The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
type: datablock
alternative label: 5K8H
link to mmcif: 5K8H.cif.gz
link to pdbml: 5K8H.xml.gz
link to pdbml noatom: 5K8H-noatom.xml.gz
link to pdbml extatom: 5K8H-extatom.xml.gz
link to doi: doi:10.2210/pdb5K8H/pdb
datablock name: 5K8H-noatom
has atom sites category: atom sitesCategory
has atom type category: atom typeCategory
has audit author category: audit authorCategory
has audit conform category: audit conformCategory
has cell category: cellCategory
has chem comp category: chem compCategory
has chem comp atom category: chem comp atomCategory
has chem comp bond category: chem comp bondCategory
has citation category: citationCategory
has citation author category: citation authorCategory
has database 2 category: database 2Category
has diffrn category: diffrnCategory
has diffrn detector category: diffrn detectorCategory
has diffrn radiation category: diffrn radiationCategory
has diffrn radiation wavelength category: diffrn radiation wavelengthCategory
has diffrn source category: diffrn sourceCategory
has entity category: entityCategory
has entity poly category: entity polyCategory
has entity poly seq category: entity poly seqCategory
has entry category: entryCategory
has exptl category: exptlCategory
has exptl crystal category: exptl crystalCategory
has exptl crystal grow category: exptl crystal growCategory
has ndb struct conf na category: ndb struct conf naCategory
has ndb struct na base pair category: ndb struct na base pairCategory
has ndb struct na base pair step category: ndb struct na base pair stepCategory
has pdbx audit revision category category: pdbx audit revision categoryCategory
has pdbx audit revision details category: pdbx audit revision detailsCategory
has pdbx audit revision group category: pdbx audit revision groupCategory
has pdbx audit revision history category: pdbx audit revision historyCategory
has pdbx audit revision item category: pdbx audit revision itemCategory
has pdbx audit support category: pdbx audit supportCategory
has pdbx database status category: pdbx database statusCategory
has pdbx entity nonpoly category: pdbx entity nonpolyCategory
has pdbx entity src syn category: pdbx entity src synCategory
has pdbx initial refinement model category: pdbx initial refinement modelCategory
has pdbx nonpoly scheme category: pdbx nonpoly schemeCategory
has pdbx poly seq scheme category: pdbx poly seq schemeCategory
has pdbx struct assembly category: pdbx struct assemblyCategory
has pdbx struct assembly gen category: pdbx struct assembly genCategory
has pdbx struct oper list category: pdbx struct oper listCategory
has pdbx unobs or zero occ residues category: pdbx unobs or zero occ residuesCategory
has pdbx validate rmsd angle category: pdbx validate rmsd angleCategory
has pdbx validate rmsd bond category: pdbx validate rmsd bondCategory
has pdbx validate symm contact category: pdbx validate symm contactCategory
has refine category: refineCategory
has refine hist category: refine histCategory
has refine ls shell category: refine ls shellCategory
has reflns category: reflnsCategory
has reflns shell category: reflns shellCategory
has software category: softwareCategory
has struct category: structCategory
has struct asym category: struct asymCategory
has struct biol category: struct biolCategory
has struct conn category: struct connCategory
has struct conn type category: struct conn typeCategory
has struct keywords category: struct keywordsCategory
has struct ref category: struct refCategory
has struct ref seq category: struct ref seqCategory
has struct site category: struct siteCategory
has struct site gen category: struct site genCategory
has symmetry category: symmetryCategory

5K8H
type: atom sites
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entry: 5K8H
atom sites.entry id: 5K8H
atom sites.fract transf matrix11: 0.047053
atom sites.fract transf matrix12: 0
atom sites.fract transf matrix13: 0
atom sites.fract transf matrix21: 0
atom sites.fract transf matrix22: 0.047053
atom sites.fract transf matrix23: 0
atom sites.fract transf matrix31: 0
atom sites.fract transf matrix32: 0
atom sites.fract transf matrix33: 0.066908
atom sites.fract transf vector1: 0
atom sites.fract transf vector2: 0
atom sites.fract transf vector3: 0

5K8H
referenced by atom sites: 5K8H
referenced by cell: 5K8H
type: entry
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
entry.id: 5K8H
referenced by exptl: 5K8H,X-RAY DIFFRACTION
referenced by refine: 5K8H,X-RAY DIFFRACTION
referenced by reflns: http://rdf.wwpdb.org/pdb/5K8H/reflns/1
referenced by struct: 5K8H
referenced by struct keywords: 5K8H
referenced by symmetry: 5K8H
referenced by pdbx database status: 5K8H
referenced by ndb struct conf na: 5K8H,double helix

http://rdf.wwpdb.org/pdb/5K8H/atom_type/C
type: atom type
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
atom type.symbol: C

http://rdf.wwpdb.org/pdb/5K8H/atom_type/H
type: atom type
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
atom type.symbol: H

http://rdf.wwpdb.org/pdb/5K8H/atom_type/N
type: atom type
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
atom type.symbol: N

http://rdf.wwpdb.org/pdb/5K8H/atom_type/O
type: atom type
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
atom type.symbol: O

http://rdf.wwpdb.org/pdb/5K8H/atom_type/P
type: atom type
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
atom type.symbol: P

http://rdf.wwpdb.org/pdb/5K8H/audit_author/1
type: audit author
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
audit author.pdbx ordinal: 1
audit author.name: Gleghorn, M.L.

http://rdf.wwpdb.org/pdb/5K8H/audit_author/2
type: audit author
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
audit author.pdbx ordinal: 2
audit author.name: Maquat, L.E.

mmcif pdbx.dic,5.379
type: audit conform
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
audit conform.dict name: mmcif_pdbx.dic
audit conform.dict version: 5.379
audit conform.dict location: http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic

5K8H
type: cell
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entry: 5K8H
cell.entry id: 5K8H
cell.z PDB: 8
cell.angle alpha: 90
cell.angle beta: 90
cell.angle gamma: 90
cell.length a: 21.253
cell.length b: 21.253
cell.length c: 14.946

http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
type: chem comp
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
chem comp.id: A
chem comp.formula: C10 H14 N5 O7 P
chem comp.formula weight: 347.221
chem comp.mon nstd flag: y
chem comp.name: ADENOSINE-5'-MONOPHOSPHATE
chem comp.type: RNA linking
link to chem comp: http://rdf.wwpdb.org/cc/A
referenced by chem comp atom: H2,A
referenced by chem comp bond: N3,C4,A
referenced by entity poly seq: 1,A,7
referenced by pdbx unobs or zero occ residues: http://rdf.wwpdb.org/pdb/5K8H/pdbx_unobs_or_zero_occ_residues/5
referenced by chem comp atom: OP3,A
referenced by chem comp atom: P,A
referenced by chem comp atom: OP1,A
referenced by chem comp atom: OP2,A
referenced by chem comp atom: O5&#39;,A
referenced by chem comp atom: C5&#39;,A
referenced by chem comp atom: C4&#39;,A
referenced by chem comp atom: O4&#39;,A
referenced by chem comp atom: C3&#39;,A
referenced by chem comp atom: O3&#39;,A
referenced by chem comp atom: C2&#39;,A
referenced by chem comp atom: O2&#39;,A
referenced by chem comp atom: C1&#39;,A
referenced by chem comp atom: N9,A
referenced by chem comp atom: C8,A
referenced by chem comp atom: N7,A
referenced by chem comp atom: C5,A
referenced by chem comp atom: C6,A
referenced by chem comp atom: N6,A
referenced by chem comp atom: N1,A
referenced by chem comp atom: C2,A
referenced by chem comp atom: N3,A
referenced by chem comp atom: C4,A
referenced by chem comp atom: HOP3,A
referenced by chem comp atom: HOP2,A
referenced by chem comp atom: H5&#39;,A
referenced by chem comp atom: H5&#39;&#39;,A
referenced by chem comp atom: H4&#39;,A
referenced by chem comp atom: H3&#39;,A
referenced by chem comp atom: HO3&#39;,A
referenced by chem comp atom: H2&#39;,A
referenced by chem comp atom: HO2&#39;,A
referenced by chem comp atom: H1&#39;,A
referenced by chem comp atom: H8,A
referenced by chem comp atom: H61,A
referenced by chem comp atom: H62,A
referenced by chem comp bond: OP3,P,A
referenced by chem comp bond: OP3,HOP3,A
referenced by chem comp bond: P,OP1,A
referenced by chem comp bond: P,OP2,A
referenced by chem comp bond: P,O5&#39;,A
referenced by chem comp bond: OP2,HOP2,A
referenced by chem comp bond: O5&#39;,C5&#39;,A
referenced by chem comp bond: C5&#39;,C4&#39;,A
referenced by chem comp bond: C5&#39;,H5&#39;,A
referenced by chem comp bond: C5&#39;,H5&#39;&#39;,A
referenced by chem comp bond: C4&#39;,O4&#39;,A
referenced by chem comp bond: C4&#39;,C3&#39;,A
referenced by chem comp bond: C4&#39;,H4&#39;,A
referenced by chem comp bond: O4&#39;,C1&#39;,A
referenced by chem comp bond: C3&#39;,O3&#39;,A
referenced by chem comp bond: C3&#39;,C2&#39;,A
referenced by chem comp bond: C3&#39;,H3&#39;,A
referenced by chem comp bond: O3&#39;,HO3&#39;,A
referenced by chem comp bond: C2&#39;,O2&#39;,A
referenced by chem comp bond: C2&#39;,C1&#39;,A
referenced by chem comp bond: C2&#39;,H2&#39;,A
referenced by chem comp bond: O2&#39;,HO2&#39;,A
referenced by chem comp bond: C1&#39;,N9,A
referenced by chem comp bond: C1&#39;,H1&#39;,A
referenced by chem comp bond: N9,C8,A
referenced by chem comp bond: N9,C4,A
referenced by chem comp bond: C8,N7,A
referenced by chem comp bond: C8,H8,A
referenced by chem comp bond: N7,C5,A
referenced by chem comp bond: C5,C6,A
referenced by chem comp bond: C5,C4,A

HOH
type: chem comp
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
chem comp.id: HOH
chem comp.formula: H2 O
chem comp.formula weight: 18.015
chem comp.name: WATER
chem comp.type: non-polymer
link to chem comp: HOH
referenced by chem comp atom: H2,HOH
referenced by chem comp bond: O,H2,HOH
referenced by chem comp atom: O,HOH
referenced by chem comp atom: H1,HOH
referenced by chem comp bond: O,H1,HOH

NH4
type: chem comp
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
chem comp.id: NH4
chem comp.formula: H4 N 1
chem comp.formula weight: 18.038
chem comp.name: AMMONIUM ION
chem comp.type: non-polymer
link to chem comp: NH4
referenced by chem comp atom: HN4,NH4
referenced by chem comp bond: N,HN4,NH4
referenced by chem comp atom: N,NH4
referenced by chem comp atom: HN1,NH4
referenced by chem comp atom: HN2,NH4
referenced by chem comp atom: HN3,NH4
referenced by chem comp bond: N,HN1,NH4
referenced by chem comp bond: N,HN2,NH4
referenced by chem comp bond: N,HN3,NH4

OP3,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: OP3
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 1
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: O
referenced by chem comp bond: OP3,HOP3,A
referenced by chem comp bond: OP3,P,A

P,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: P
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 2
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: P
referenced by chem comp bond: P,O5&#39;,A
referenced by chem comp bond: OP3,P,A
referenced by chem comp bond: P,OP1,A
referenced by chem comp bond: P,OP2,A

OP1,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: OP1
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 3
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: O
referenced by chem comp bond: P,OP1,A

OP2,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: OP2
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 4
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: O
referenced by chem comp bond: OP2,HOP2,A
referenced by chem comp bond: P,OP2,A

O5&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: O5'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 5
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: O
referenced by chem comp bond: O5&#39;,C5&#39;,A
referenced by chem comp bond: P,O5&#39;,A

C5&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: C5'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 6
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: C
referenced by chem comp bond: C5&#39;,H5&#39;&#39;,A
referenced by chem comp bond: O5&#39;,C5&#39;,A
referenced by chem comp bond: C5&#39;,C4&#39;,A
referenced by chem comp bond: C5&#39;,H5&#39;,A

C4&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: C4'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 7
chem comp atom.pdbx stereo config: R
chem comp atom.type symbol: C
referenced by chem comp bond: C4&#39;,H4&#39;,A
referenced by chem comp bond: C5&#39;,C4&#39;,A
referenced by chem comp bond: C4&#39;,O4&#39;,A
referenced by chem comp bond: C4&#39;,C3&#39;,A

O4&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: O4'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 8
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: O
referenced by chem comp bond: O4&#39;,C1&#39;,A
referenced by chem comp bond: C4&#39;,O4&#39;,A

C3&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: C3'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 9
chem comp atom.pdbx stereo config: S
chem comp atom.type symbol: C
referenced by chem comp bond: C3&#39;,H3&#39;,A
referenced by chem comp bond: C4&#39;,C3&#39;,A
referenced by chem comp bond: C3&#39;,O3&#39;,A
referenced by chem comp bond: C3&#39;,C2&#39;,A

O3&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: O3'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 10
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: O
referenced by chem comp bond: O3&#39;,HO3&#39;,A
referenced by chem comp bond: C3&#39;,O3&#39;,A

C2&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: C2'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 11
chem comp atom.pdbx stereo config: R
chem comp atom.type symbol: C
referenced by chem comp bond: C2&#39;,H2&#39;,A
referenced by chem comp bond: C3&#39;,C2&#39;,A
referenced by chem comp bond: C2&#39;,O2&#39;,A
referenced by chem comp bond: C2&#39;,C1&#39;,A

O2&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: O2'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 12
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: O
referenced by chem comp bond: O2&#39;,HO2&#39;,A
referenced by chem comp bond: C2&#39;,O2&#39;,A

C1&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: C1'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 13
chem comp atom.pdbx stereo config: R
chem comp atom.type symbol: C
referenced by chem comp bond: C1&#39;,H1&#39;,A
referenced by chem comp bond: C2&#39;,C1&#39;,A
referenced by chem comp bond: O4&#39;,C1&#39;,A
referenced by chem comp bond: C1&#39;,N9,A

N9,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: N9
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: Y
chem comp atom.pdbx ordinal: 14
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: N
referenced by chem comp bond: N9,C4,A
referenced by chem comp bond: C1&#39;,N9,A
referenced by chem comp bond: N9,C8,A

C8,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: C8
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: Y
chem comp atom.pdbx ordinal: 15
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: C
referenced by chem comp bond: C8,H8,A
referenced by chem comp bond: N9,C8,A
referenced by chem comp bond: C8,N7,A

N7,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: N7
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: Y
chem comp atom.pdbx ordinal: 16
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: N
referenced by chem comp bond: N7,C5,A
referenced by chem comp bond: C8,N7,A

C5,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: C5
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: Y
chem comp atom.pdbx ordinal: 17
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: C
referenced by chem comp bond: C5,C4,A
referenced by chem comp bond: N7,C5,A
referenced by chem comp bond: C5,C6,A

C6,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: C6
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: Y
chem comp atom.pdbx ordinal: 18
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: C
referenced by chem comp bond: C6,N1,A
referenced by chem comp bond: C5,C6,A
referenced by chem comp bond: C6,N6,A

N6,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: N6
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 19
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: N
referenced by chem comp bond: N6,H62,A
referenced by chem comp bond: C6,N6,A
referenced by chem comp bond: N6,H61,A

N1,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: N1
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: Y
chem comp atom.pdbx ordinal: 20
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: N
referenced by chem comp bond: N1,C2,A
referenced by chem comp bond: C6,N1,A

C2,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: C2
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: Y
chem comp atom.pdbx ordinal: 21
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: C
referenced by chem comp bond: C2,H2,A
referenced by chem comp bond: N1,C2,A
referenced by chem comp bond: C2,N3,A

N3,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: N3
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: Y
chem comp atom.pdbx ordinal: 22
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: N
referenced by chem comp bond: N3,C4,A
referenced by chem comp bond: C2,N3,A

C4,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: C4
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: Y
chem comp atom.pdbx ordinal: 23
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: C
referenced by chem comp bond: N3,C4,A
referenced by chem comp bond: N9,C4,A
referenced by chem comp bond: C5,C4,A

HOP3,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: HOP3
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 24
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: OP3,HOP3,A

HOP2,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: HOP2
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 25
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: OP2,HOP2,A

H5&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: H5'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 26
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: C5&#39;,H5&#39;,A

H5&#39;&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: H5''
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 27
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: C5&#39;,H5&#39;&#39;,A

H4&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: H4'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 28
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: C4&#39;,H4&#39;,A

H3&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: H3'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 29
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: C3&#39;,H3&#39;,A

HO3&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: HO3'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 30
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: O3&#39;,HO3&#39;,A

H2&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: H2'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 31
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: C2&#39;,H2&#39;,A

HO2&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: HO2'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 32
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: O2&#39;,HO2&#39;,A

H1&#39;,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: H1'
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 33
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: C1&#39;,H1&#39;,A

H8,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: H8
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 34
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: C8,H8,A

H61,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: H61
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 35
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: N6,H61,A

H62,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: H62
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 36
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: N6,H62,A

H2,A
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp atom.atom id: H2
chem comp atom.comp id: A
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 37
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: C2,H2,A

O,HOH
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: HOH
chem comp atom.atom id: O
chem comp atom.comp id: HOH
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 38
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: O
referenced by chem comp bond: O,H2,HOH
referenced by chem comp bond: O,H1,HOH

H1,HOH
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: HOH
chem comp atom.atom id: H1
chem comp atom.comp id: HOH
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 39
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: O,H1,HOH

H2,HOH
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: HOH
chem comp atom.atom id: H2
chem comp atom.comp id: HOH
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 40
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: O,H2,HOH

N,NH4
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: NH4
chem comp atom.atom id: N
chem comp atom.comp id: NH4
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 41
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: N
referenced by chem comp bond: N,HN4,NH4
referenced by chem comp bond: N,HN1,NH4
referenced by chem comp bond: N,HN2,NH4
referenced by chem comp bond: N,HN3,NH4

HN1,NH4
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: NH4
chem comp atom.atom id: HN1
chem comp atom.comp id: NH4
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 42
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: N,HN1,NH4

HN2,NH4
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: NH4
chem comp atom.atom id: HN2
chem comp atom.comp id: NH4
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 43
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: N,HN2,NH4

HN3,NH4
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: NH4
chem comp atom.atom id: HN3
chem comp atom.comp id: NH4
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 44
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: N,HN3,NH4

HN4,NH4
type: chem comp atom
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: NH4
chem comp atom.atom id: HN4
chem comp atom.comp id: NH4
chem comp atom.pdbx aromatic flag: N
chem comp atom.pdbx ordinal: 45
chem comp atom.pdbx stereo config: N
chem comp atom.type symbol: H
referenced by chem comp bond: N,HN4,NH4

OP3,P,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: OP3,A
reference to chem comp atom: P,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: OP3
chem comp bond.atom id 2: P
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 1
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

OP3,HOP3,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: OP3,A
reference to chem comp atom: HOP3,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: OP3
chem comp bond.atom id 2: HOP3
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 2
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

P,OP1,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: P,A
reference to chem comp atom: OP1,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: P
chem comp bond.atom id 2: OP1
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 3
chem comp bond.pdbx stereo config: N
chem comp bond.value order: doub

P,OP2,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: P,A
reference to chem comp atom: OP2,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: P
chem comp bond.atom id 2: OP2
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 4
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

P,O5&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: P,A
reference to chem comp atom: O5&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: P
chem comp bond.atom id 2: O5'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 5
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

OP2,HOP2,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: OP2,A
reference to chem comp atom: HOP2,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: OP2
chem comp bond.atom id 2: HOP2
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 6
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

O5&#39;,C5&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: O5&#39;,A
reference to chem comp atom: C5&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: O5'
chem comp bond.atom id 2: C5'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 7
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C5&#39;,C4&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C5&#39;,A
reference to chem comp atom: C4&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C5'
chem comp bond.atom id 2: C4'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 8
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C5&#39;,H5&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C5&#39;,A
reference to chem comp atom: H5&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C5'
chem comp bond.atom id 2: H5'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 9
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C5&#39;,H5&#39;&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C5&#39;,A
reference to chem comp atom: H5&#39;&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C5'
chem comp bond.atom id 2: H5''
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 10
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C4&#39;,O4&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C4&#39;,A
reference to chem comp atom: O4&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C4'
chem comp bond.atom id 2: O4'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 11
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C4&#39;,C3&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C4&#39;,A
reference to chem comp atom: C3&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C4'
chem comp bond.atom id 2: C3'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 12
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C4&#39;,H4&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C4&#39;,A
reference to chem comp atom: H4&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C4'
chem comp bond.atom id 2: H4'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 13
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

O4&#39;,C1&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: O4&#39;,A
reference to chem comp atom: C1&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: O4'
chem comp bond.atom id 2: C1'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 14
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C3&#39;,O3&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C3&#39;,A
reference to chem comp atom: O3&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C3'
chem comp bond.atom id 2: O3'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 15
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C3&#39;,C2&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C3&#39;,A
reference to chem comp atom: C2&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C3'
chem comp bond.atom id 2: C2'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 16
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C3&#39;,H3&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C3&#39;,A
reference to chem comp atom: H3&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C3'
chem comp bond.atom id 2: H3'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 17
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

O3&#39;,HO3&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: O3&#39;,A
reference to chem comp atom: HO3&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: O3'
chem comp bond.atom id 2: HO3'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 18
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C2&#39;,O2&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C2&#39;,A
reference to chem comp atom: O2&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C2'
chem comp bond.atom id 2: O2'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 19
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C2&#39;,C1&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C2&#39;,A
reference to chem comp atom: C1&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C2'
chem comp bond.atom id 2: C1'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 20
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C2&#39;,H2&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C2&#39;,A
reference to chem comp atom: H2&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C2'
chem comp bond.atom id 2: H2'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 21
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

O2&#39;,HO2&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: O2&#39;,A
reference to chem comp atom: HO2&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: O2'
chem comp bond.atom id 2: HO2'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 22
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C1&#39;,N9,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C1&#39;,A
reference to chem comp atom: N9,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C1'
chem comp bond.atom id 2: N9
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 23
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C1&#39;,H1&#39;,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C1&#39;,A
reference to chem comp atom: H1&#39;,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C1'
chem comp bond.atom id 2: H1'
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 24
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

N9,C8,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: N9,A
reference to chem comp atom: C8,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: N9
chem comp bond.atom id 2: C8
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: Y
chem comp bond.pdbx ordinal: 25
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

N9,C4,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: N9,A
reference to chem comp atom: C4,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: N9
chem comp bond.atom id 2: C4
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: Y
chem comp bond.pdbx ordinal: 26
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C8,N7,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C8,A
reference to chem comp atom: N7,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C8
chem comp bond.atom id 2: N7
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: Y
chem comp bond.pdbx ordinal: 27
chem comp bond.pdbx stereo config: N
chem comp bond.value order: doub

C8,H8,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C8,A
reference to chem comp atom: H8,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C8
chem comp bond.atom id 2: H8
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 28
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

N7,C5,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: N7,A
reference to chem comp atom: C5,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: N7
chem comp bond.atom id 2: C5
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: Y
chem comp bond.pdbx ordinal: 29
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C5,C6,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C5,A
reference to chem comp atom: C6,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C5
chem comp bond.atom id 2: C6
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: Y
chem comp bond.pdbx ordinal: 30
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C5,C4,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C5,A
reference to chem comp atom: C4,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C5
chem comp bond.atom id 2: C4
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: Y
chem comp bond.pdbx ordinal: 31
chem comp bond.pdbx stereo config: N
chem comp bond.value order: doub

C6,N6,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C6,A
reference to chem comp atom: N6,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C6
chem comp bond.atom id 2: N6
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 32
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C6,N1,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C6,A
reference to chem comp atom: N1,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C6
chem comp bond.atom id 2: N1
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: Y
chem comp bond.pdbx ordinal: 33
chem comp bond.pdbx stereo config: N
chem comp bond.value order: doub

N6,H61,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: N6,A
reference to chem comp atom: H61,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: N6
chem comp bond.atom id 2: H61
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 34
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

N6,H62,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: N6,A
reference to chem comp atom: H62,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: N6
chem comp bond.atom id 2: H62
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 35
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

N1,C2,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: N1,A
reference to chem comp atom: C2,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: N1
chem comp bond.atom id 2: C2
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: Y
chem comp bond.pdbx ordinal: 36
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

C2,N3,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C2,A
reference to chem comp atom: N3,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C2
chem comp bond.atom id 2: N3
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: Y
chem comp bond.pdbx ordinal: 37
chem comp bond.pdbx stereo config: N
chem comp bond.value order: doub

C2,H2,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: C2,A
reference to chem comp atom: H2,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: C2
chem comp bond.atom id 2: H2
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 38
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

N3,C4,A
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: N3,A
reference to chem comp atom: C4,A
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
chem comp bond.atom id 1: N3
chem comp bond.atom id 2: C4
chem comp bond.comp id: A
chem comp bond.pdbx aromatic flag: Y
chem comp bond.pdbx ordinal: 39
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

O,H1,HOH
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: O,HOH
reference to chem comp atom: H1,HOH
reference to chem comp: HOH
chem comp bond.atom id 1: O
chem comp bond.atom id 2: H1
chem comp bond.comp id: HOH
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 40
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

O,H2,HOH
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: O,HOH
reference to chem comp atom: H2,HOH
reference to chem comp: HOH
chem comp bond.atom id 1: O
chem comp bond.atom id 2: H2
chem comp bond.comp id: HOH
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 41
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

N,HN1,NH4
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: N,NH4
reference to chem comp atom: HN1,NH4
reference to chem comp: NH4
chem comp bond.atom id 1: N
chem comp bond.atom id 2: HN1
chem comp bond.comp id: NH4
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 42
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

N,HN2,NH4
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: N,NH4
reference to chem comp atom: HN2,NH4
reference to chem comp: NH4
chem comp bond.atom id 1: N
chem comp bond.atom id 2: HN2
chem comp bond.comp id: NH4
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 43
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

N,HN3,NH4
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: N,NH4
reference to chem comp atom: HN3,NH4
reference to chem comp: NH4
chem comp bond.atom id 1: N
chem comp bond.atom id 2: HN3
chem comp bond.comp id: NH4
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 44
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

N,HN4,NH4
type: chem comp bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp atom: N,NH4
reference to chem comp atom: HN4,NH4
reference to chem comp: NH4
chem comp bond.atom id 1: N
chem comp bond.atom id 2: HN4
chem comp bond.comp id: NH4
chem comp bond.pdbx aromatic flag: N
chem comp bond.pdbx ordinal: 45
chem comp bond.pdbx stereo config: N
chem comp bond.value order: sing

primary
type: citation
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
citation.id: primary
citation.country: UK
citation.journal abbrev: Nucleic Acids Res.
citation.journal id ASTM: NARHAD
citation.journal id CSD: 0389
citation.journal id ISSN: 1362-4962
citation.journal volume: 44
citation.page first: 8417
citation.page last: 8424
citation.pdbx database id DOI: 10.1093/nar/gkw526
citation.pdbx database id pub med: 27288442
citation.title: Crystal structure of a poly(rA) staggered zipper at acidic pH: evidence that adenine N1 protonation mediates parallel double helix formation.
citation.year: 2016
link to doi: doi:10.1093/nar/gkw526
link to pubmed: pubmed:27288442
references: pubmed:27288442
referenced by citation author: primary,Maquat, L.E.,4
referenced by citation author: primary,Gleghorn, M.L.,1
referenced by citation author: primary,Zhao, J.,2
referenced by citation author: primary,Turner, D.H.,3

primary,Gleghorn, M.L.,1
type: citation author
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to citation: primary
citation author.citation id: primary
citation author.name: Gleghorn, M.L.
citation author.ordinal: 1

primary,Zhao, J.,2
type: citation author
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to citation: primary
citation author.citation id: primary
citation author.name: Zhao, J.
citation author.ordinal: 2

primary,Turner, D.H.,3
type: citation author
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to citation: primary
citation author.citation id: primary
citation author.name: Turner, D.H.
citation author.ordinal: 3

primary,Maquat, L.E.,4
type: citation author
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to citation: primary
citation author.citation id: primary
citation author.name: Maquat, L.E.
citation author.ordinal: 4

5K8H,PDB
type: database 2
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
database 2.database code: 5K8H
database 2.database id: PDB
database 2.pdbx DOI: 10.2210/pdb5k8h/pdb
database 2.pdbx database accession: pdb_00005k8h

D 1000221863,WWPDB
type: database 2
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
database 2.database code: D_1000221863
database 2.database id: WWPDB

http://rdf.wwpdb.org/pdb/5K8H/diffrn/1
type: diffrn
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to exptl crystal: http://rdf.wwpdb.org/pdb/5K8H/exptl_crystal/1
diffrn.id: 1
diffrn.ambient temp: 100
diffrn.crystal id: 1
referenced by diffrn detector: http://rdf.wwpdb.org/pdb/5K8H/diffrn_detector/1
referenced by diffrn radiation: http://rdf.wwpdb.org/pdb/5K8H/diffrn_radiation/1
referenced by diffrn source: http://rdf.wwpdb.org/pdb/5K8H/diffrn_source/1

http://rdf.wwpdb.org/pdb/5K8H/exptl_crystal/1
referenced by diffrn: http://rdf.wwpdb.org/pdb/5K8H/diffrn/1
type: exptl crystal
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
exptl crystal.id: 1
exptl crystal.density matthews: 1.33
exptl crystal.density percent sol: 8
referenced by exptl crystal grow: http://rdf.wwpdb.org/pdb/5K8H/exptl_crystal_grow/1

http://rdf.wwpdb.org/pdb/5K8H/diffrn_detector/1
type: diffrn detector
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to diffrn: http://rdf.wwpdb.org/pdb/5K8H/diffrn/1
diffrn detector.diffrn id: 1
diffrn detector.detector: PIXEL
diffrn detector.pdbx collection date: 2015-03-22
diffrn detector.type: DECTRIS PILATUS 6M

http://rdf.wwpdb.org/pdb/5K8H/diffrn_radiation/1
type: diffrn radiation
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to diffrn: http://rdf.wwpdb.org/pdb/5K8H/diffrn/1
diffrn radiation.diffrn id: 1
diffrn radiation.pdbx diffrn protocol: SINGLE WAVELENGTH
diffrn radiation.pdbx monochromatic or laue m l: M
diffrn radiation.pdbx scattering type: x-ray
diffrn radiation.wavelength id: 1

http://rdf.wwpdb.org/pdb/5K8H/diffrn_radiation_wavelength/1
type: diffrn radiation wavelength
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
diffrn radiation wavelength.id: 1
diffrn radiation wavelength.wavelength: 0.9553
diffrn radiation wavelength.wt: 1

http://rdf.wwpdb.org/pdb/5K8H/diffrn_source/1
type: diffrn source
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to diffrn: http://rdf.wwpdb.org/pdb/5K8H/diffrn/1
diffrn source.diffrn id: 1
diffrn source.pdbx synchrotron beamline: BL12-2
diffrn source.pdbx synchrotron site: SSRL
diffrn source.pdbx wavelength list: 0.95530
diffrn source.source: SYNCHROTRON
diffrn source.type: SSRL BEAMLINE BL12-2

http://rdf.wwpdb.org/pdb/5K8H/entity/1
type: entity
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
entity.id: 1
entity.formula weight: 2259.483
entity.pdbx description: RNA 7-mer
entity.pdbx number of molecules: 1
entity.src method: syn
entity.type: polymer
referenced by entity poly: http://rdf.wwpdb.org/pdb/5K8H/entity_poly/1
referenced by struct asym: http://rdf.wwpdb.org/pdb/5K8H/struct_asym/A
referenced by struct ref: http://rdf.wwpdb.org/pdb/5K8H/struct_ref/1
referenced by pdbx entity src syn: 1,1

http://rdf.wwpdb.org/pdb/5K8H/entity/2
type: entity
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
entity.id: 2
entity.formula weight: 18.038
entity.pdbx description: AMMONIUM ION
entity.pdbx number of molecules: 1
entity.src method: syn
entity.type: non-polymer
referenced by struct asym: http://rdf.wwpdb.org/pdb/5K8H/struct_asym/B
referenced by pdbx entity nonpoly: http://rdf.wwpdb.org/pdb/5K8H/pdbx_entity_nonpoly/2

http://rdf.wwpdb.org/pdb/5K8H/entity/3
type: entity
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
entity.id: 3
entity.formula weight: 18.015
entity.pdbx description: water
entity.pdbx number of molecules: 8
entity.src method: nat
entity.type: water
referenced by struct asym: http://rdf.wwpdb.org/pdb/5K8H/struct_asym/C
referenced by pdbx entity nonpoly: http://rdf.wwpdb.org/pdb/5K8H/pdbx_entity_nonpoly/3

http://rdf.wwpdb.org/pdb/5K8H/entity_poly/1
type: entity poly
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entity: http://rdf.wwpdb.org/pdb/5K8H/entity/1
entity poly.entity id: 1
entity poly.nstd linkage: no
entity poly.nstd monomer: no
entity poly.pdbx seq one letter code: AAAAAAA
entity poly.pdbx seq one letter code can: AAAAAAA
entity poly.pdbx strand id: A
entity poly.type: polyribonucleotide
referenced by entity poly seq: 1,A,7
referenced by entity poly seq: 1,A,1
referenced by entity poly seq: 1,A,2
referenced by entity poly seq: 1,A,3
referenced by entity poly seq: 1,A,4
referenced by entity poly seq: 1,A,5
referenced by entity poly seq: 1,A,6

1,A,1
type: entity poly seq
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
reference to entity poly: http://rdf.wwpdb.org/pdb/5K8H/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: A
entity poly seq.num: 1
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: A,1,A,1

1,A,2
type: entity poly seq
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
reference to entity poly: http://rdf.wwpdb.org/pdb/5K8H/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: A
entity poly seq.num: 2
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: A,1,A,2

1,A,3
type: entity poly seq
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
reference to entity poly: http://rdf.wwpdb.org/pdb/5K8H/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: A
entity poly seq.num: 3
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: A,1,A,3

1,A,4
type: entity poly seq
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
reference to entity poly: http://rdf.wwpdb.org/pdb/5K8H/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: A
entity poly seq.num: 4
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: A,1,A,4

1,A,5
type: entity poly seq
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
reference to entity poly: http://rdf.wwpdb.org/pdb/5K8H/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: A
entity poly seq.num: 5
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: A,1,A,5

1,A,6
type: entity poly seq
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
reference to entity poly: http://rdf.wwpdb.org/pdb/5K8H/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: A
entity poly seq.num: 6
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: A,1,A,6

1,A,7
type: entity poly seq
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
reference to entity poly: http://rdf.wwpdb.org/pdb/5K8H/entity_poly/1
entity poly seq.entity id: 1
entity poly seq.mon id: A
entity poly seq.num: 7
entity poly seq.hetero: n
referenced by pdbx poly seq scheme: A,1,A,7

5K8H,X-RAY DIFFRACTION
type: exptl
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entry: 5K8H
exptl.entry id: 5K8H
exptl.method: X-RAY DIFFRACTION
exptl.crystals number: 1

http://rdf.wwpdb.org/pdb/5K8H/exptl_crystal_grow/1
type: exptl crystal grow
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to exptl crystal: http://rdf.wwpdb.org/pdb/5K8H/exptl_crystal/1
exptl crystal grow.crystal id: 1
exptl crystal grow.method: VAPOR DIFFUSION, HANGING DROP
exptl crystal grow.p h: 3.5
exptl crystal grow.pdbx details: rA7 dissolved in water to 10 mM and was diluted 1/10 v/v in 0.75% PEG 1000. One uL of this was mixed with 1 uL of the following reservoir solution: (0.24 M ammonium sulfate and 0.06 M citric acid pH 3.5) to generate a hanging drop over 1 mL of this reservoir solution.
exptl crystal grow.temp: 293.15

5K8H,double helix
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reference to entry: 5K8H
ndb struct conf na.entry id: 5K8H
ndb struct conf na.feature: double helix

A,A,2,1 555,A,A,2,2 835,1
type: ndb struct na base pair
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ndb struct na base pair.i label asym id: A
ndb struct na base pair.i label comp id: A
ndb struct na base pair.i label seq id: 2
ndb struct na base pair.i symmetry: 1_555
ndb struct na base pair.j label asym id: A
ndb struct na base pair.j label comp id: A
ndb struct na base pair.j label seq id: 2
ndb struct na base pair.j symmetry: 2_835
ndb struct na base pair.model number: 1
ndb struct na base pair.buckle: -3.36
ndb struct na base pair.hbond type 12: 8
ndb struct na base pair.hbond type 28: 2
ndb struct na base pair.i auth asym id: A
ndb struct na base pair.i auth seq id: 1
ndb struct na base pair.j auth asym id: A
ndb struct na base pair.j auth seq id: 1
ndb struct na base pair.opening: 180
ndb struct na base pair.pair name: A_A1:A1_A
ndb struct na base pair.pair number: 1
ndb struct na base pair.propeller: -10.764
ndb struct na base pair.shear: 6.05
ndb struct na base pair.stagger: 0
ndb struct na base pair.stretch: -5.029

A,A,3,1 555,A,A,3,2 835,1
type: ndb struct na base pair
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ndb struct na base pair.j label asym id: A
ndb struct na base pair.j label comp id: A
ndb struct na base pair.j label seq id: 3
ndb struct na base pair.j symmetry: 2_835
ndb struct na base pair.model number: 1
ndb struct na base pair.buckle: -3.42
ndb struct na base pair.hbond type 12: 8
ndb struct na base pair.hbond type 28: 2
ndb struct na base pair.i auth asym id: A
ndb struct na base pair.i auth seq id: 2
ndb struct na base pair.j auth asym id: A
ndb struct na base pair.j auth seq id: 2
ndb struct na base pair.opening: 180
ndb struct na base pair.pair name: A_A2:A2_A
ndb struct na base pair.pair number: 2
ndb struct na base pair.propeller: -12.013
ndb struct na base pair.shear: 6.078
ndb struct na base pair.stagger: 0
ndb struct na base pair.stretch: -5.01

A,A,A,A,2,3,1 555,1 555,A,A,A,A,2,3,2 835,2 835,1
type: ndb struct na base pair step
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ndb struct na base pair step.i label asym id 1: A
ndb struct na base pair step.i label asym id 2: A
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ndb struct na base pair step.i label comp id 2: A
ndb struct na base pair step.i label seq id 1: 2
ndb struct na base pair step.i label seq id 2: 3
ndb struct na base pair step.i symmetry 1: 1_555
ndb struct na base pair step.i symmetry 2: 1_555
ndb struct na base pair step.j label asym id 1: A
ndb struct na base pair step.j label asym id 2: A
ndb struct na base pair step.j label comp id 1: A
ndb struct na base pair step.j label comp id 2: A
ndb struct na base pair step.j label seq id 1: 2
ndb struct na base pair step.j label seq id 2: 3
ndb struct na base pair step.j symmetry 1: 2_835
ndb struct na base pair step.j symmetry 2: 2_835
ndb struct na base pair step.model number: 1
ndb struct na base pair step.helical rise: 3.748
ndb struct na base pair step.helical twist: 47.599
ndb struct na base pair step.i auth asym id 1: A
ndb struct na base pair step.i auth asym id 2: A
ndb struct na base pair step.i auth seq id 1: 1
ndb struct na base pair step.i auth seq id 2: 2
ndb struct na base pair step.inclination: 0
ndb struct na base pair step.j auth asym id 1: A
ndb struct na base pair step.j auth asym id 2: A
ndb struct na base pair step.j auth seq id 1: 1
ndb struct na base pair step.j auth seq id 2: 2
ndb struct na base pair step.rise: 3.748
ndb struct na base pair step.roll: 0
ndb struct na base pair step.shift: 0
ndb struct na base pair step.slide: 0
ndb struct na base pair step.step name: AA_A1A2:A2A1_AA
ndb struct na base pair step.step number: 1
ndb struct na base pair step.tilt: 0
ndb struct na base pair step.tip: 0
ndb struct na base pair step.twist: 47.599
ndb struct na base pair step.x displacement: 0
ndb struct na base pair step.y displacement: 0

Structure model,1,6
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Structure model,6
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Structure model,2,6
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Structure model,3,6
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Structure model,7
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Structure model,5,8
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Structure model,8
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Structure model,6,8
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Structure model,7,8
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Structure model,8,8
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Structure model,9,8
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Structure model,1,1
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Structure model,1
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Structure model,1,2
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Structure model,2
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Structure model,2,3
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Structure model,3
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Structure model,3,4
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Structure model,4
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Structure model,4,5
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Structure model,5
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Structure model,5,6
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Structure model,6,6
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Structure model,7,6
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Structure model,8,7
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Structure model,9,8
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Structure model,10,8
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Structure model,11,8
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Structure model,1,6
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Structure model,2,6
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Structure model,3,7
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Structure model,4,8
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Structure model,5,8
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http://rdf.wwpdb.org/pdb/5K8H/pdbx_audit_support/1
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pdbx audit support.ordinal: 1
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http://rdf.wwpdb.org/pdb/5K8H/pdbx_audit_support/2
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pdbx audit support.ordinal: 2
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pdbx audit support.grant number: R01 GM22939

http://rdf.wwpdb.org/pdb/5K8H/pdbx_audit_support/3
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pdbx audit support.ordinal: 3
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pdbx audit support.grant number: T32 CA09363

5K8H
type: pdbx database status
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reference to entry: 5K8H
pdbx database status.entry id: 5K8H
pdbx database status.sg entry: N
pdbx database status.deposit site: RCSB
pdbx database status.pdb format compatible: Y
pdbx database status.process site: RCSB
pdbx database status.recvd initial deposition date: 2016-05-30
pdbx database status.status code: REL
pdbx database status.status code sf: REL

http://rdf.wwpdb.org/pdb/5K8H/pdbx_entity_nonpoly/2
type: pdbx entity nonpoly
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reference to entity: http://rdf.wwpdb.org/pdb/5K8H/entity/2
pdbx entity nonpoly.entity id: 2
pdbx entity nonpoly.comp id: NH4
pdbx entity nonpoly.name: AMMONIUM ION

http://rdf.wwpdb.org/pdb/5K8H/pdbx_entity_nonpoly/3
type: pdbx entity nonpoly
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reference to entity: http://rdf.wwpdb.org/pdb/5K8H/entity/3
pdbx entity nonpoly.entity id: 3
pdbx entity nonpoly.comp id: HOH
pdbx entity nonpoly.name: water

1,1
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pdbx entity src syn.entity id: 1
pdbx entity src syn.pdbx src id: 1
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pdbx entity src syn.organism scientific: synthetic construct
pdbx entity src syn.pdbx alt source flag: sample
pdbx entity src syn.pdbx beg seq num: 1
pdbx entity src syn.pdbx end seq num: 7

http://rdf.wwpdb.org/pdb/5K8H/pdbx_initial_refinement_model/1
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pdbx initial refinement model.id: 1
pdbx initial refinement model.accession code: 4JRD
pdbx initial refinement model.details: rA2 section of the 4JRD
pdbx initial refinement model.source name: PDB
pdbx initial refinement model.type: experimental model

B,1
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pdbx nonpoly scheme.asym id: B
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pdbx nonpoly scheme.pdb mon id: NH4
pdbx nonpoly scheme.pdb seq num: 101
pdbx nonpoly scheme.pdb strand id: A

C,1
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pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 201
pdbx nonpoly scheme.pdb strand id: A

C,2
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pdbx nonpoly scheme.pdb strand id: A

C,3
type: pdbx nonpoly scheme
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 3
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 4
pdbx nonpoly scheme.entity id: 3
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 203
pdbx nonpoly scheme.pdb strand id: A

C,4
type: pdbx nonpoly scheme
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 4
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 11
pdbx nonpoly scheme.entity id: 3
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 204
pdbx nonpoly scheme.pdb strand id: A

C,5
type: pdbx nonpoly scheme
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 5
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 9
pdbx nonpoly scheme.entity id: 3
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 205
pdbx nonpoly scheme.pdb strand id: A

C,6
type: pdbx nonpoly scheme
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 6
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 5
pdbx nonpoly scheme.entity id: 3
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 206
pdbx nonpoly scheme.pdb strand id: A

C,7
type: pdbx nonpoly scheme
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 7
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 1
pdbx nonpoly scheme.entity id: 3
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 207
pdbx nonpoly scheme.pdb strand id: A

C,8
type: pdbx nonpoly scheme
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx nonpoly scheme.asym id: C
pdbx nonpoly scheme.ndb seq num: 8
pdbx nonpoly scheme.auth mon id: HOH
pdbx nonpoly scheme.auth seq num: 2
pdbx nonpoly scheme.entity id: 3
pdbx nonpoly scheme.mon id: HOH
pdbx nonpoly scheme.pdb mon id: HOH
pdbx nonpoly scheme.pdb seq num: 208
pdbx nonpoly scheme.pdb strand id: A

A,1,A,1
type: pdbx poly seq scheme
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entity poly seq: 1,A,1
reference to struct asym: http://rdf.wwpdb.org/pdb/5K8H/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: A
pdbx poly seq scheme.seq id: 1
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 1
pdbx poly seq scheme.pdb seq num: 0
pdbx poly seq scheme.pdb strand id: A

http://rdf.wwpdb.org/pdb/5K8H/struct_asym/A
referenced by pdbx poly seq scheme: A,1,A,1
referenced by pdbx poly seq scheme: A,1,A,2
referenced by pdbx poly seq scheme: A,1,A,3
referenced by pdbx poly seq scheme: A,1,A,4
referenced by pdbx poly seq scheme: A,1,A,5
referenced by pdbx poly seq scheme: A,1,A,6
referenced by pdbx poly seq scheme: A,1,A,7
type: struct asym
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entity: http://rdf.wwpdb.org/pdb/5K8H/entity/1
struct asym.id: A
struct asym.entity id: 1
struct asym.pdbx blank PDB chainid flag: N
struct asym.pdbx modified: N

A,1,A,2
type: pdbx poly seq scheme
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entity poly seq: 1,A,2
reference to struct asym: http://rdf.wwpdb.org/pdb/5K8H/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: A
pdbx poly seq scheme.seq id: 2
pdbx poly seq scheme.auth mon id: A
pdbx poly seq scheme.auth seq num: 1
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 2
pdbx poly seq scheme.pdb mon id: A
pdbx poly seq scheme.pdb seq num: 1
pdbx poly seq scheme.pdb strand id: A

A,1,A,3
type: pdbx poly seq scheme
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entity poly seq: 1,A,3
reference to struct asym: http://rdf.wwpdb.org/pdb/5K8H/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: A
pdbx poly seq scheme.seq id: 3
pdbx poly seq scheme.auth mon id: A
pdbx poly seq scheme.auth seq num: 2
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 3
pdbx poly seq scheme.pdb mon id: A
pdbx poly seq scheme.pdb seq num: 2
pdbx poly seq scheme.pdb strand id: A

A,1,A,4
type: pdbx poly seq scheme
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entity poly seq: 1,A,4
reference to struct asym: http://rdf.wwpdb.org/pdb/5K8H/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: A
pdbx poly seq scheme.seq id: 4
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 4
pdbx poly seq scheme.pdb seq num: 3
pdbx poly seq scheme.pdb strand id: A

A,1,A,5
type: pdbx poly seq scheme
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entity poly seq: 1,A,5
reference to struct asym: http://rdf.wwpdb.org/pdb/5K8H/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: A
pdbx poly seq scheme.seq id: 5
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 5
pdbx poly seq scheme.pdb seq num: 4
pdbx poly seq scheme.pdb strand id: A

A,1,A,6
type: pdbx poly seq scheme
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entity poly seq: 1,A,6
reference to struct asym: http://rdf.wwpdb.org/pdb/5K8H/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: A
pdbx poly seq scheme.seq id: 6
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 6
pdbx poly seq scheme.pdb seq num: 5
pdbx poly seq scheme.pdb strand id: A

A,1,A,7
type: pdbx poly seq scheme
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entity poly seq: 1,A,7
reference to struct asym: http://rdf.wwpdb.org/pdb/5K8H/struct_asym/A
pdbx poly seq scheme.asym id: A
pdbx poly seq scheme.entity id: 1
pdbx poly seq scheme.mon id: A
pdbx poly seq scheme.seq id: 7
pdbx poly seq scheme.hetero: n
pdbx poly seq scheme.ndb seq num: 7
pdbx poly seq scheme.pdb seq num: 6
pdbx poly seq scheme.pdb strand id: A

http://rdf.wwpdb.org/pdb/5K8H/pdbx_struct_assembly/1
type: pdbx struct assembly
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx struct assembly.id: 1
pdbx struct assembly.details: author_defined_assembly
pdbx struct assembly.oligomeric count: 2
pdbx struct assembly.oligomeric details: dimeric
referenced by pdbx struct assembly gen: 1,A,B,C,2
referenced by pdbx struct assembly gen: 1,A,B,C,1

1,A,B,C,1
type: pdbx struct assembly gen
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to pdbx struct assembly: http://rdf.wwpdb.org/pdb/5K8H/pdbx_struct_assembly/1
pdbx struct assembly gen.assembly id: 1
pdbx struct assembly gen.asym id list: A,B,C
pdbx struct assembly gen.oper expression: 1

1,A,B,C,2
type: pdbx struct assembly gen
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to pdbx struct assembly: http://rdf.wwpdb.org/pdb/5K8H/pdbx_struct_assembly/1
pdbx struct assembly gen.assembly id: 1
pdbx struct assembly gen.asym id list: A,B,C
pdbx struct assembly gen.oper expression: 2

http://rdf.wwpdb.org/pdb/5K8H/pdbx_struct_oper_list/1
type: pdbx struct oper list
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx struct oper list.id: 1
pdbx struct oper list.matrix11: 1
pdbx struct oper list.matrix12: 0
pdbx struct oper list.matrix13: 0
pdbx struct oper list.matrix21: 0
pdbx struct oper list.matrix22: 1
pdbx struct oper list.matrix23: 0
pdbx struct oper list.matrix31: 0
pdbx struct oper list.matrix32: 0
pdbx struct oper list.matrix33: 1
pdbx struct oper list.name: 1_555
pdbx struct oper list.symmetry operation: x,y,z
pdbx struct oper list.type: identity operation
pdbx struct oper list.vector1: 0
pdbx struct oper list.vector2: 0
pdbx struct oper list.vector3: 0

http://rdf.wwpdb.org/pdb/5K8H/pdbx_struct_oper_list/2
type: pdbx struct oper list
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx struct oper list.id: 2
pdbx struct oper list.matrix11: -1
pdbx struct oper list.matrix12: 0
pdbx struct oper list.matrix13: 0
pdbx struct oper list.matrix21: 0
pdbx struct oper list.matrix22: -1
pdbx struct oper list.matrix23: 0
pdbx struct oper list.matrix31: 0
pdbx struct oper list.matrix32: 0
pdbx struct oper list.matrix33: 1
pdbx struct oper list.name: 2_835
pdbx struct oper list.symmetry operation: -x+3,-y-2,z
pdbx struct oper list.type: crystal symmetry operation
pdbx struct oper list.vector1: 63.759
pdbx struct oper list.vector2: -42.506
pdbx struct oper list.vector3: 0

http://rdf.wwpdb.org/pdb/5K8H/pdbx_unobs_or_zero_occ_residues/1
type: pdbx unobs or zero occ residues
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
pdbx unobs or zero occ residues.id: 1
pdbx unobs or zero occ residues.pdb model num: 1
pdbx unobs or zero occ residues.auth asym id: A
pdbx unobs or zero occ residues.auth comp id: A
pdbx unobs or zero occ residues.auth seq id: 0
pdbx unobs or zero occ residues.label asym id: A
pdbx unobs or zero occ residues.label comp id: A
pdbx unobs or zero occ residues.label seq id: 1
pdbx unobs or zero occ residues.occupancy flag: 1
pdbx unobs or zero occ residues.polymer flag: Y

http://rdf.wwpdb.org/pdb/5K8H/pdbx_unobs_or_zero_occ_residues/2
type: pdbx unobs or zero occ residues
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
pdbx unobs or zero occ residues.id: 2
pdbx unobs or zero occ residues.pdb model num: 1
pdbx unobs or zero occ residues.auth asym id: A
pdbx unobs or zero occ residues.auth comp id: A
pdbx unobs or zero occ residues.auth seq id: 3
pdbx unobs or zero occ residues.label asym id: A
pdbx unobs or zero occ residues.label comp id: A
pdbx unobs or zero occ residues.label seq id: 4
pdbx unobs or zero occ residues.occupancy flag: 1
pdbx unobs or zero occ residues.polymer flag: Y

http://rdf.wwpdb.org/pdb/5K8H/pdbx_unobs_or_zero_occ_residues/3
type: pdbx unobs or zero occ residues
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
pdbx unobs or zero occ residues.id: 3
pdbx unobs or zero occ residues.pdb model num: 1
pdbx unobs or zero occ residues.auth asym id: A
pdbx unobs or zero occ residues.auth comp id: A
pdbx unobs or zero occ residues.auth seq id: 4
pdbx unobs or zero occ residues.label asym id: A
pdbx unobs or zero occ residues.label comp id: A
pdbx unobs or zero occ residues.label seq id: 5
pdbx unobs or zero occ residues.occupancy flag: 1
pdbx unobs or zero occ residues.polymer flag: Y

http://rdf.wwpdb.org/pdb/5K8H/pdbx_unobs_or_zero_occ_residues/4
type: pdbx unobs or zero occ residues
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
pdbx unobs or zero occ residues.id: 4
pdbx unobs or zero occ residues.pdb model num: 1
pdbx unobs or zero occ residues.auth asym id: A
pdbx unobs or zero occ residues.auth comp id: A
pdbx unobs or zero occ residues.auth seq id: 5
pdbx unobs or zero occ residues.label asym id: A
pdbx unobs or zero occ residues.label comp id: A
pdbx unobs or zero occ residues.label seq id: 6
pdbx unobs or zero occ residues.occupancy flag: 1
pdbx unobs or zero occ residues.polymer flag: Y

http://rdf.wwpdb.org/pdb/5K8H/pdbx_unobs_or_zero_occ_residues/5
type: pdbx unobs or zero occ residues
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to chem comp: http://rdf.wwpdb.org/pdb/5K8H/chem_comp/A
pdbx unobs or zero occ residues.id: 5
pdbx unobs or zero occ residues.pdb model num: 1
pdbx unobs or zero occ residues.auth asym id: A
pdbx unobs or zero occ residues.auth comp id: A
pdbx unobs or zero occ residues.auth seq id: 6
pdbx unobs or zero occ residues.label asym id: A
pdbx unobs or zero occ residues.label comp id: A
pdbx unobs or zero occ residues.label seq id: 7
pdbx unobs or zero occ residues.occupancy flag: 1
pdbx unobs or zero occ residues.polymer flag: Y

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_angle/1
type: pdbx validate rmsd angle
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd angle.id: 1
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -9.42
pdbx validate rmsd angle.angle standard deviation: 1.1
pdbx validate rmsd angle.angle target value: 112
pdbx validate rmsd angle.angle value: 102.58
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: N9
pdbx validate rmsd angle.auth atom id 2: C1'
pdbx validate rmsd angle.auth atom id 3: C2'
pdbx validate rmsd angle.auth comp id 1: A
pdbx validate rmsd angle.auth comp id 2: A
pdbx validate rmsd angle.auth comp id 3: A
pdbx validate rmsd angle.auth seq id 1: 1
pdbx validate rmsd angle.auth seq id 2: 1
pdbx validate rmsd angle.auth seq id 3: 1
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_angle/2
type: pdbx validate rmsd angle
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd angle.id: 2
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: 8.17
pdbx validate rmsd angle.angle standard deviation: 0.6
pdbx validate rmsd angle.angle target value: 118.6
pdbx validate rmsd angle.angle value: 126.77
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: C6
pdbx validate rmsd angle.auth atom id 2: N1
pdbx validate rmsd angle.auth atom id 3: C2
pdbx validate rmsd angle.auth comp id 1: A
pdbx validate rmsd angle.auth comp id 2: A
pdbx validate rmsd angle.auth comp id 3: A
pdbx validate rmsd angle.auth seq id 1: 1
pdbx validate rmsd angle.auth seq id 2: 1
pdbx validate rmsd angle.auth seq id 3: 1
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_angle/3
type: pdbx validate rmsd angle
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd angle.id: 3
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -6.9
pdbx validate rmsd angle.angle standard deviation: 0.5
pdbx validate rmsd angle.angle target value: 129.3
pdbx validate rmsd angle.angle value: 122.4
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: N1
pdbx validate rmsd angle.auth atom id 2: C2
pdbx validate rmsd angle.auth atom id 3: N3
pdbx validate rmsd angle.auth comp id 1: A
pdbx validate rmsd angle.auth comp id 2: A
pdbx validate rmsd angle.auth comp id 3: A
pdbx validate rmsd angle.auth seq id 1: 1
pdbx validate rmsd angle.auth seq id 2: 1
pdbx validate rmsd angle.auth seq id 3: 1
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_angle/4
type: pdbx validate rmsd angle
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd angle.id: 4
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: 5.88
pdbx validate rmsd angle.angle standard deviation: 0.5
pdbx validate rmsd angle.angle target value: 117
pdbx validate rmsd angle.angle value: 122.88
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: C4
pdbx validate rmsd angle.auth atom id 2: C5
pdbx validate rmsd angle.auth atom id 3: C6
pdbx validate rmsd angle.auth comp id 1: A
pdbx validate rmsd angle.auth comp id 2: A
pdbx validate rmsd angle.auth comp id 3: A
pdbx validate rmsd angle.auth seq id 1: 1
pdbx validate rmsd angle.auth seq id 2: 1
pdbx validate rmsd angle.auth seq id 3: 1
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_angle/5
type: pdbx validate rmsd angle
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd angle.id: 5
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -10.85
pdbx validate rmsd angle.angle standard deviation: 0.5
pdbx validate rmsd angle.angle target value: 117.7
pdbx validate rmsd angle.angle value: 106.85
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: C5
pdbx validate rmsd angle.auth atom id 2: C6
pdbx validate rmsd angle.auth atom id 3: N1
pdbx validate rmsd angle.auth comp id 1: A
pdbx validate rmsd angle.auth comp id 2: A
pdbx validate rmsd angle.auth comp id 3: A
pdbx validate rmsd angle.auth seq id 1: 1
pdbx validate rmsd angle.auth seq id 2: 1
pdbx validate rmsd angle.auth seq id 3: 1
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_angle/6
type: pdbx validate rmsd angle
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd angle.id: 6
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -4.6
pdbx validate rmsd angle.angle standard deviation: 0.7
pdbx validate rmsd angle.angle target value: 132.3
pdbx validate rmsd angle.angle value: 127.7
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: C6
pdbx validate rmsd angle.auth atom id 2: C5
pdbx validate rmsd angle.auth atom id 3: N7
pdbx validate rmsd angle.auth comp id 1: A
pdbx validate rmsd angle.auth comp id 2: A
pdbx validate rmsd angle.auth comp id 3: A
pdbx validate rmsd angle.auth seq id 1: 1
pdbx validate rmsd angle.auth seq id 2: 1
pdbx validate rmsd angle.auth seq id 3: 1
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_angle/7
type: pdbx validate rmsd angle
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd angle.id: 7
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: 7.56
pdbx validate rmsd angle.angle standard deviation: 0.8
pdbx validate rmsd angle.angle target value: 123.7
pdbx validate rmsd angle.angle value: 131.26
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: C5
pdbx validate rmsd angle.auth atom id 2: C6
pdbx validate rmsd angle.auth atom id 3: N6
pdbx validate rmsd angle.auth comp id 1: A
pdbx validate rmsd angle.auth comp id 2: A
pdbx validate rmsd angle.auth comp id 3: A
pdbx validate rmsd angle.auth seq id 1: 1
pdbx validate rmsd angle.auth seq id 2: 1
pdbx validate rmsd angle.auth seq id 3: 1
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_angle/8
type: pdbx validate rmsd angle
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd angle.id: 8
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -3.07
pdbx validate rmsd angle.angle standard deviation: 0.5
pdbx validate rmsd angle.angle target value: 113.8
pdbx validate rmsd angle.angle value: 110.73
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: N7
pdbx validate rmsd angle.auth atom id 2: C8
pdbx validate rmsd angle.auth atom id 3: N9
pdbx validate rmsd angle.auth comp id 1: A
pdbx validate rmsd angle.auth comp id 2: A
pdbx validate rmsd angle.auth comp id 3: A
pdbx validate rmsd angle.auth seq id 1: 2
pdbx validate rmsd angle.auth seq id 2: 2
pdbx validate rmsd angle.auth seq id 3: 2
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_angle/9
type: pdbx validate rmsd angle
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd angle.id: 9
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: 3.56
pdbx validate rmsd angle.angle standard deviation: 0.4
pdbx validate rmsd angle.angle target value: 105.8
pdbx validate rmsd angle.angle value: 109.36
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: C8
pdbx validate rmsd angle.auth atom id 2: N9
pdbx validate rmsd angle.auth atom id 3: C4
pdbx validate rmsd angle.auth comp id 1: A
pdbx validate rmsd angle.auth comp id 2: A
pdbx validate rmsd angle.auth comp id 3: A
pdbx validate rmsd angle.auth seq id 1: 2
pdbx validate rmsd angle.auth seq id 2: 2
pdbx validate rmsd angle.auth seq id 3: 2
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_angle/10
type: pdbx validate rmsd angle
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd angle.id: 10
pdbx validate rmsd angle.pdb model num: 1
pdbx validate rmsd angle.angle deviation: -2.5
pdbx validate rmsd angle.angle standard deviation: 0.4
pdbx validate rmsd angle.angle target value: 105.8
pdbx validate rmsd angle.angle value: 103.3
pdbx validate rmsd angle.auth asym id 1: A
pdbx validate rmsd angle.auth asym id 2: A
pdbx validate rmsd angle.auth asym id 3: A
pdbx validate rmsd angle.auth atom id 1: N9
pdbx validate rmsd angle.auth atom id 2: C4
pdbx validate rmsd angle.auth atom id 3: C5
pdbx validate rmsd angle.auth comp id 1: A
pdbx validate rmsd angle.auth comp id 2: A
pdbx validate rmsd angle.auth comp id 3: A
pdbx validate rmsd angle.auth seq id 1: 2
pdbx validate rmsd angle.auth seq id 2: 2
pdbx validate rmsd angle.auth seq id 3: 2
pdbx validate rmsd angle.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_bond/1
type: pdbx validate rmsd bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd bond.id: 1
pdbx validate rmsd bond.pdb model num: 1
pdbx validate rmsd bond.auth asym id 1: A
pdbx validate rmsd bond.auth asym id 2: A
pdbx validate rmsd bond.auth atom id 1: O5'
pdbx validate rmsd bond.auth atom id 2: C5'
pdbx validate rmsd bond.auth comp id 1: A
pdbx validate rmsd bond.auth comp id 2: A
pdbx validate rmsd bond.auth seq id 1: 1
pdbx validate rmsd bond.auth seq id 2: 1
pdbx validate rmsd bond.bond deviation: -0.071
pdbx validate rmsd bond.bond standard deviation: 0.009
pdbx validate rmsd bond.bond target value: 1.42
pdbx validate rmsd bond.bond value: 1.349
pdbx validate rmsd bond.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_bond/2
type: pdbx validate rmsd bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd bond.id: 2
pdbx validate rmsd bond.pdb model num: 1
pdbx validate rmsd bond.auth asym id 1: A
pdbx validate rmsd bond.auth asym id 2: A
pdbx validate rmsd bond.auth atom id 1: O3'
pdbx validate rmsd bond.auth atom id 2: C3'
pdbx validate rmsd bond.auth comp id 1: A
pdbx validate rmsd bond.auth comp id 2: A
pdbx validate rmsd bond.auth seq id 1: 1
pdbx validate rmsd bond.auth seq id 2: 1
pdbx validate rmsd bond.bond deviation: -0.09
pdbx validate rmsd bond.bond standard deviation: 0.014
pdbx validate rmsd bond.bond target value: 1.417
pdbx validate rmsd bond.bond value: 1.327
pdbx validate rmsd bond.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_bond/3
type: pdbx validate rmsd bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd bond.id: 3
pdbx validate rmsd bond.pdb model num: 1
pdbx validate rmsd bond.auth asym id 1: A
pdbx validate rmsd bond.auth asym id 2: A
pdbx validate rmsd bond.auth atom id 1: C2'
pdbx validate rmsd bond.auth atom id 2: O2'
pdbx validate rmsd bond.auth comp id 1: A
pdbx validate rmsd bond.auth comp id 2: A
pdbx validate rmsd bond.auth seq id 1: 1
pdbx validate rmsd bond.auth seq id 2: 1
pdbx validate rmsd bond.bond deviation: 0.087
pdbx validate rmsd bond.bond standard deviation: 0.01
pdbx validate rmsd bond.bond target value: 1.42
pdbx validate rmsd bond.bond value: 1.507
pdbx validate rmsd bond.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_bond/4
type: pdbx validate rmsd bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd bond.id: 4
pdbx validate rmsd bond.pdb model num: 1
pdbx validate rmsd bond.auth asym id 1: A
pdbx validate rmsd bond.auth asym id 2: A
pdbx validate rmsd bond.auth atom id 1: N1
pdbx validate rmsd bond.auth atom id 2: C2
pdbx validate rmsd bond.auth comp id 1: A
pdbx validate rmsd bond.auth comp id 2: A
pdbx validate rmsd bond.auth seq id 1: 1
pdbx validate rmsd bond.auth seq id 2: 1
pdbx validate rmsd bond.bond deviation: 0.075
pdbx validate rmsd bond.bond standard deviation: 0.009
pdbx validate rmsd bond.bond target value: 1.339
pdbx validate rmsd bond.bond value: 1.414
pdbx validate rmsd bond.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_rmsd_bond/5
type: pdbx validate rmsd bond
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate rmsd bond.id: 5
pdbx validate rmsd bond.pdb model num: 1
pdbx validate rmsd bond.auth asym id 1: A
pdbx validate rmsd bond.auth asym id 2: A
pdbx validate rmsd bond.auth atom id 1: C6
pdbx validate rmsd bond.auth atom id 2: N6
pdbx validate rmsd bond.auth comp id 1: A
pdbx validate rmsd bond.auth comp id 2: A
pdbx validate rmsd bond.auth seq id 1: 1
pdbx validate rmsd bond.auth seq id 2: 1
pdbx validate rmsd bond.bond deviation: -0.104
pdbx validate rmsd bond.bond standard deviation: 0.008
pdbx validate rmsd bond.bond target value: 1.335
pdbx validate rmsd bond.bond value: 1.231
pdbx validate rmsd bond.linker flag: N

http://rdf.wwpdb.org/pdb/5K8H/pdbx_validate_symm_contact/1
type: pdbx validate symm contact
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
pdbx validate symm contact.id: 1
pdbx validate symm contact.pdb model num: 1
pdbx validate symm contact.auth asym id 1: A
pdbx validate symm contact.auth asym id 2: A
pdbx validate symm contact.auth atom id 1: P
pdbx validate symm contact.auth atom id 2: O3'
pdbx validate symm contact.auth comp id 1: A
pdbx validate symm contact.auth comp id 2: A
pdbx validate symm contact.auth seq id 1: 1
pdbx validate symm contact.auth seq id 2: 2
pdbx validate symm contact.dist: 1.63
pdbx validate symm contact.site symmetry 1: 1_555
pdbx validate symm contact.site symmetry 2: 4_754

5K8H,X-RAY DIFFRACTION
type: refine
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entry: 5K8H
refine.entry id: 5K8H
refine.pdbx refine id: X-RAY DIFFRACTION
refine.ls r factor r free: 0.108
refine.ls r factor r work: 0.1061
refine.ls r factor obs: 0.1063
refine.ls d res high: 1.069
refine.ls d res low: 15.028
refine.ls number reflns r free: 146
refine.ls number reflns r work: 1473
refine.ls number reflns obs: 1619
refine.ls percent reflns r free: 9.02
refine.ls percent reflns obs: 94.84
refine.pdbx diffrn id: 1
refine.pdbx ls cross valid method: FREE R-VALUE
refine.pdbx method to determine struct: MOLECULAR REPLACEMENT
refine.pdbx starting model: rA2 section of the 4JRD

LAST,X-RAY DIFFRACTION
type: refine hist
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
refine hist.cycle id: LAST
refine hist.pdbx refine id: X-RAY DIFFRACTION
refine hist.d res high: 1.069
refine hist.d res low: 15.028
refine hist.number atoms solvent: 8
refine hist.number atoms total: 53
refine hist.pdbx number atoms ligand: 1
refine hist.pdbx number atoms nucleic acid: 44
refine hist.pdbx number atoms protein: 0

1.069,X-RAY DIFFRACTION
type: refine ls shell
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
refine ls shell.d res high: 1.069
refine ls shell.pdbx refine id: X-RAY DIFFRACTION
refine ls shell.r factor r free: 0.3975
refine ls shell.r factor r work: 0.318
refine ls shell.r factor obs: 0.318
refine ls shell.d res low: 1.107

http://rdf.wwpdb.org/pdb/5K8H/reflns/1
type: reflns
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entry: 5K8H
reflns.pdbx ordinal: 1
reflns.d resolution high: 1.069
reflns.d resolution low: 21.25
reflns.entry id: 5K8H
reflns.number obs: 1679
reflns.pdbx CC half: 0.994
reflns.pdbx rmerge i obs: 0.127
reflns.pdbx rpim i all: 0.032
reflns.pdbx diffrn id: 1
reflns.pdbx net i over sigma i: 15
reflns.pdbx redundancy: 19.3
reflns.percent possible obs: 97.6

http://rdf.wwpdb.org/pdb/5K8H/reflns_shell/1
type: reflns shell
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reflns shell.pdbx ordinal: 1
reflns shell.rmerge i obs: 1.059
reflns shell.d res high: 1.069
reflns shell.d res low: 1.14
reflns shell.mean i over sig i obs: 3.1
reflns shell.number unique all: 247
reflns shell.pdbx CC half: 0.987
reflns shell.pdbx rpim i all: 0.333
reflns shell.pdbx diffrn id: 1
reflns shell.pdbx redundancy: 8.9
reflns shell.percent possible all: 87.2

http://rdf.wwpdb.org/pdb/5K8H/software/1
type: software
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
software.pdbx ordinal: 1
software.classification: refinement
software.name: PHENIX
software.version: (1.10.1_2155: ???)

http://rdf.wwpdb.org/pdb/5K8H/software/2
type: software
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
software.pdbx ordinal: 2
software.classification: data reduction
software.name: XDS

http://rdf.wwpdb.org/pdb/5K8H/software/3
type: software
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
software.pdbx ordinal: 3
software.classification: data scaling
software.name: Aimless

http://rdf.wwpdb.org/pdb/5K8H/software/4
type: software
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
software.pdbx ordinal: 4
software.classification: phasing
software.name: PHENIX

5K8H
type: struct
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entry: 5K8H
struct.entry id: 5K8H
struct.pdbx CASP flag: N
struct.title: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH

http://rdf.wwpdb.org/pdb/5K8H/struct_asym/B
type: struct asym
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entity: http://rdf.wwpdb.org/pdb/5K8H/entity/2
struct asym.id: B
struct asym.entity id: 2
struct asym.pdbx blank PDB chainid flag: N
struct asym.pdbx modified: N

http://rdf.wwpdb.org/pdb/5K8H/struct_asym/C
type: struct asym
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entity: http://rdf.wwpdb.org/pdb/5K8H/entity/3
struct asym.id: C
struct asym.entity id: 3
struct asym.pdbx blank PDB chainid flag: N
struct asym.pdbx modified: N

http://rdf.wwpdb.org/pdb/5K8H/struct_biol/1
type: struct biol
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
struct biol.id: 1
struct biol.details: The asymmetric unit is rA2, however the input RNA polymer is rA7, and this forms a continual parallel poly(rA) double helix structure. This structure is referred to as a "staggered zipper" since the rA7 strands overlap in a many different registers relative to their opposite, paired strands, to form the helix.

hydrog1
type: struct conn
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to struct conn type: hydrog
struct conn.id: hydrog1
struct conn.conn type id: hydrog
struct conn.details: TYPE_2_PAIR
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: A
struct conn.ptnr1 auth seq id: 1
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N6
struct conn.ptnr1 label comp id: A
struct conn.ptnr1 label seq id: 2
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: A
struct conn.ptnr2 auth comp id: A
struct conn.ptnr2 auth seq id: 1
struct conn.ptnr2 label asym id: A
struct conn.ptnr2 label atom id: N7
struct conn.ptnr2 label comp id: A
struct conn.ptnr2 label seq id: 2
struct conn.ptnr2 symmetry: 2_835

hydrog
referenced by struct conn: hydrog1
referenced by struct conn: hydrog2
referenced by struct conn: hydrog3
referenced by struct conn: hydrog4
type: struct conn type
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
struct conn type.id: hydrog

hydrog2
type: struct conn
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to struct conn type: hydrog
struct conn.id: hydrog2
struct conn.conn type id: hydrog
struct conn.details: TYPE_2_PAIR
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: A
struct conn.ptnr1 auth seq id: 1
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N7
struct conn.ptnr1 label comp id: A
struct conn.ptnr1 label seq id: 2
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: A
struct conn.ptnr2 auth comp id: A
struct conn.ptnr2 auth seq id: 1
struct conn.ptnr2 label asym id: A
struct conn.ptnr2 label atom id: N6
struct conn.ptnr2 label comp id: A
struct conn.ptnr2 label seq id: 2
struct conn.ptnr2 symmetry: 2_835

hydrog3
type: struct conn
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to struct conn type: hydrog
struct conn.id: hydrog3
struct conn.conn type id: hydrog
struct conn.details: TYPE_2_PAIR
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: A
struct conn.ptnr1 auth seq id: 2
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N6
struct conn.ptnr1 label comp id: A
struct conn.ptnr1 label seq id: 3
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: A
struct conn.ptnr2 auth comp id: A
struct conn.ptnr2 auth seq id: 2
struct conn.ptnr2 label asym id: A
struct conn.ptnr2 label atom id: N7
struct conn.ptnr2 label comp id: A
struct conn.ptnr2 label seq id: 3
struct conn.ptnr2 symmetry: 2_835

hydrog4
type: struct conn
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to struct conn type: hydrog
struct conn.id: hydrog4
struct conn.conn type id: hydrog
struct conn.details: TYPE_2_PAIR
struct conn.ptnr1 auth asym id: A
struct conn.ptnr1 auth comp id: A
struct conn.ptnr1 auth seq id: 2
struct conn.ptnr1 label asym id: A
struct conn.ptnr1 label atom id: N7
struct conn.ptnr1 label comp id: A
struct conn.ptnr1 label seq id: 3
struct conn.ptnr1 symmetry: 1_555
struct conn.ptnr2 auth asym id: A
struct conn.ptnr2 auth comp id: A
struct conn.ptnr2 auth seq id: 2
struct conn.ptnr2 label asym id: A
struct conn.ptnr2 label atom id: N6
struct conn.ptnr2 label comp id: A
struct conn.ptnr2 label seq id: 3
struct conn.ptnr2 symmetry: 2_835

5K8H
type: struct keywords
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entry: 5K8H
struct keywords.entry id: 5K8H
struct keywords.pdbx keywords: RNA
struct keywords.text: parallel double-helix poly(rA) acidic pH adenine N1 protonation, RNA

http://rdf.wwpdb.org/pdb/5K8H/struct_ref/1
type: struct ref
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entity: http://rdf.wwpdb.org/pdb/5K8H/entity/1
struct ref.id: 1
struct ref.db code: 5K8H
struct ref.db name: PDB
struct ref.entity id: 1
struct ref.pdbx align begin: 1
struct ref.pdbx db accession: 5K8H
referenced by struct ref seq: http://rdf.wwpdb.org/pdb/5K8H/struct_ref_seq/1

http://rdf.wwpdb.org/pdb/5K8H/struct_ref_seq/1
type: struct ref seq
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to struct ref: http://rdf.wwpdb.org/pdb/5K8H/struct_ref/1
struct ref seq.align id: 1
struct ref seq.db align beg: 0
struct ref seq.db align end: 6
struct ref seq.pdbx PDB id code: 5K8H
struct ref seq.pdbx auth seq align beg: 0
struct ref seq.pdbx auth seq align end: 6
struct ref seq.pdbx db accession: 5K8H
struct ref seq.pdbx strand id: A
struct ref seq.ref id: 1
struct ref seq.seq align beg: 1
struct ref seq.seq align end: 7

AC1
type: struct site
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
struct site.id: AC1
struct site.details: binding site for residue NH4 A 101
struct site.pdbx auth asym id: A
struct site.pdbx auth comp id: NH4
struct site.pdbx auth seq id: 101
struct site.pdbx evidence code: Software
struct site.pdbx num residues: 4
referenced by struct site gen: 4,AC1
referenced by struct site gen: 1,AC1
referenced by struct site gen: 2,AC1
referenced by struct site gen: 3,AC1

1,AC1
type: struct site gen
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to struct site: AC1
struct site gen.id: 1
struct site gen.site id: AC1
struct site gen.auth asym id: A
struct site gen.auth comp id: A
struct site gen.auth seq id: 1
struct site gen.label asym id: A
struct site gen.label comp id: A
struct site gen.label seq id: 2
struct site gen.pdbx num res: 4
struct site gen.symmetry: 7_736

2,AC1
type: struct site gen
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to struct site: AC1
struct site gen.id: 2
struct site gen.site id: AC1
struct site gen.auth asym id: A
struct site gen.auth comp id: A
struct site gen.auth seq id: 1
struct site gen.label asym id: A
struct site gen.label comp id: A
struct site gen.label seq id: 2
struct site gen.pdbx num res: 4
struct site gen.symmetry: 4_755

3,AC1
type: struct site gen
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to struct site: AC1
struct site gen.id: 3
struct site gen.site id: AC1
struct site gen.auth asym id: A
struct site gen.auth comp id: A
struct site gen.auth seq id: 1
struct site gen.label asym id: A
struct site gen.label comp id: A
struct site gen.label seq id: 2
struct site gen.pdbx num res: 4
struct site gen.symmetry: 1_555

4,AC1
type: struct site gen
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to struct site: AC1
struct site gen.id: 4
struct site gen.site id: AC1
struct site gen.auth asym id: A
struct site gen.auth comp id: A
struct site gen.auth seq id: 2
struct site gen.label asym id: A
struct site gen.label comp id: A
struct site gen.label seq id: 3
struct site gen.pdbx num res: 4
struct site gen.symmetry: 1_555

5K8H
type: symmetry
of datablock: The X-ray crystal structure of a parallel poly(rA) double helix generated by rA7 at acidic pH
reference to entry: 5K8H
symmetry.entry id: 5K8H
symmetry.int tables number: 94
symmetry.space group name H-M: P 42 21 2