Cryo-EM structure of Omicron BA.1 RBD complexed with ConBA-998,S309 and S304Fabs

alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose

N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE

blot time:4s
wait time:2.5s
blot force:0

VQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYM
ELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSS

EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLE
PEDFAVYYCQQHDTSLTFGGGTKVEIK

EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYDMHWVRQTTGKGLEWVSTIGTAGDTYYPDSVKGRFTISREDAKNSLYL
QMNSLRAGDTAVYYCARGDSSGYYYYFDYWGQGTLLTVS

DIQMTQSPSSLSAAVGDRVTITCRASQSIGSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQP
EDFAIYYCQQSYVSPTYTFGPGTKVDIK

EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGDTYYPDSVQGRFTISRDNSKNTLYL
QMNSLRAEDTAVYYCARSPTPPDGFDIWGQGTLVTVSS

PFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTG
NIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYG
FRPTYGVGHQPYRVVVLSFEL

SYVLTQPPSVSVAPGKTARISCGGNNIGSYSAHWYQQRPGQAPVLVIYYDSDRPSGIPERFSGSNSGNTATLTISRVEAG
DEADYYCQVWDSSSDHWVFGGGTKLTVL

Severe acute respiratory syndrome coronavirus 2

National Natural Science Foundation of China (NSFC)

REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)

Omicron BA.1 RBD, ConBA-998 Fab, S304 Fab, S309 Fab, VIRAL PROTEIN/IMMUNE SYSTEM, VIRAL PROTEIN-IMMUNE SYSTEM complex

PFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTG
KIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYG
FQPTNGVGYQPYRVVVLSFEL