Rhinovirus C15 complexed with domains I and II of receptor CDHR3

Cryo-EM structure of rhinovirus C15a bound to its cadherin-related protein 3 receptor.

Residues PRO U 67 and LEU U 68 that are next to each other in the sample sequence are not properly linked.

Complex of rhinovirus C15 with domain I and domain II (EC1-2) from human CDHR3

domain I and domain II (EC1-2) from human CDHR3

Recombinantly expressed EC1-2 was incubated with RV-C viruses overnight at 4 degrees C.

3 second blotting time. Instrument placed in BSL2 hood.

extracellular cadherin-like domains 1-2 (UNP residues 20-237)

NNDDPVENFVESTLKEVLVVPDTKPSGPQHTTKPSILGAMEIGASSNATPESTIETRYVYNTNTNAEADVEMFLGRSALW
GKVTLTRQYAKWEINFQEQAHIRKKFEFFTYLRFDMEVTIVTNNKGLMQIMFVPPGIDHPETHDDRKWDSASNPSVFFQP
KSGFPRFTIPFTGLASAYYMFYDGYDKPKGSDNNEYGIAPTNDMGLLCFRTLDNSGGNDVKIYVKPKHITAWVPRPPRAT
QYTHKYSTNYHYKPNSSGPDEHVLKDRHFIKTRPLISSA

GLPTRLPSGSQQFMTTEDEQSPNILPGFHPSKKIHIPGMITNVMHMARVDSFIPINNIQGEVGKVSMYYITVTKKTVTER
ILVLPLEMSNTLFATTLLGEVLNYYANWSGSITITFMCVCDAFSTGKFLVAYTPPGGKLPEDRKQAMLGVHIIWDLGLQS
SCTIVVPWISSGFYRRTKADSFTHGGYVSLWYQTAFVPPVSGGTGSILATCSACPDMSVRMLRDSPMMEQKNELQ

SPSVEACGYSDRLKQITIGNSTITTQDSLHTVLAYGEWPTYLSDIDATSVDKPTHPETSADRFYTLDSVEWQVGSHGWWW
KLPDALKDMGVFGQNMYYHSMGRSGFIIHTQCNATKFHSGALIVAVIPEHQLAYVGGVKVNVGYDHTHPGQSGHQIRGPS
QSNDRSGGKPDEDPLFNCNGTLLGNITIFPHQIINLRTNNSSTIVVPYINCVPMDNMLKHNNLSLVIIPLVPLRPGSSGI
NSVPITVTIAPYKSEFSGAMEAQRQ

MASDYKDDDDKLHLILLPATGNVAENSPPGTSVHKFSVKLSASLSPVIPGFPQIVNSNPLTEAFRVNWLSGTYFEVVTTG
MEQLDFETGPNIFDLQIYVKDEVGVTDLQVLTVQVTDVNEPPQFQGNLAEGLHLYIVERANPGFIYQVEAFDPEDTSRNI
PLSYFLISPPKSFRMSANGTLFSTTELDFEAGHRSFHLIVEVRDSGGLKASTELQVNIVNLNDEVPRFTGGTKHHHHHH

National Science Foundation (NSF, United States)

icosahedral asymmetric unit, std point frame

receptor, cadherin, VIRUS-CELL ADHESION complex

NNDDPVENFVESTLKEVLVVPDTKPSGPQHTTKPSILGAMEIGASSNATPESTIETRYVYNTNTNAEADVEMFLGRSALW
GKVTLTRQYAKWEINFQEQAHIRKKFEFFTYLRFDMEVTIVTNNTGLMQIMFVPPGIDHPETHDDRKWDSASNPSVFFQP
KSGFPRFTIPFTGLASAYYMFYDGYDKPKGSDNNEYGIAPTNDMGLLCFRTLDNSGGNDVKIYVKPKHITAWVPRPPRAT
QYTHKYSTNYHYKPNSSGPDEHVLKDRHFIKTRPLISSA

LHLILLPATGNVAENSPPGTSVHKFSVKLSASLSPVIPGFPQIVNSNPLTEAFRVNWLSGTYFEVVTTGMEQLDFETGPN
IFDLQIYVKDEVGVTDLQVLTVQVTDVNEPPQFQGNLAEGLHLYIVERANPGFIYQVEAFDPEDTSRNIPLSYFLISPPK
SFRMSANGTLFSTTELDFEAGHRSFHLIVEVRDSGGLKASTELQVNIVNLNDEVPRFT