<?xml version="1.0" encoding="UTF-8"?>
<emd xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="https://ftp.ebi.ac.uk/pub/databases/em_ebi/emdb_related/emdb-schemas/emdb_schemas/v3/v3_0_9_3/emdb.xsd" version="3.0.9.3" emdb_id="EMD-11275">
    <admin>
        <current_status>
            <date>2024-07-10</date>
            <code>REL</code>
            <processing_site>PDBe</processing_site>
        </current_status>
        <sites>
            <deposition>PDBe</deposition>
            <last_processing>PDBe</last_processing>
        </sites>
        <key_dates>
            <deposition>2020-07-01</deposition>
            <header_release>2021-03-17</header_release>
            <map_release>2021-03-17</map_release>
            <update>2024-07-10</update>
        </key_dates>
        <grant_support>
            <grant_reference>
                <funding_body>Sao Paulo Research Foundation (FAPESP)</funding_body>
                <code>2011/52067-6</code>
                <country>Brazil</country>
            </grant_reference>
            <grant_reference>
                <funding_body>Sao Paulo Research Foundation (FAPESP)</funding_body>
                <code>2017/12436-9</code>
                <country>Brazil</country>
            </grant_reference>
            <grant_reference>
                <funding_body>French National Research Agency</funding_body>
                <code>ANR-18-CE11-0019</code>
                <country>France</country>
            </grant_reference>
            <grant_reference>
                <funding_body>Foundation for Medical Research (France)</funding_body>
                <code>DEQ20170336705</code>
                <country>France</country>
            </grant_reference>
            <grant_reference>
                <funding_body>Sao Paulo Research Foundation (FAPESP)</funding_body>
                <code>2015/19906-5</code>
                <country>Brazil</country>
            </grant_reference>
            <grant_reference>
                <funding_body>French National Research Agency</funding_body>
                <code>ANR-10-INBS-05-02</code>
                <country>France</country>
            </grant_reference>
            <grant_reference>
                <funding_body>French National Research Agency</funding_body>
                <code>ANR-17-EURE-0003</code>
                <country>France</country>
            </grant_reference>
        </grant_support>
        <title>MreC</title>
        <authors_list>
            <author>Estrozi LF</author>
            <author>Contreras-Martel C</author>
        </authors_list>
        <keywords>bacterial cell wall elongation, STRUCTURAL PROTEIN</keywords>
    </admin>
    <crossreferences>
        <citation_list>
            <primary_citation>
                <journal_citation published="true">
                    <author order="1">Martins A</author>
                    <author ORCID="0000-0003-1151-5766" order="2">Contreras-Martel C</author>
                    <author order="3">Janet-Maitre M</author>
                    <author order="4">Miyachiro MM</author>
                    <author ORCID="0000-0003-2548-2547" order="5">Estrozi LF</author>
                    <author ORCID="0000-0002-8005-8784" order="6">Trindade DM</author>
                    <author order="7">Malospirito CC</author>
                    <author order="8">Rodrigues-Costa F</author>
                    <author order="9">Imbert L</author>
                    <author order="10">Job V</author>
                    <author ORCID="0000-0002-1459-3201" order="11">Schoehn G</author>
                    <author order="12">Attree I</author>
                    <author ORCID="0000-0001-6487-4020" order="13">Dessen A</author>
                    <title>Self-association of MreC as a regulatory signal in bacterial cell wall elongation.</title>
                    <journal_abbreviation>Nat Commun</journal_abbreviation>
                    <country>UK</country>
                    <volume>12</volume>
                    <first_page>2987</first_page>
                    <last_page>2987</last_page>
                    <year>2021</year>
                    <external_references type="PUBMED">34016967</external_references>
                    <external_references type="DOI">doi:10.1038/s41467-021-22957-9</external_references>
                    <external_references type="ISSN">2041-1723</external_references>
                </journal_citation>
            </primary_citation>
        </citation_list>
        <pdb_list>
            <pdb_reference>
                <pdb_id>6zlv</pdb_id>
                <relationship>
                    <in_frame>FULLOVERLAP</in_frame>
                </relationship>
            </pdb_reference>
        </pdb_list>
    </crossreferences>
    <sample>
        <name>MreC</name>
        <supramolecule_list>
            <complex_supramolecule supramolecule_id="1">
                <name>MreC</name>
                <parent>0</parent>
                <macromolecule_list>
                    <macromolecule>
                        <macromolecule_id>1</macromolecule_id>
                    </macromolecule>
                </macromolecule_list>
                <natural_source database="NCBI">
                    <organism ncbi="287">Pseudomonas aeruginosa</organism>
                </natural_source>
            </complex_supramolecule>
        </supramolecule_list>
        <macromolecule_list>
            <protein_or_peptide macromolecule_id="1">
                <name>Rod shape-determining protein MreC</name>
                <natural_source database="NCBI">
                    <organism ncbi="287">Pseudomonas aeruginosa</organism>
                </natural_source>
                <molecular_weight>
                    <theoretical units="MDa">0.019054844</theoretical>
                </molecular_weight>
                <number_of_copies>4</number_of_copies>
                <recombinant_expression database="NCBI">
                    <recombinant_organism ncbi="469008">Escherichia coli BL21(DE3)</recombinant_organism>
                </recombinant_expression>
                <enantiomer>LEVO</enantiomer>
                <sequence>
                    <string>AALTEQNVRLRELLNSAALVDDKVLVSELIGVDPNPFTQRIMIDKGENDGVFVGQPVLDASGLMGQVVEVMPYTARVLLL
TDTTHSIPVQVNRNGLRAIAVGTGNPERLELRYVADTADIKEGDLLVSSGLGQRFPAGYPVATVKEVIHDSGQPFAVVRA
VPTAKMNRSRYVLLVF</string>
                    <external_references type="UNIPROTKB">A0A6A9K3A1</external_references>
                </sequence>
            </protein_or_peptide>
        </macromolecule_list>
    </sample>
    <structure_determination_list>
        <structure_determination structure_determination_id="1">
            <method>helical</method>
            <aggregation_state>helicalArray</aggregation_state>
            <specimen_preparation_list>
                <helical_preparation preparation_id="1">
                    <buffer>
                        <ph>8.0</ph>
                    </buffer>
                    <grid>
                        <model>Quantifoil</model>
                        <material>COPPER</material>
                        <mesh>300</mesh>
                        <support_film film_type_id="1">
                            <film_material>CARBON</film_material>
                            <film_topology>HOLEY</film_topology>
                        </support_film>
                        <pretreatment>
                            <type>GLOW DISCHARGE</type>
                            <time units="s">45</time>
                        </pretreatment>
                        <details>30 mA</details>
                    </grid>
                    <vitrification>
                        <cryogen_name>ETHANE</cryogen_name>
                        <chamber_humidity units="percentage">100</chamber_humidity>
                        <chamber_temperature units="K">293</chamber_temperature>
                        <instrument>FEI VITROBOT MARK IV</instrument>
                    </vitrification>
                </helical_preparation>
            </specimen_preparation_list>
            <microscopy_list>
                <helical_microscopy microscopy_id="1">
                    <microscope>TFS GLACIOS</microscope>
                    <illumination_mode>FLOOD BEAM</illumination_mode>
                    <imaging_mode>BRIGHT FIELD</imaging_mode>
                    <electron_source>FIELD EMISSION GUN</electron_source>
                    <acceleration_voltage units="kV">200</acceleration_voltage>
                    <nominal_cs units="mm">2.7</nominal_cs>
                    <nominal_defocus_min units="µm">0.8</nominal_defocus_min>
                    <nominal_defocus_max units="µm">3.5</nominal_defocus_max>
                    <nominal_magnification>120000.0</nominal_magnification>
                    <cooling_holder_cryogen>NITROGEN</cooling_holder_cryogen>
                    <image_recording_list>
                        <image_recording image_recording_id="1">
                            <film_or_detector_model>FEI FALCON II (4k x 4k)</film_or_detector_model>
                            <detector_mode>COUNTING</detector_mode>
                            <digitization_details>
                                <frames_per_image>2-20</frames_per_image>
                            </digitization_details>
                            <number_real_images>1200</number_real_images>
                            <average_electron_dose_per_image units="e/Å^2">43.0</average_electron_dose_per_image>
                        </image_recording>
                    </image_recording_list>
                </helical_microscopy>
            </microscopy_list>
            <helical_processing image_processing_id="1">
                <image_recording_id>1</image_recording_id>
                <final_reconstruction>
                    <applied_symmetry>
                        <helical_parameters>
                            <delta_z units="Å">10.35</delta_z>
                            <delta_phi units="deg">62.997637589</delta_phi>
                            <axial_symmetry>D2</axial_symmetry>
                        </helical_parameters>
                    </applied_symmetry>
                    <algorithm>FOURIER SPACE</algorithm>
                    <resolution units="Å" res_type="BY AUTHOR">3.5</resolution>
                    <resolution_method>FSC 0.143 CUT-OFF</resolution_method>
                    <software_list>
                        <software>
                            <name>RELION</name>
                        </software>
                    </software_list>
                    <number_images_used>91840</number_images_used>
                </final_reconstruction>
                <segment_selection>
                    <number_selected>111624</number_selected>
                    <software_list>
                        <software>
                            <name>RELION</name>
                            <version>3.0</version>
                        </software>
                    </software_list>
                </segment_selection>
                <startup_model type_of_model="INSILICO MODEL">
                    <insilico_model>SPRING (Segclassreconstruct) and Relion 2D class averages.</insilico_model>
                </startup_model>
                <final_angle_assignment>
                    <type>NOT APPLICABLE</type>
                    <software_list>
                        <software>
                            <name>RELION</name>
                        </software>
                    </software_list>
                </final_angle_assignment>
            </helical_processing>
        </structure_determination>
    </structure_determination_list>
    <map format="CCP4" size_kbytes="162831">
        <file>emd_11275.map.gz</file>
        <symmetry>
            <space_group>1</space_group>
        </symmetry>
        <data_type>IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)</data_type>
        <dimensions>
            <col>344</col>
            <row>344</row>
            <sec>344</sec>
        </dimensions>
        <origin>
            <col>-172</col>
            <row>-172</row>
            <sec>-172</sec>
        </origin>
        <spacing>
            <x>344</x>
            <y>344</y>
            <z>344</z>
        </spacing>
        <cell>
            <a units="Å">414.86398</a>
            <b units="Å">414.86398</b>
            <c units="Å">414.86398</c>
            <alpha units="deg">90.0</alpha>
            <beta units="deg">90.0</beta>
            <gamma units="deg">90.0</gamma>
        </cell>
        <axis_order>
            <fast>X</fast>
            <medium>Y</medium>
            <slow>Z</slow>
        </axis_order>
        <statistics>
            <minimum>-0.054834697</minimum>
            <maximum>0.17393795</maximum>
            <average>0.0002928533</average>
            <std>0.010438674</std>
        </statistics>
        <pixel_spacing>
            <x units="Å">1.206</x>
            <y units="Å">1.206</y>
            <z units="Å">1.206</z>
        </pixel_spacing>
        <contour_list>
            <contour primary="true">
                <level>0.045</level>
                <source>AUTHOR</source>
            </contour>
        </contour_list>
        <label>::::EMDATABANK.org::::EMD-11275::::</label>
        <annotation_details>MreC</annotation_details>
    </map>
</emd>
