2024-05-22 REL PDBe PDBe PDBe 2020-05-26 2020-10-14 2020-10-14 2024-05-22 Medical Research Council (MRC, United Kingdom) MC_UP_1201/16 United Kingdom European Research Council (ERC) ERC-CoG-648432 European Union German Research Foundation (DFG) 240245660 - SFB1129 Germany Helical reconstruction of influenza A virus M1 in complex with nucleic acid Xiong X Qu K Briggs JAG M1, Matrix protein, Influenza virus, Assembly, ribonucleoprotein complex, VIRAL PROTEIN Peukes J Xiong X Erlendsson S Qu K Wan W Calder LJ Schraidt O Kummer S Freund SMV Krausslich HG Briggs JAG The native structure of the assembled matrix protein 1 of influenza A virus. Nature UK 587 495 498 2020 32908308 doi:10.1038/s41586-020-2696-8 1476-4687 0006 NATUAS Peukes J Xiong X Erlendsson S Qu K Wan W Calder LJ Schraidt O Kummer S Freund SMV Krausslich HG Briggs JAG The native structure of the full-length, assembled influenza A virus matrix protein, M1. Biorxiv US 2020 doi:10.1101/2020.06.24.168567 2692-8205 6z5l FULLOVERLAP Helical reconstruction of influenza A virus M1 protein in complex with nucleic acid Helical reconstruction of influenza A virus M1 protein in complex with nucleic acid 0 1
Influenza A M1 in complex with 6.4 Kb DNA plasmid
Influenza A virus (strain A/Puerto Rico/8/1934 H1N1) 0.028 Matrix protein 1 Influenza A virus (strain A/Puerto Rico/8/1934 H1N1) 0.02897143 1 Escherichia coli BL21(DE3) LEVO MSLLTEVETYVLSIIPSGPLKAEIAQRLEDVFAGKNTDLEVLMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFV QNALNGNGDPNNMDKAVKLYRKLKREITFHGAKEISLSYSAGALASCMGLIYNKMGAVTTEVAFGLVCATCEQIADSQHR SHRQMVTTTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVASQARQMVQAMRTIGTHPSSSAGLKNDLLENLQAY QKRMGVQMQRFKLEHHHHHH P03485 helical helicalArray 0.1 10.0 150.0 NaCl sodium chloride 100.0 C2H5NO2 glycine C-flat-2/2 COPPER 200 CARBON HOLEY ARRAY GLOW DISCHARGE AIR ETHANE 100 298 FEI VITROBOT MARK IV
sample was applied 3 times each with 30s adsorption time.
M1 at 0.1 mg/ml plasmid DNA at 0.25 mg/ml
 FEI TITAN KRIOS FLOOD BEAM BRIGHT FIELD FIELD EMISSION GUN 300 2.7 1.0 3.0 105000.0 FEI TITAN KRIOS AUTOGRID HOLDER NITROGEN GIF Quantum LS 20 GATAN K2 SUMMIT (4k x 4k) COUNTING 1 2347 47.1 1 1 3.08413 -11.1081 D1 FOURIER SPACE 3.8 FSC 0.143 CUT-OFF RELION 3.08 17984 463152 SPRING 0.86 Used for selecting segments of similar diameters
Manual picking
 NOT APPLICABLE RELION 3.08 emd_11079.map.gz 1 IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES) 500 500 500 0 0 0 500 500 500 564.0 564.0 564.0 90.0 90.0 90.0 X Y Z -0.01972976 0.052892283 0.0007184917 0.0037097456 1.128 1.128 1.128 0.0114 AUTHOR symmetrised helical reconstruction map 1AA7 A PDB experimental model AB INITIO MODEL correlation coefficient REAL 37.899999999999999 emd_11079_msk_1.map