2024-10-23 REL PDBe PDBe PDBe 2020-05-27 2021-01-13 2021-01-13 2024-10-23 Biotechnology and Biological Sciences Research Council (BBSRC) BB/M000265/1 United Kingdom RC-LH1(16) complex from Rhodopseudomonas palustris Swainsbury DJK Qian P Reaction center, Light harvesting, Protein W, Quinone, PHOTOSYNTHESIS Swainsbury DJK Qian P Jackson PJ Faries KM Niedzwiedzki DM Martin EC Farmer DA Malone LA Thompson RF Ranson NA Canniffe DP Dickman MJ Holten D Kirmaier C Hitchcock A Hunter CN Structures of Rhodopseudomonas palustris RC-LH1 complexes with open or closed quinone channels. Sci Adv US 7 2021 33523887 doi:10.1126/sciadv.abe2631 2375-2548 6z5r FULLOVERLAP Reaction center-Light harvesting complex 1 Reaction center-Light harvesting complex 1 0 1 2 3 4 5
Reaction center-Light harvesting complex 1 from Rhodopseudomonas palustris
Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) Lamellar membranes 3.52 Light-harvesting complex 1 alpha chain Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) ATCC BAA-98 / CGA009 0.005779998999999999 16 LEVO (FME)WRIWLLFDPRRALVLLFVFLFGLAIIIHFILLSTSRFNWLDGPRAAK Q6N9L4 Light-harvesting complex 1 beta chain Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) ATCC BAA-98 / CGA009 0.0058497969999999995 16 LEVO MSDGSISGLSEAEAKEFHSIFVTSFFLFIVVAVVAHILAWMWRPWLPKATGY Q6N9L5 H subunit of photosynthetic reaction center complex Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) ATCC BAA-98 / CGA009 0.027268223 1 LEVO MQPGAYLDLAQVTLYVFWIFFAGLLFYLRREDKREGYPLVADAGSGTRLAKIGVPAPPDPKTYLLRGGATKTVPSTSNDR PNVALTPAAPWPGAPFVPTGNPFADGVGPGSYAQRADVPELGLDNLPIIVPLRAAKGMFLDPRDPNPVGMPVVGCDGVVG GTVTEVWVDRAEVLARYLEVEVAKSRKRVLLPVPFALINDPFGKVSVDAIRGDQFAGVPTTSKGDQVSKLEEDKICAYYG AGTLYATPLRSESLV A0A4Z9 Reaction center protein L chain Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) ATCC BAA-98 / CGA009 0.030857776999999996 1 LEVO MAMLSFEKKYRVRGGTLIGGDLFDFWVGPFYVGIFGVMTVFFALIGIALIAWNTALGPTWNLWQISVNPPDAKYGLGFAP LAEGGIWQWVSICATGAFVTWALREVEICRKLGIGFHVPFAFSFAIFAYVTLVVIRPVLMGSWSYGFPYGIFTHLDWVSN TGYSYGQFHYNPAHMIAITFFFTTCLALALHGGLVLSALNPDRGEPVKSPEHENTVFRDLVGYSIGTIGIHRLGLFLALS AVFFSAVCMIISGPVLAEGGSWPDWWNWWRNLPIWNP O83005 Reaction center protein M chain Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) ATCC BAA-98 / CGA009 0.034453828 1 LEVO MAQYQNIFTQVQVEGPAYAGVPLRPGSSPRETQTTFNYWLGKIGDAQVGPVYLGFTGVCSLLCGFVAIEIIGLNMLASVD WSPIEFLRQFCWLALEPPKPEYGLTIPPLKEGGWWLMAGFFLTVSIALWWVRTYRRSRALGMGTHVSWAFASAILLYLAL GFIQPLLMGSWSEAPPFGVFPHLDWTNNFSIKYGNLYYNPFHCLSIAFLYGSALLFAMHGATILAVSRYGGEREIEQMLD RGTALERAALFWRWTMGFNATAESIHRWAWWFAVLCPLTGAIGIILTGPVVDNWFDWGVKHGLAPPR A0A4Z7 BACTERIOCHLOROPHYLL A 0.0009115039999999999 36 BCL SPIRILLOXANTHIN 0.0005969249999999999 16 CRT (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE 0.0007631 24 6PL CARDIOLIPIN 0.0014640429999999997 6 CDL DODECYL-BETA-D-MALTOSIDE 0.000510615 12 LMT BACTERIOPHEOPHYTIN A 0.000889215 2 BPH UBIQUINONE-10 0.0008633429999999999 5 U10 FE (III) ION 5.5845e-05 1 FE (6~{R},10~{S},14~{R},19~{R},23~{S},24~{E},27~{S},28~{E})-2,6,10,14,19,23,27,31-octamethyldotriaconta-24,28-dien-2-ol 0.000575047 1 QAK (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE 0.000751023 2 PGT water 1.8015e-05 3 HOH singleParticle particle 8.0 20.0 C4H11NO3 Tris 200.0 NaCl NaCl 0.03 C24H46O11 n-Dodecyl-beta-D-Maltopyranoside Quantifoil R1.2/1.3 COPPER 400 CARBON HOLEY GLOW DISCHARGE AIR ETHANE 60 298 LEICA EM GP
This sample was monodisperse
 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 GATAN K2 SUMMIT (4k x 4k) COUNTING 55.2 1 476547
Autopicked in RELION
 2 C1 FOURIER SPACE 2.8 FSC 0.143 CUT-OFF RELION 3.0 260752 MAXIMUM LIKELIHOOD RELION 3.0 MAXIMUM LIKELIHOOD RELION 3.0 4 RELION 3.0 emd_11080.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 400 400 400 0 0 0 400 400 400 426.00003 426.00003 426.00003 90.0 90.0 90.0 X Y Z -0.24812172 0.90050465 0.0012294633 0.017340476 1.065 1.065 1.065 0.18 AUTHOR BACKBONE TRACE REAL