The crystal structure of DfoJ, the desferrioxamine biosynthetic pathway lysine decarboxylase from the fire blight disease pathogen Erwinia amylovora

A complete structural characterization of the desferrioxamine E biosynthetic pathway from the fire blight pathogen Erwinia amylovora.

Putative decarboxylase involved in desferrioxamine biosynthesis

GAMVPGSQTSPVSALPPDCGTGNPHDFIFNDHQLSAWARQTEQVLALMTETVKGVEKPFSGILPHELAREFSGVDLDQSL
GSNEAALEELKKLYLRDAVWFHHPKYVAHLNCPVVLPSLLAEQIMAAVNSSVDTWDQSAGGTLIEQKVIDWTLSRIGLPA
GADGIFTSGGTQSNLMAMLLARDSWCAAHHPGHLIKHRGLPHDAAKWRVFTSKLSHFSIQKSMAILGLGYDAVIPVDYDE
RYRMDVDCLKQEVQRCLQQGLIPVAVVATSGTTDFGSIDPLGAISELCKHHGMWMHVDAAYGCGLLVSESHRPRLAGIEK
ADSVTVDYHKSFFQTVSCGAFFVRDKHHLSHVTHHADYLNPLSAQQEGTPNLVNKSIQTTRRFDALKMWLTLRVSGPMAL
GNAFDDILALTQIAHQLLNAHPAIEVLHVPELTTQIFRYVPRPGMNDALTDEINTNIRKAVFRSGNAVIAGTKVNGRQYL
KFTLLNPNTTAADIEDVIALIVHYGREQVRGPAVTTAPL

virelunce and pathogenesys of Erwinia amylovora

HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
siderophore biosynthesis, E.C. 4.1.1.18, group II PLP-dependent enzyme, aspartate aminotransferase family type 1 fold subclass II, lyase

MVPGSQTSPVSALPPDCGTGNPHDFIFNDHQLSAWARQTEQVLALMTETVKGVEKPFSGILPHELAREFSGVDLDQSLGS
NEAALEELKKLYLRDAVWFHHPKYVAHLNCPVVLPSLLAEQIMAAVNSSVDTWDQSAGGTLIEQKVIDWTLSRIGLPAGA
DGIFTSGGTQSNLMAMLLARDSWCAAHHPGHLIKHRGLPHDAAKWRVFTSKLSHFSIQKSMAILGLGYDAVIPVDYDERY
RMDVDCLKQEVQRCLQQGLIPVAVVATSGTTDFGSIDPLGAISELCKHHGMWMHVDAAYGCGLLVSESHRPRLAGIEKAD
SVTVDYHKSFFQTVSCGAFFVRDKHHLSHVTHHADYLNPLSAQQEGTPNLVNKSIQTTRRFDALKMWLTLRVSGPMALGN
AFDDILALTQIAHQLLNAHPAIEVLHVPELTTQIFRYVPRPGMNDALTDEINTNIRKAVFRSGNAVIAGTKVNGRQYLKF
TLLNPNTTAADIEDVIALIVHYGREQVRGPAVTTAPL

binding site for Di-peptide PLP C 601 and LYS C 328
binding site for Di-peptide PLP E 601 and LYS E 328
binding site for Di-peptide PLP F 601 and LYS F 328