLRAASRKGEETGDGTH THH Q9LZI6 At4g16450 Arabidopsis thaliana 0.011355008 1 LEVO MNTDITALEKAQYPVVDRNPAFTKVVGNFSTLDYLRFSTITGISVTVGYLSGIKPGIKGPSMVTGGLIGLMGGFMYAYQN SAGRLMGFFPNDGEVASYQKRGGFSK Q84W12 P1 Arabidopsis thaliana 0.011808244 1 LEVO MGFIMEFAENLVLRLMENPEERDRKAREHIYEMHERCKKIKEMWALPIRPYGFWTFERHNAQLRWDPQISQVAGRRDPYD DLLEDNYTPPSSSSSSSD A0A178W1I8 unknown Arabidopsis thaliana 0.0025711609999999998 1 LEVO (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) Uncharacterized protein At2g27730, mitochondrial Arabidopsis thaliana 0.01196552 1 LEVO MATRNALRIVSRRFSSGKVLSEEERAAENVFIKKMEQEKLQKLARQGPGEQAAGSASEAKVAGATASASAESGPKVSEDK NRNYAVVAGVVAIVGSIGWYLKAGGKKQPEVQE Q9ZUX4 Gamma carbonic anhydrase-like 2, mitochondrial Arabidopsis thaliana 0.027985113 1 LEVO MATSLARISKRSITSAVSSNLIRRYFAAEAVAVATTETPKPKSQVTPSPDRVKWDYRGQRQIIPLGQWLPKVAVDAYVAP NVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTGLPAQTLIDRYVTVGAYSLLRSCTIEPEC IIGQHSILMEGSLVETRSILEAGSVLPPGRRIPSGELWGGNPARFIRTLTNEETLEIPKLAVAINHLSGDYFSEFLPYST IYLEVEKFKKSLGIAI Q9SMN1 Gamma carbonic anhydrase 2, mitochondrial Arabidopsis thaliana 0.030102207 1 LEVO MGTLGRAIYTVGNWIRGTGQALDRVGSLLQGSHRIEEHLSRHRTLMNVFDKSPLVDKDVFVAPSASVIGDVQIGKGSSIW YGCVLRGDVNNISVGSGTNIQDNTLVHVAKTNISGKVLPTLIGDNVTVGHSAVIHGCTVEDDAFVGMGATLLDGVVVEKH AMVAAGSLVKQNTRIPSGEVWGGNPAKFMRKLTDEEIVYISQSAKNYINLAQIHASENSKSFEQIEVERALRKKYARKDE DYDSMLGITRETPPELILPDNVLPGGKPVAKVPSTQYF Q9C6B3 4.2.1.- Gamma carbonic anhydrase 1, mitochondrial Arabidopsis thaliana 0.030010039 1 LEVO MGTLGRAFYSVGFWIRETGQALDRLGCRLQGKNYFREQLSRHRTLMNVFDKAPIVDKEAFVAPSASVIGDVHIGRGSSIW YGCVLRGDVNTVSVGSGTNIQDNSLVHVAKSNLSGKVHPTIIGDNVTIGHSAVLHGCTVEDETFIGMGATLLDGVVVEKH GMVAAGALVRQNTRIPSGEVWGGNPARFLRKLTDEEIAFISQSATNYSNLAQAHAAENAKPLNVIEFEKVLRKKHALKDE EYDSMLGIVRETPPELNLPNNILPDKETKRPSNVN Q9FWR5 4.2.1.- Ubiquinone-9 0.000795226 1 UQ9 PHOSPHATIDYLETHANOLAMINE 0.0007340389999999999 2 PTY Lauryl Maltose Neopentyl Glycol 0.001005188 1 LMN FE (III) ION 5.5845e-05 1 FE (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE 0.0007631 1 PC7 ZINC ION 6.5409e-05 1 ZN (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE 0.000751023 1 PGT 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE 0.000455437 1 PSF Phosphatidylinositol 0.000887128 1 T7X singleParticle particle 7.8 ETHANE FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K3 (6k x 4k) 43.0 1 PHASE FLIPPING AND AMPLITUDE CORRECTION 3.06 FSC 0.143 CUT-OFF 459177 MAXIMUM LIKELIHOOD MAXIMUM LIKELIHOOD emd_11872.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 0 0 0 600 600 600 502.2 502.2 502.2 90.0 90.0 90.0 X Y Z -0.027493287 0.056241017 0.000033608107 0.0007588884 0.837 0.837 0.837 0.013 AUTHOR emd_11872_half_map_2.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 0 0 0 600 600 600 502.2 502.2 502.2 90.0 90.0 90.0 X Y Z -0.01757857 0.039217953 -0.00006291244 0.0015698367 0.837 0.837 0.837 AUTHOR emd_11872_half_map_1.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 600 600 600 0 0 0 600 600 600 502.2 502.2 502.2 90.0 90.0 90.0 X Y Z -0.01802712 0.036420874 -0.00006463379 0.0015693989 0.837 0.837 0.837 AUTHOR